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MELO3C030253 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030253
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionZnF_PMZ domain-containing protein
Genome locationchr03:20247265..20248503
RNA-Seq ExpressionMELO3C030253
SyntenyMELO3C030253
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK14069.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]4.7e-3161.02Show/hide
Query:  IEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYRVDQHEFEVHH
        IE G+N VY      +      + L+KNHK LP++DSF+K  R YT L FEYYMRQL+ LSPS+RHELEAVGRHRWAR         IY VDQHEFEVHH
Subjt:  IEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYRVDQHEFEVHH

Query:  RKEQYVVNILDCTCSCHQ
        RKEQ+ VNIL+ TCSC Q
Subjt:  RKEQYVVNILDCTCSCHQ

TYK23191.1 uncharacterized protein E5676_scaffold142G002210 [Cucumis melo var. makuwa]2.8e-3661.72Show/hide
Query:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYR
        M+IVSDAHK IE G+N  YE     +      +  +KNHK LP++DSF+K AR YT L FEYYMRQL+ LSPS+RHELEAVGRH+WAR         IY 
Subjt:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYR

Query:  VDQHEFEVHHRKEQYVVNILDCTCSCHQ
        VDQHEFEVHHRKEQ+V+NIL+ TCSC Q
Subjt:  VDQHEFEVHHRKEQYVVNILDCTCSCHQ

XP_008456231.1 PREDICTED: uncharacterized protein LOC103496235 [Cucumis melo]4.7e-3150.97Show/hide
Query:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRH------------RWA-
        M+IVSDAHK IE G+NVVYE     +      + L+KNHK LP++DSF+K AR Y+ L FEYYMRQL+ LSPS+RHEL+AVGRH            +W+ 
Subjt:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRH------------RWA-

Query:  -----------------------RIYRVDQHEFEVHHRKEQYVVNILDCTCSCHQ
                                IY VDQHEFEVHHRKEQ+VVNIL+ TCSC Q
Subjt:  -----------------------RIYRVDQHEFEVHHRKEQYVVNILDCTCSCHQ

XP_008457137.1 PREDICTED: uncharacterized protein LOC103496884 [Cucumis melo]8.3e-3662.5Show/hide
Query:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYR
        M+IVSDAHK IE G+N VY      +      + L+KNHK LP++DSF+K  R YT L FEYYMRQL+ LSPS+RHELEAVGRHRWAR         IY 
Subjt:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYR

Query:  VDQHEFEVHHRKEQYVVNILDCTCSCHQ
        VDQHEFEVHHRKEQ+ VNIL+ TCSC Q
Subjt:  VDQHEFEVHHRKEQYVVNILDCTCSCHQ

XP_016901629.1 PREDICTED: uncharacterized protein LOC107991322 [Cucumis melo]2.3e-3051.01Show/hide
Query:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR------------
        M+IV DA K IE G+NVVYE     +      + L+KNHK LPI+DSF+K AR YT + FEYY+RQL+ LS S+RHELEAVGRH+WAR            
Subjt:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR------------

Query:  ------------------IYRVDQHEFEVHHRKEQYVVNILDCTCSCHQ
                          IY  DQHEFEVHH KEQ+VVNIL+  CSC Q
Subjt:  ------------------IYRVDQHEFEVHHRKEQYVVNILDCTCSCHQ

TrEMBL top hitse value%identityAlignment
A0A1S3C2R0 uncharacterized protein LOC1034962352.3e-3150.97Show/hide
Query:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRH------------RWA-
        M+IVSDAHK IE G+NVVYE     +      + L+KNHK LP++DSF+K AR Y+ L FEYYMRQL+ LSPS+RHEL+AVGRH            +W+ 
Subjt:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRH------------RWA-

Query:  -----------------------RIYRVDQHEFEVHHRKEQYVVNILDCTCSCHQ
                                IY VDQHEFEVHHRKEQ+VVNIL+ TCSC Q
Subjt:  -----------------------RIYRVDQHEFEVHHRKEQYVVNILDCTCSCHQ

A0A1S3C5H6 uncharacterized protein LOC1034968844.0e-3662.5Show/hide
Query:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYR
        M+IVSDAHK IE G+N VY      +      + L+KNHK LP++DSF+K  R YT L FEYYMRQL+ LSPS+RHELEAVGRHRWAR         IY 
Subjt:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYR

Query:  VDQHEFEVHHRKEQYVVNILDCTCSCHQ
        VDQHEFEVHHRKEQ+ VNIL+ TCSC Q
Subjt:  VDQHEFEVHHRKEQYVVNILDCTCSCHQ

A0A1S4E090 uncharacterized protein LOC1079913221.1e-3051.01Show/hide
Query:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR------------
        M+IV DA K IE G+NVVYE     +      + L+KNHK LPI+DSF+K AR YT + FEYY+RQL+ LS S+RHELEAVGRH+WAR            
Subjt:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR------------

