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MELO3C030146 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030146
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionSWIM-type domain-containing protein
Genome locationchr03:11590506..11591136
RNA-Seq ExpressionMELO3C030146
SyntenyMELO3C030146
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051992.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.5e-0950.56Show/hide
Query:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP
        +++ QI L + +KVN VNN+KYQVINGTSQYVIYLPT                             KS+VSPLYLNS LSS YR VINP
Subjt:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP

TYK07957.1 hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]8.9e-0741.56Show/hide
Query:  KVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP
        +V+P++  +YQV NG  Q+++ L  +  SCR+ D+ EIP AHA  V  M +L   SYVS  Y    LS  Y   I P
Subjt:  KVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP

XP_008465177.1 PREDICTED: uncharacterized protein LOC103502841 [Cucumis melo]6.2e-1676.19Show/hide
Query:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKH
        I++ QI L + +KVNPVNNMKYQVI+G SQYVIYLPTKV SCRM DILEIP AH CAVF MKH
Subjt:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKH

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]3.1e-0741.25Show/hide
Query:  KPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP
        +  KV+P+NN +Y+VI+G + +++ L  K  SCR+ D++EIP AHACAV    +L I ++V   Y  S L S Y+  + P
Subjt:  KPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP

XP_038889210.1 uncharacterized protein LOC120079095 [Benincasa hispida]6.8e-0739.24Show/hide
Query:  KVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINPFK
        +V+P+NN +Y+V++G + ++  L  K  SCR+ D++EIP AHACA+    +L I ++VS  Y +S L S Y+  + P +
Subjt:  KVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINPFK

TrEMBL top hitse value%identityAlignment
A0A1S3CNA2 uncharacterized protein LOC1035028413.0e-1676.19Show/hide
Query:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKH
        I++ QI L + +KVNPVNNMKYQVI+G SQYVIYLPTKV SCRM DILEIP AH CAVF MKH
Subjt:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKH

A0A5A7SWF3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like9.6e-0780Show/hide
Query:  KPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRM
        K ++VNPVNNMKY+VI+GTSQYVIYLPTKV SC+M
Subjt:  KPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRM

A0A5D3C2C0 Protein FAR1-RELATED SEQUENCE 3-like1.2e-0950.56Show/hide
Query:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP
        +++ QI L + +KVN VNN+KYQVINGTSQYVIYLPT                             KS+VSPLYLNS LSS YR VINP
Subjt:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP

A0A5D3C7L7 Uncharacterized protein4.3e-0741.56Show/hide
Query:  KVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP
        +V+P++  +YQV NG  Q+++ L  +  SCR+ D+ EIP AHA  V  M +L   SYVS  Y    LS  Y   I P
Subjt:  KVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINP

A0A5D3CGP0 SWIM-type domain-containing protein3.0e-1676.19Show/hide
Query:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKH
        I++ QI L + +KVNPVNNMKYQVI+G SQYVIYLPTKV SCRM DILEIP AH CAVF MKH
Subjt:  IIKSQI-LPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGATTATCAAGTCACAGATTTTACCAAAACCATTGAAGGTTAATCCGGTTAATAACATGAAATACCAAGTCATAAATGGAACTTCCCAATATGTGATTTACTT
ACCTACGAAGGTTTATAGTTGCAGGATGAGGGATATATTGGAAATACCTTATGCGCATGCATGTGCTGTTTTCATCATGAAACATTTATCAATTAAGTCATATGTCTCAC
CTCTTTACTTAAACAGCATTTTGAGTTCAATATATAGAGACGTTATAAATCCCTTTAAGCGATCATTGACAATGGCAAATACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGATTATCAAGTCACAGATTTTACCAAAACCATTGAAGGTTAATCCGGTTAATAACATGAAATACCAAGTCATAAATGGAACTTCCCAATATGTGATTTACTT
ACCTACGAAGGTTTATAGTTGCAGGATGAGGGATATATTGGAAATACCTTATGCGCATGCATGTGCTGTTTTCATCATGAAACATTTATCAATTAAGTCATATGTCTCAC
CTCTTTACTTAAACAGCATTTTGAGTTCAATATATAGAGACGTTATAAATCCCTTTAAGCGATCATTGACAATGGCAAATACCTGATGATATTATGTTCATTGTCATCCT
TCCACCTAATGTAAATCGTGCAGTCGATCGACCGAAGAAGATTAGAATTCCTTAAAAAATGGAGCTCAAGAGATGCGTTAAATGTGACCGTTGTAGACGTGTTGGTCATA
ACCGAGATGCAAGTTTTTCTTATTGAACTAGATTAATCGTGATTTATTATGTTTTA
Protein sequenceShow/hide protein sequence
MKLIIKSQILPKPLKVNPVNNMKYQVINGTSQYVIYLPTKVYSCRMRDILEIPYAHACAVFIMKHLSIKSYVSPLYLNSILSSIYRDVINPFKRSLTMANT