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MELO3C030252 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030252
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionMyb family transcription factor APL isoform X2
Genome locationchr03:20251671..20255412
RNA-Seq ExpressionMELO3C030252
SyntenyMELO3C030252
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031659.1 myb family transcription factor APL isoform X2 [Cucumis melo var. makuwa]4.8e-61100Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKIK
        MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKIK
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKIK

Query:  AKGDFMAMGGSFEKKRMKNE
        AKGDFMAMGGSFEKKRMKNE
Subjt:  AKGDFMAMGGSFEKKRMKNE

TYK04451.1 myb family transcription factor APL isoform X2 [Cucumis melo var. makuwa]3.5e-4897.98Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKI
        MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGK++
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKI

XP_008438355.1 PREDICTED: myb family transcription factor APL isoform X2 [Cucumis melo]4.5e-2789.19Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MLSGFSQE A MYSAI ALPMDGGGGKFQGSLDGTNL GDACLVLTSDPK RLRWTAELHER VDAVTQL G D
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

XP_038878043.1 protein PHR1-LIKE 2 isoform X1 [Benincasa hispida]4.5e-2789.19Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MLSGFSQE A MYSAI ALPMDGGGGKFQGSLDGTNL GDACLVLTSDPK RLRWTAELHER VDAVTQL G D
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

XP_038878044.1 protein PHR1-LIKE 2 isoform X2 [Benincasa hispida]4.5e-2789.19Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MLSGFSQE A MYSAI ALPMDGGGGKFQGSLDGTNL GDACLVLTSDPK RLRWTAELHER VDAVTQL G D
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

TrEMBL top hitse value%identityAlignment
A0A0A0L435 HTH myb-type domain-containing protein3.7e-2787.84Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MLSGFSQE A MYS I+ALPMDGGGGKFQGSLDGTNL GDACLVLTSDPK RLRWTAELHER VDAVTQL G D
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

A0A1S3AWT2 myb family transcription factor APL isoform X22.2e-2789.19Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MLSGFSQE A MYSAI ALPMDGGGGKFQGSLDGTNL GDACLVLTSDPK RLRWTAELHER VDAVTQL G D
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

A0A1S3AWU1 myb family transcription factor APL isoform X12.2e-2789.19Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MLSGFSQE A MYSAI ALPMDGGGGKFQGSLDGTNL GDACLVLTSDPK RLRWTAELHER VDAVTQL G D
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

A0A5A7SQW3 Myb family transcription factor APL isoform X22.3e-61100Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKIK
        MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKIK
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKIK

Query:  AKGDFMAMGGSFEKKRMKNE
        AKGDFMAMGGSFEKKRMKNE
Subjt:  AKGDFMAMGGSFEKKRMKNE

A0A5D3BXP8 Myb family transcription factor APL isoform X21.7e-4897.98Show/hide
Query:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKI
        MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGK++
Subjt:  MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKI

SwissProt top hitse value%identityAlignment
E5L8F7 Myb family transcription factor IPN22.2e-0877.78Show/hide
Query:  GDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        GD+ LVLT+DPK RLRWT ELHER VDAVTQL G D
Subjt:  GDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

Q8LAJ7 Protein PHR1-LIKE 31.4e-1570.31Show/hide
Query:  MYSAI-SALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MYSAI S+LP+DG  G +    DGTNL  DACLVLT+DPK RLRWT+ELHER VDAVTQL G D
Subjt:  MYSAI-SALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

Q8VYI2 Myb family transcription factor PHL123.5e-0675Show/hide
Query:  LVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        LVLT+DPK RLRWT ELHER VDAVT L G +
Subjt:  LVLTSDPKARLRWTAELHERHVDAVTQLCGKD

Q94A57 Protein PHR1-LIKE 22.5e-2075.38Show/hide
Query:  MYSAISALPMDGG--GGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MYSAI +LP+DGG  GG + G LDGTNL GDACLVLT+DPK RLRWT ELHER VDAVTQL G D
Subjt:  MYSAISALPMDGG--GGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

Q9SAK5 Myb family transcription factor APL8.3e-0875Show/hide
Query:  GDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        GD+ LVLT+DPK RLRWT ELHER VDAV QL G D
Subjt:  GDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

Arabidopsis top hitse value%identityAlignment
AT1G79430.2 Homeodomain-like superfamily protein5.9e-0975Show/hide
Query:  GDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        GD+ LVLT+DPK RLRWT ELHER VDAV QL G D
Subjt:  GDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

AT3G24120.1 Homeodomain-like superfamily protein1.8e-2175.38Show/hide
Query:  MYSAISALPMDGG--GGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MYSAI +LP+DGG  GG + G LDGTNL GDACLVLT+DPK RLRWT ELHER VDAVTQL G D
Subjt:  MYSAISALPMDGG--GGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