Query:  ------------------IYRVDQHEFEVHHRKEQYVVNILDCTCSCHQ
                          IY  DQHEFEVHH KEQ+VVNIL+  CSC Q
Subjt:  ------------------IYRVDQHEFEVHHRKEQYVVNILDCTCSCHQ

A0A5D3CUZ6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.3e-3161.02Show/hide
Query:  IEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYRVDQHEFEVHH
        IE G+N VY      +      + L+KNHK LP++DSF+K  R YT L FEYYMRQL+ LSPS+RHELEAVGRHRWAR         IY VDQHEFEVHH
Subjt:  IEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYRVDQHEFEVHH

Query:  RKEQYVVNILDCTCSCHQ
        RKEQ+ VNIL+ TCSC Q
Subjt:  RKEQYVVNILDCTCSCHQ

A0A5D3DHP7 Uncharacterized protein1.4e-3661.72Show/hide
Query:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYR
        M+IVSDAHK IE G+N  YE     +      +  +KNHK LP++DSF+K AR YT L FEYYMRQL+ LSPS+RHELEAVGRH+WAR         IY 
Subjt:  MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWAR---------IYR

Query:  VDQHEFEVHHRKEQYVVNILDCTCSCHQ
        VDQHEFEVHHRKEQ+V+NIL+ TCSC Q
Subjt:  VDQHEFEVHHRKEQYVVNILDCTCSCHQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTGTGTCTGATGCTCACAAAATTATAGAAAAAGGGTATAATGTCGTTTACGAAACACCGAACATGTGGATTATGTGCATTCCATTTTCACAAGAACTTGAAAA
GAACCATAAATTGCTTCCCATCAAGGACTCCTTCCATAAATATGCCAGAGTTTATACCTCATTGACGTTTGAATACTACATGAGACAACTCGATCATCTCTCTCCATCAA
TTAGGCATGAGTTGGAAGCTGTTGGAAGACATAGGTGGGCTAGGATATATCGTGTAGACCAACATGAATTTGAAGTCCACCATCGTAAGGAACAATATGTTGTCAACATT
TTAGACTGCACGTGCTCATGTCATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACTAGTTGCTTCAATTGATGCATGGAATTATTGTGTACCAATTATTTCAGTTGAGGGTGCAACCATGAAGAACAAATACCTTGGTATGCTCATTTATGCTTGCAC
TATTGATGACAATTCTCAAATTATGCCACTAGCTTTTGCTGTTCTTGATTCAGAGAACAAACTTGTCATAGGCATGGTTTTTTTTTTAATCTTAAAGTTGTTTCTAGAGA
ACAAAATGAAATGATAATTGTGTCTGATGCTCACAAAATTATAGAAAAAGGGTATAATGTCGTTTACGAAACACCGAACATGTGGATTATGTGCATTCCATTTTCACAAG
AACTTGAAAAGAACCATAAATTGCTTCCCATCAAGGACTCCTTCCATAAATATGCCAGAGTTTATACCTCATTGACGTTTGAATACTACATGAGACAACTCGATCATCTC
TCTCCATCAATTAGGCATGAGTTGGAAGCTGTTGGAAGACATAGGTGGGCTAGGATATATCGTGTAGACCAACATGAATTTGAAGTCCACCATCGTAAGGAACAATATGT
TGTCAACATTTTAGACTGCACGTGCTCATGTCATCAATAGGACCTTGATCTAATCCCTTGTTCACATACATGTATTGCATTGTCTACAAAGAATCTTAATCTGCATATGT
ATACTGATAACTTCTACTATGTTTCAAATTTGATAAACTTGTACAAGAAGGGAACACGTCAATTGGTAGTGTAGACCAAATTAGGAATACAAACCAAGGTGGCAATGATG
GAATACTTCCACCATAGGTTAAACGTTTAGCTAGAAGGCCTAAAAAAAAGATGTTTACTTCATTTTTAGAGGAAAAAAAGTGACTGTTTGTTGCAGCAGGTGTGGTCAAA
GAGGTCACAATTGTAGGTCTTGTAAAGAACCTATTCA
Protein sequenceShow/hide protein sequence
MIIVSDAHKIIEKGYNVVYETPNMWIMCIPFSQELEKNHKLLPIKDSFHKYARVYTSLTFEYYMRQLDHLSPSIRHELEAVGRHRWARIYRVDQHEFEVHHRKEQYVVNI
LDCTCSCHQ