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MELO3C030116 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030116
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr03:9306628..9307616
RNA-Seq ExpressionMELO3C030116
SyntenyMELO3C030116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033258.1 reverse transcriptase [Cucumis melo var. makuwa]1.5e-0460Show/hide
Query:  MLSFSSSFDEIDAI--EFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQK
        M SF S F+E D I  EF+EDLNN   GSS + +NS REYIEV+KG+LQ+
Subjt:  MLSFSSSFDEIDAI--EFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQK
KAA0036188.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.6e-0665.31Show/hide
Query:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQ
        M SFSS F+E+DA  +EF+E+L+N   GSSS+ DNSGREYIE +KGNLQ
Subjt:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQ
KAA0054614.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.1e-0560Show/hide
Query:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQK
        MLSF   FDE D+  +EF EDL+N   GSSS+DDN GREYI+V+KG+L++
Subjt:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQK
TYK19866.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.5e-0767.35Show/hide
Query:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQ
        M SFSS FDEIDA  +EF E+L+N +GG SS+ DNS REYIEV+KG+LQ
Subjt:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQ
TrEMBL top hitse value%identityAlignment
A0A5A7SRT8 Reverse transcriptase7.3e-0560Show/hide
Query:  MLSFSSSFDEIDAI--EFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQK
        M SF S F+E D I  EF+EDLNN   GSS + +NS REYIEV+KG+LQ+
Subjt:  MLSFSSSFDEIDAI--EFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQK
A0A5A7T023 NBS-LRR type resistance protein1.7e-0665.31Show/hide
Query:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQ
        M SFSS F+E+DA  +EF+E+L+N   GSSS+ DNSGREYIE +KGNLQ
Subjt:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQ
A0A5D3D8F4 CACTA en-spm transposon protein4.6e-0767.35Show/hide
Query:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQ
        M SFSS FDEIDA  +EF E+L+N +GG SS+ DNS REYIEV+KG+LQ
Subjt:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQ
A0A5D3DUW9 CACTA en-spm transposon protein1.5e-0560Show/hide
Query:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQK
        MLSF   FDE D+  +EF EDL+N   GSSS+DDN GREYI+V+KG+L++
Subjt:  MLSFSSSFDEIDA--IEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCATTCTCGAGCAGTTTCGATGAGATAGATGCGATTGAGTTCATTGAGGATCTAAATAACAATGTTGGTGGGTCATCATCGATGGACGACAATTCGGGA
AGAGAATACATTGAGGTCATCAAGGGTAACCTACAGAAGCTATGCTTCACCCTTTTTCCAAAAACTCTAAGAAACGAGATGAAAATATGGGAAATCTCCTTAGAT
AATAAGGAGAAGGATATAGAGAATAGACACAACGCGTGGAGTAGGCTTAACAAAGTAACACAACAAACTATTGATGTTGTGTTTGTTAGCGATATGCTCAAAAGT
ACATACAATAAGATAAAGATTACATTGGGCTTAATGGCTAGAAATTATAAAGAATGGGATGACAACAATTTGACAAAAATGCAATGGTGGCACTTCAAGGCCAAA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATCATTCTCGAGCAGTTTCGATGAGATAGATGCGATTGAGTTCATTGAGGATCTAAATAACAATGTTGGTGGGTCATCATCGATGGACGACAATTCGGGA
AGAGAATACATTGAGGTCATCAAGGGTAACCTACAGAAGCTATGCTTCACCCTTTTTCCAAAAACTCTAAGAAACGAGATGAAAATATGGGAAATCTCCTTAGAT
AATAAGGAGAAGGATATAGAGAATAGACACAACGCGTGGAGTAGGCTTAACAAAGTAACACAACAAACTATTGATGTTGTGTTTGTTAGCGATATGCTCAAAAGT
ACATACAATAAGATAAAGATTACATTGGGCTTAATGGCTAGAAATTATAAAGAATGGGATGACAACAATTTGACAAAAATGCAATGGTGGCACTTCAAGGCCAAA
TGA
Protein sequenceShow/hide protein sequence
MLSFSSSFDEIDAIEFIEDLNNNVGGSSSMDDNSGREYIEVIKGNLQKLCFTLFPKTLRNEMKIWEISLDNKEKDIENRHNAWSRLNKVTQQTIDVVFVSDMLKS
TYNKIKITLGLMARNYKEWDDNNLTKMQWWHFKAK