AT3G24120.2 Homeodomain-like superfamily protein1.8e-2175.38Show/hide
Query:  MYSAISALPMDGG--GGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MYSAI +LP+DGG  GG + G LDGTNL GDACLVLT+DPK RLRWT ELHER VDAVTQL G D
Subjt:  MYSAISALPMDGG--GGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

AT4G13640.1 Homeodomain-like superfamily protein1.0e-1670.31Show/hide
Query:  MYSAI-SALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MYSAI S+LP+DG  G +    DGTNL  DACLVLT+DPK RLRWT+ELHER VDAVTQL G D
Subjt:  MYSAI-SALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD

AT4G13640.2 Homeodomain-like superfamily protein1.0e-1670.31Show/hide
Query:  MYSAI-SALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD
        MYSAI S+LP+DG  G +    DGTNL  DACLVLT+DPK RLRWT+ELHER VDAVTQL G D
Subjt:  MYSAI-SALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCTGGGTTTTCACAGGAACTGGCCAGAATGTACTCCGCTATTTCGGCACTGCCGATGGACGGCGGTGGGGGTAAGTTTCAAGGTTCTTTAGATGGAACG
AATCTTCTCGGTGATGCTTGTTTGGTTCTCACGTCAGATCCGAAGGCACGCCTCCGTTGGACGGCAGAGCTTCATGAACGACACGTTGACGCTGTCACTCAGCTT
TGTGGCAAAGACACGAATCAAAATTACCATTTTGTGTATATTGCTCTTGAGGTGTTGCTTAAGAAAGAGTATGGTGGAAAGAAAATCAAGGCCAAGGGAGATTTC
ATGGCTATGGGAGGAAGTTTTGAGAAAAAGAGAATGAAAAATGAATGTAAGATTGATTTTTATGAGATAAGGAGTGCAAAGATTGAAAGGAAGAAAAAATTAGAC
CTTGTAAATGTTTTTGGAGAGTTTCTTCCAAAAGTTTTTCCAGAATCCATTGGAGCAGCGAAGCCATATTTGCGGCAATTCATTGATGTATAG
mRNA sequenceShow/hide mRNA sequence
CTCCTTCGGCCTCCTTTGATCTCTTTCTGATCTCTCATCTTCTCCGATCACGCATCTTCTCCTTCCGACTTTCATTCACGAAATTTGGACCTCATCTTCTTTCAT
TCCCCTCTCAAATTTTAGAAACTCATTGTCATCTCTTCCATTCTCTCTGTCGCTCTCTTCTGCTCACCATCTCTCTCTTTCGTTGTCTATCACGCCACGACTGAT
AGACTGTATACTCGTACACCGACAACCGATAGACTAGTACAAAAACCCTTATCTCCCTTCTTCACACAAAAACCCTTAACATTTGGTCCTTTGGTTCTCAATTTT
TTTTCCACACTCGCCGAAGCAAAAATGTTATCTGGGTTTTCACAGGAACTGGCCAGAATGTACTCCGCTATTTCGGCACTGCCGATGGACGGCGGTGGGGGTAAG
TTTCAAGGTTCTTTAGATGGAACGAATCTTCTCGGTGATGCTTGTTTGGTTCTCACGTCAGATCCGAAGGCACGCCTCCGTTGGACGGCAGAGCTTCATGAACGA
CACGTTGACGCTGTCACTCAGCTTTGTGGCAAAGACACGAATCAAAATTACCATTTTGTGTATATTGCTCTTGAGGTGTTGCTTAAGAAAGAGTATGGTGGAAAG
AAAATCAAGGCCAAGGGAGATTTCATGGCTATGGGAGGAAGTTTTGAGAAAAAGAGAATGAAAAATGAATGTAAGATTGATTTTTATGAGATAAGGAGTGCAAAG
ATTGAAAGGAAGAAAAAATTAGACCTTGTAAATGTTTTTGGAGAGTTTCTTCCAAAAGTTTTTCCAGAATCCATTGGAGCAGCGAAGCCATATTTGCGGCAATTC
ATTGATGTATAG
Protein sequenceShow/hide protein sequence
MLSGFSQELARMYSAISALPMDGGGGKFQGSLDGTNLLGDACLVLTSDPKARLRWTAELHERHVDAVTQLCGKDTNQNYHFVYIALEVLLKKEYGGKKIKAKGDF
MAMGGSFEKKRMKNECKIDFYEIRSAKIERKKKLDLVNVFGEFLPKVFPESIGAAKPYLRQFIDV