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MELO3C030096 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030096
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr03:8434500..8440972
RNA-Seq ExpressionMELO3C030096
SyntenyMELO3C030096
Gene Ontology termsGO:0006820 - anion transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051186.1 uncharacterized protein E6C27_scaffold511G001450 [Cucumis melo var. makuwa]3.9e-0847.5Show/hide
Query:  MEYFVWLKSQG-------------------------------------NGKGRGKLASDREGSVTCHMETQFCFRVYVSI
        MEYFVWLKS G                                      GKGRGKLA+DREGSVTCHM TQFCFRVYVS+
Subjt:  MEYFVWLKSQG-------------------------------------NGKGRGKLASDREGSVTCHMETQFCFRVYVSI

KAA0059503.1 hypothetical protein E6C27_scaffold518G00070 [Cucumis melo var. makuwa]1.0e-0893.94Show/hide
Query:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSI
        G GKGRGKLASDREGSVTCHMETQFCFRVYVS+
Subjt:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSI

KAA0063432.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.0e-0878.05Show/hide
Query:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYAC
        G GKGRGKLAS+REGSVTCHM TQFCFRVYVS+ + QL  C
Subjt:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYAC

KAA0063966.1 hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]1.7e-0891.18Show/hide
Query:  QGNGKGRGKLASDREGSVTCHMETQFCFRVYVSI
        QG GKGRGKLASDREGSVTCHM TQFCFRVYVS+
Subjt:  QGNGKGRGKLASDREGSVTCHMETQFCFRVYVSI

TYK11698.1 Retrotransposon protein [Cucumis melo var. makuwa]3.5e-0946.15Show/hide
Query:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYACDHPYPLPNHYQCIPGPHNYKNRIVHVITYHTVDVSKN
        G GKGRGKLASDREGSVTCHM TQFCFRVYVS+    ++  +  +PL + +  +     Y     HV+ +  + +++N
Subjt:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYACDHPYPLPNHYQCIPGPHNYKNRIVHVITYHTVDVSKN

TrEMBL top hitse value%identityAlignment
A0A5A7UUC1 Uncharacterized protein4.9e-0993.94Show/hide
Query:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSI
        G GKGRGKLASDREGSVTCHMETQFCFRVYVS+
Subjt:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSI

A0A5A7V596 Retrotransposon gag protein4.9e-0978.05Show/hide
Query:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYAC
        G GKGRGKLAS+REGSVTCHM TQFCFRVYVS+ + QL  C
Subjt:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYAC

A0A5A7VC05 Uncharacterized protein8.4e-0991.18Show/hide
Query:  QGNGKGRGKLASDREGSVTCHMETQFCFRVYVSI
        QG GKGRGKLASDREGSVTCHM TQFCFRVYVS+
Subjt:  QGNGKGRGKLASDREGSVTCHMETQFCFRVYVSI

A0A5D3CKK9 Retrotransposon protein1.7e-0946.15Show/hide
Query:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYACDHPYPLPNHYQCIPGPHNYKNRIVHVITYHTVDVSKN
        G GKGRGKLASDREGSVTCHM TQFCFRVYVS+    ++  +  +PL + +  +     Y     HV+ +  + +++N
Subjt:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYACDHPYPLPNHYQCIPGPHNYKNRIVHVITYHTVDVSKN

A0A5D3D8J0 Uncharacterized protein1.9e-0890.91Show/hide
Query:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSI
        G GKGRGKLASDREGSVTCHM TQFCFRVYVS+
Subjt:  GNGKGRGKLASDREGSVTCHMETQFCFRVYVSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTACTTTGTTTGGCTAAAATCTCAAGGTAATGGTAAAGGTAGAGGCAAGCTGGCGAGCGACAGAGAAGGATCCGTGACATGCCATATGGAGACTCAGTTTTGCTT
CCGCGTCTATGTTTCAATAACAAATAATCAGTTGTACGCTTGTGATCATCCTTATCCCCTCCCAAATCACTATCAGTGTATCCCAGGACCTCATAATTATAAAAACAGAA
TAGTGCATGTTATAACTTATCATACTGTTGATGTATCAAAGAATTCTCTTTGCTACCTTCAAATTAGTGGTCACCAAGCATTAAGGCCAAGTTGGGCTAAGCAAGCGATC
AAGCTAAAGTTGAAAGACTTAAGTGAGCATTTTGACGTTTCACTTGAGGCGCCAGGGCTGCTTATGTTACGTGTTGTAGGACAGGAATTAAGTTAG
mRNA sequenceShow/hide mRNA sequence
TGAGAAGTTAATTAATTTGGGAGAATTTTTTGATGTTAGCCAATTGCTAATTTCATTAATTAAGATACTGAGTTTTTCTTTTATGATTAGGATCAAGTTAATTAGAGATT
ATTTTTACTGTCCTCTATGGAGTACTTTGTTTGGCTAAAATCTCAAGGTAATGGTAAAGGTAGAGGCAAGCTGGCGAGCGACAGAGAAGGATCCGTGACATGCCATATGG
AGACTCAGTTTTGCTTCCGCGTCTATGTTTCAATAACAAATAATCAGTTGTACGCTTGTGATCATCCTTATCCCCTCCCAAATCACTATCAGTGTATCCCAGGACCTCAT
AATTATAAAAACAGAATAGTGCATGTTATAACTTATCATACTGTTGATGTATCAAAGAATTCTCTTTGCTACCTTCAAATTAGTGGTCACCAAGCATTAAGGCCAAGTTG
GGCTAAGCAAGCGATCAAGCTAAAGTTGAAAGACTTAAGTGAGCATTTTGACGTTTCACTTGAGGCGCCAGGGCTGCTTATGTTACGTGTTGTAGGACAGGAATTAAGTT
AGGGTTTGCGTTGCTTTTCTTTAACCTACTAGCAGCCGCCTCCGTTCCTTCCCTCAATATCTCTCATCTCACATCTCTTCTTCCATCTCTACGTCTCGTATCTCTACGAT
CTCACCACATCTCTTCTTCCATATTTTCCTTTTAATCATCCTTGCTTTTCTCGCATCGCTTTTCGGTACATCTCTTCTTCCATCTCTACAAAAACTTAAGTAG
Protein sequenceShow/hide protein sequence
MEYFVWLKSQGNGKGRGKLASDREGSVTCHMETQFCFRVYVSITNNQLYACDHPYPLPNHYQCIPGPHNYKNRIVHVITYHTVDVSKNSLCYLQISGHQALRPSWAKQAI
KLKLKDLSEHFDVSLEAPGLLMLRVVGQELS