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MELO3C030134 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030134
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionU11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1
Genome locationchr03:10628581..10631122
RNA-Seq ExpressionMELO3C030134
SyntenyMELO3C030134
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037113.1 hypothetical protein E6C27_scaffold379G00140 [Cucumis melo var. makuwa]1.0e-1683.33Show/hide
Query:  LDKEERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNPIFKSLSTMEGSCITSERAIY
        + +EERQALAAAD +A KDAIA  EVSRKTIPTYPESRNPIFKSLSTMEGSCITSER  Y
Subjt:  LDKEERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNPIFKSLSTMEGSCITSERAIY

KAA0048935.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis melo var. makuwa]2.0e-1272.13Show/hide
Query:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP
        K+Q  FLPEE+DKFL+K       EERQALAAADT+A KDAIA AEVSRKT+PTYPESR+P
Subjt:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP

XP_008437978.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Cucumis melo]2.0e-1272.13Show/hide
Query:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP
        K+Q  FLPEE+DKFL+K       EERQALAAADT+A KDAIA AEVSRKT+PTYPESR+P
Subjt:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP

XP_016899131.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucumis melo]2.0e-1272.13Show/hide
Query:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP
        K+Q  FLPEE+DKFL+K       EERQALAAADT+A KDAIA AEVSRKT+PTYPESR+P
Subjt:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP

XP_031737698.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucumis sativus]2.0e-1272.13Show/hide
Query:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP
        K+Q  FLPEE+DKFL+K       EERQALAAADT+A KDAIA AEVSRKT+PTYPESR+P
Subjt:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP

TrEMBL top hitse value%identityAlignment
A0A0A0L417 Uncharacterized protein9.8e-1372.13Show/hide
Query:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP
        K+Q  FLPEE+DKFL+K       EERQALAAADT+A KDAIA AEVSRKT+PTYPESR+P
Subjt:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP

A0A1S3AVD0 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X19.8e-1372.13Show/hide
Query:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP
        K+Q  FLPEE+DKFL+K       EERQALAAADT+A KDAIA AEVSRKT+PTYPESR+P
Subjt:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP

A0A5A7U5M4 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X19.8e-1372.13Show/hide
Query:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP
        K+Q  FLPEE+DKFL+K       EERQALAAADT+A KDAIA AEVSRKT+PTYPESR+P
Subjt:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP

A0A5D3CQ23 Uncharacterized protein5.0e-1783.33Show/hide
Query:  LDKEERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNPIFKSLSTMEGSCITSERAIY
        + +EERQALAAAD +A KDAIA  EVSRKTIPTYPESRNPIFKSLSTMEGSCITSER  Y
Subjt:  LDKEERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNPIFKSLSTMEGSCITSERAIY

A0A5D3D0C0 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X19.8e-1372.13Show/hide
Query:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP
        K+Q  FLPEE+DKFL+K       EERQALAAADT+A KDAIA AEVSRKT+PTYPESR+P
Subjt:  KRQSQFLPEENDKFLDK-------EERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGATATGGTATTGTTCATGTTGAATTTATCACTAAAAACGTTTGTTGTAAGAGACAAAGTCAATTTCTACCAGAGGAGAATGATAAGTTTCTAGATAAGGAGGAA
CGTCAAGCCCTTGCTGCAGCTGATACAAATGCTACCAAGGATGCCATTGCTATTGCTGAGGTCTCTAGGAAGACTATTCCAACTTACCCCGAATCAAGGAATCCA
ATATTTAAGTCTCTATCAACCATGGAAGGAAGTTGCATTACGTCAGAGAGAGCTATTTACCCAAGGCATACTGGAAATGTTTTTCATTCTGTTGCCACATTTTTT
AGCCAGCTTATGGTAGCAATAGGAGAAAATACCGCGAGCCCTAGTGTGCTTGACATTGAGTTTAGGGAATCTGCTAATGAACAGAGACGGAGAATGATTGAAGTC
ATATCGGGTTGA
mRNA sequenceShow/hide mRNA sequence
AGGATATGGTATTGTTCATGTTGAATTTATCACTAAAAACGTTTGTTGTAAGAGACAAAGTCAATTTCTACCAGAGGAGAATGATAAGTTTCTAGATAAGGAGGA
ACGTCAAGCCCTTGCTGCAGCTGATACAAATGCTACCAAGGATGCCATTGCTATTGCTGAGGTCTCTAGGAAGACTATTCCAACTTACCCCGAATCAAGGAATCC
AATATTTAAGTCTCTATCAACCATGGAAGGAAGTTGCATTACGTCAGAGAGAGCTATTTACCCAAGGCATACTGGAAATGTTTTTCATTCTGTTGCCACATTTTT
TAGCCAGCTTATGGTAGCAATAGGAGAAAATACCGCGAGCCCTAGTGTGCTTGACATTGAGTTTAGGGAATCTGCTAATGAACAGAGACGGAGAATGATTGAAGT
CATATCGGGTTGAAAGCTAAGCAACT
Protein sequenceShow/hide protein sequence
GYGIVHVEFITKNVCCKRQSQFLPEENDKFLDKEERQALAAADTNATKDAIAIAEVSRKTIPTYPESRNPIFKSLSTMEGSCITSERAIYPRHTGNVFHSVATFF
SQLMVAIGENTASPSVLDIEFRESANEQRRRMIEVISG