CuGenDBv2

Gene ID	MELO3C030238
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Zinc finger BED domain-containing protein RICESLEEPER 3-like
Genome location	chr03:19141597..19142209
RNA-Seq Expression	MELO3C030238
Synteny	MELO3C030238
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR008906 - HAT, C-terminal dimerisation domain IPR012337 - Ribonuclease H-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0042976.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

9.2e-47

94.29

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLGHMARDI AIPVSTVAS+SAFST GRVVDSSRCSLAPK VEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

4.1e-47

96.19

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLGHMARDILAI VSTVASESAFST GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

TYK16593.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

2.4e-47

96.19

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLG MARDILAIPVSTVASESAFST GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

TYK20578.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

2.4e-47

96.19

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLG MARDILAIPVSTVASESAFST GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

TYK23433.1 putative transposase [Cucumis melo var. makuwa]

2.4e-47

96.19

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLG MARDILAIPVSTVASESAFST GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TLU7 Zinc finger BED domain-containing protein RICESLEEPER 3-like

4.4e-47

94.29

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLGHMARDI AIPVSTVAS+SAFST GRVVDSSRCSLAPK VEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like

2.0e-47

96.19

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLGHMARDILAI VSTVASESAFST GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like

1.2e-47

96.19

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLG MARDILAIPVSTVASESAFST GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like

1.2e-47

96.19

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLG MARDILAIPVSTVASESAFST GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

A0A5D3DIL8 Putative transposase

1.2e-47

96.19

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK
        MNSDRFEVLG MARDILAIPVSTVASESAFST GRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQ QHELEEASKFEEGFRVVMENEKEL+DLPDFDK
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDK

Query:  LSITD
        LSITD
Subjt:  LSITD

SwissProt top hits

e value

%identity

Alignment

P03010 Putative AC9 transposase

5.5e-10

61.11

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Query:  FEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWL
        + +L  +ARD+LAI VSTVASESAFS  GRVVD  R  L  + VEALICT++W+
Subjt:  FEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWL

P08770 Putative AC transposase

5.5e-10

61.11

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Query:  FEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWL
        + +L  +ARD+LAI VSTVASESAFS  GRVVD  R  L  + VEALICT++W+
Subjt:  FEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWL

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2

8.7e-08

45.45

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEG---RVVDSSRCSLAPKTVEALICTQNWLNSDP
        +N+ +F  L  MARDILAIP+S V+S ++  + G   R++D  R SL P+ VEAL+C ++WL   P
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEG---RVVDSSRCSLAPKTVEALICTQNWLNSDP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 3

3.0e-08

46.27

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Query:  MNSDRFEVLGHMARDILAIPVSTVASE----SAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDP
        +N+ +F  L  MARD+LAIP+S V+S     SA +T  +++D  R SL P+TVEAL C ++WL   P
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASE----SAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDP

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER

3.0e-08

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Query:  NSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWL
        N  ++  L  MARDIL+IPVS  A +  F  E R +D  + SL P+TVEALIC + WL
Subjt:  NSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWL

Arabidopsis top hits

e value

%identity

Alignment

AT1G18560.1 BED zinc finger ;hAT family dimerisation domain

4.2e-05

29.51

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Query:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNS
        +NS R+  L +MARD LA+  ++ A E  F  +G  +D  +  +   + +++IC ++W+ +
Subjt:  MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNS

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain

2.1e-09

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Query:  NSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWL
        N  ++  L  MARDIL+IPVS  A +  F  E R +D  + SL P+TVEALIC + WL
Subjt:  NSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWL

Sequences

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CDS sequence

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mRNA sequence

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ATGAACAGTGATCGATTTGAGGTTCTTGGTCATATGGCTAGAGATATTTTGGCTATTCCAGTTTCTACTGTAGCATCTGAGTCGGCTTTTAGTACTGAAGGACGTGTTGT
TGACTCATCACGCTGCTCATTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATACATCTTCAAATTCAACATGAATTGGAAG
AGGCTTCAAAATTTGAAGAAGGCTTCCGAGTGGTTATGGAGAATGAAAAAGAGCTTAAAGACCTTCCAGATTTTGATAAGTTATCAATTACCGATTAAGCGATTACTAAC
TAATTCTGATCCAAGACTTGTAATATTTCTATTGACTAGACTATCATAGTGTTTATGTTTCATACTTTGGTTGTATTTGTGACTCTTAATAGTAATGTGGTGAAGTGAAT
TGAACTTGAATGTTTCTAATTTCATTTTGGTAGTATGTTTAGATTCTTATTTTTAGGTTGTTTATTTTATTAATTTGTGTAATACCTATGAACTAAGCA

Protein sequence

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MNSDRFEVLGHMARDILAIPVSTVASESAFSTEGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQIQHELEEASKFEEGFRVVMENEKELKDLPDFDKLSITD

MELO3C030238 (gene) of Melon (DHL92) v4 genome