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MELO3C030177 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030177
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr01:7237797..7238454
RNA-Seq ExpressionMELO3C030177
SyntenyMELO3C030177
Gene Ontology termsGO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046819.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-5981.56Show/hide
Query:  MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSE
        + DR R TG+FAETF DV SNE GGY+GFDM DGNE+FPP+TGSSGSKRKRG+QR+VDVEGIHLAL+QTNEQLRMIAEWP  AL NDNHV T+FF IL E
Subjt:  MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSE

Query:  MPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVL
        MPELTSLD ALLQRHLLS MDDL+GF+LMPEDEREGFCRVL
Subjt:  MPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVL

KAA0059933.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-5775.93Show/hide
Query:  RTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPV------------------------TGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPA
        R TGQFAETFTDV SNE GGYEGFDMADGNEEFP V                        TGSSGSKRKRGSQREVDVEGIHLAL+QTNEQLRMI EWPA
Subjt:  RTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPV------------------------TGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPA

Query:  RALANDNHVPTKFFCILSEMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR
        R L NDNHV T+FF IL EMPELTSLDRALLQRHLLSRMDDL+GF+LMPEDEREGF RVLLR
Subjt:  RALANDNHVPTKFFCILSEMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR

KAA0060132.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-5985Show/hide
Query:  RGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPE
        R R T +FAETF DV SNE GGY+ FDM DGNEEFPPVTGSSGSKRKR SQR++DVE IHLAL+QTNEQLRMIAEWPAR LANDNHV T+FF IL EMPE
Subjt:  RGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPE

Query:  LTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR
        LTSLDRALLQRHLLSRMDDL GFVLMPEDEREGFCRVLLR
Subjt:  LTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR

TYK14238.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-5886.57Show/hide
Query:  QFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPELTSLDR
        +FAETF DV SNE  GY+GFDM DGNEEFPP TGSSGSKRKRGSQREVDVEGIH+ALNQTNEQLRMIAEWP RALANDNHV T+FFCIL EMPEL SLDR
Subjt:  QFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPELTSLDR

Query:  ALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR
        ALLQRHLLSRMDDLQGF L+PEDEREGF +VLLR
Subjt:  ALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR

TYK30732.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-5679.72Show/hide
Query:  MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSE
        + DR R  G+FAETFTDV SNE  GY+GFDM DG +EFP +T SSGSKRKR SQRE+DVEGIHLAL+Q+NEQLRMIAEWPA AL NDNHV TKFF IL E
Subjt:  MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSE

Query:  MPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR
        MPELTSLDR LLQRHLLSRMDDL+GFVLMP+DEREGFCRVLL+
Subjt:  MPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR

TrEMBL top hitse value%identityAlignment
A0A5A7U005 Retrotransposon protein1.4e-5981.56Show/hide
Query:  MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSE
        + DR R TG+FAETF DV SNE GGY+GFDM DGNE+FPP+TGSSGSKRKRG+QR+VDVEGIHLAL+QTNEQLRMIAEWP  AL NDNHV T+FF IL E
Subjt:  MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSE

Query:  MPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVL
        MPELTSLD ALLQRHLLS MDDL+GF+LMPEDEREGFCRVL
Subjt:  MPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVL

A0A5A7UVE5 Retrotransposon protein7.7e-5875.93Show/hide
Query:  RTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPV------------------------TGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPA
        R TGQFAETFTDV SNE GGYEGFDMADGNEEFP V                        TGSSGSKRKRGSQREVDVEGIHLAL+QTNEQLRMI EWPA
Subjt:  RTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPV------------------------TGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPA

Query:  RALANDNHVPTKFFCILSEMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR
        R L NDNHV T+FF IL EMPELTSLDRALLQRHLLSRMDDL+GF+LMPEDEREGF RVLLR
Subjt:  RALANDNHVPTKFFCILSEMPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR

A0A5A7UWC3 Retrotransposon protein1.4e-5985Show/hide
Query:  RGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPE
        R R T +FAETF DV SNE GGY+ FDM DGNEEFPPVTGSSGSKRKR SQR++DVE IHLAL+QTNEQLRMIAEWPAR LANDNHV T+FF IL EMPE
Subjt:  RGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPE

Query:  LTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR
        LTSLDRALLQRHLLSRMDDL GFVLMPEDEREGFCRVLLR
Subjt:  LTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR

A0A5D3CSR0 Retrotransposon protein5.3e-5986.57Show/hide
Query:  QFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPELTSLDR
        +FAETF DV SNE  GY+GFDM DGNEEFPP TGSSGSKRKRGSQREVDVEGIH+ALNQTNEQLRMIAEWP RALANDNHV T+FFCIL EMPEL SLDR
Subjt:  QFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPELTSLDR

Query:  ALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR
        ALLQRHLLSRMDDLQGF L+PEDEREGF +VLLR
Subjt:  ALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR

A0A5D3E4A2 Retrotransposon protein8.5e-5779.72Show/hide
Query:  MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSE
        + DR R  G+FAETFTDV SNE  GY+GFDM DG +EFP +T SSGSKRKR SQRE+DVEGIHLAL+Q+NEQLRMIAEWPA AL NDNHV TKFF IL E
Subjt:  MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSE

Query:  MPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR
        MPELTSLDR LLQRHLLSRMDDL+GFVLMP+DEREGFCRVLL+
Subjt:  MPELTSLDRALLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGATCGCGGTAGGACGACGGGTCAGTTCGCTGAGACATTCACTGACGTGAGGTCTAACGAGTCTGGCGGGTATGAAGGATTTGATATGGCGGATGGAAACGAGGA
GTTCCCGCCCGTGACCGGATCGAGTGGATCCAAGAGAAAGAGGGGAAGTCAGCGAGAGGTGGATGTTGAAGGCATACATTTGGCGCTCAACCAAACAAACGAGCAACTCA
GGATGATTGCGGAGTGGCCTGCACGCGCCCTTGCCAATGACAACCATGTACCCACGAAATTCTTCTGCATATTGAGTGAGATGCCAGAACTAACGAGTTTGGATAGGGCG
CTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCAAGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGGACATGA
mRNA sequenceShow/hide mRNA sequence
ACGTCACATAACGTTCGCAATTCACATCCTGCAGCGAAAGGACTCCTGAACAAACCGTTTTCGTATTACGACGAACTTACATATATGTTAGATCGCGGTAGGACGACGGG
TCAGTTCGCTGAGACATTCACTGACGTGAGGTCTAACGAGTCTGGCGGGTATGAAGGATTTGATATGGCGGATGGAAACGAGGAGTTCCCGCCCGTGACCGGATCGAGTG
GATCCAAGAGAAAGAGGGGAAGTCAGCGAGAGGTGGATGTTGAAGGCATACATTTGGCGCTCAACCAAACAAACGAGCAACTCAGGATGATTGCGGAGTGGCCTGCACGC
GCCCTTGCCAATGACAACCATGTACCCACGAAATTCTTCTGCATATTGAGTGAGATGCCAGAACTAACGAGTTTGGATAGGGCGCTATTGCAAAGGCATCTTCTGTCTCG
TATGGACGACCTTCAAGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGGACATGACGAGATAG
Protein sequenceShow/hide protein sequence
MLDRGRTTGQFAETFTDVRSNESGGYEGFDMADGNEEFPPVTGSSGSKRKRGSQREVDVEGIHLALNQTNEQLRMIAEWPARALANDNHVPTKFFCILSEMPELTSLDRA
LLQRHLLSRMDDLQGFVLMPEDEREGFCRVLLRT