; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C030277 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030277
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr03:22049733..22054097
RNA-Seq ExpressionMELO3C030277
SyntenyMELO3C030277
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032479.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.0e-0737.82Show/hide
Query:  LLEPQTVSLAFSKAVERGKSHHQRKFKR---------EFRRKKKRNFTRILRLKKRRRTQAKGCVRMILEVVLFRGLSEFIHMESDLHVFRPHYDKDDRS
        L  PQT +++ +        HH R +             + K ++N T ++    R RT  K     +L       LS   + ++ ++V RPHYDKDD S
Subjt:  LLEPQTVSLAFSKAVERGKSHHQRKFKR---------EFRRKKKRNFTRILRLKKRRRTQAKGCVRMILEVVLFRGLSEFIHMESDLHVFRPHYDKDDRS

Query:  AGRTPLHRRA---CKRCCIGCTLHNSRQIQIKKSVVRRLHAIFRSKLAGSPGGGVT
         GR PLHR +   C+      TLH SRQI IK+S V RLHA+FRSKL GS G  VT
Subjt:  AGRTPLHRRA---CKRCCIGCTLHNSRQIQIKKSVVRRLHAIFRSKLAGSPGGGVT

KAA0032947.1 reverse transcriptase [Cucumis melo var. makuwa]1.7e-0590.62Show/hide
Query:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTL
        SRQIQI+KSVVRRLHAIFRSK+AGSPGGGVT+
Subjt:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTL

KAA0045512.1 reverse transcriptase [Cucumis melo var. makuwa]5.9e-0666.67Show/hide
Query:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRKDSYLTFL
        SRQIQ++KSVVRRLHAIFRS +AGSPGGGVTL +   +S KD    F+
Subjt:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRKDSYLTFL

KAA0056192.1 hypothetical protein E6C27_scaffold431G00190 [Cucumis melo var. makuwa]4.5e-0671.43Show/hide
Query:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRK-DSYLTFL
        SRQIQ++K+VVRR HAIFRSK+AGSPGGGVTL      SRK  SYL+FL
Subjt:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRK-DSYLTFL

KAA0056677.1 hypothetical protein E6C27_scaffold73G00010 [Cucumis melo var. makuwa]7.0e-0775.51Show/hide
Query:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRK-DSYLTFL
        SRQIQ++KSVVRRLHAIFRSK+AGSPGGGVTL      SRK  SYL+FL
Subjt:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRK-DSYLTFL

TrEMBL top hitse value%identityAlignment
A0A5A7STG0 DNA/RNA polymerases superfamily protein3.4e-0737.82Show/hide
Query:  LLEPQTVSLAFSKAVERGKSHHQRKFKR---------EFRRKKKRNFTRILRLKKRRRTQAKGCVRMILEVVLFRGLSEFIHMESDLHVFRPHYDKDDRS
        L  PQT +++ +        HH R +             + K ++N T ++    R RT  K     +L       LS   + ++ ++V RPHYDKDD S
Subjt:  LLEPQTVSLAFSKAVERGKSHHQRKFKR---------EFRRKKKRNFTRILRLKKRRRTQAKGCVRMILEVVLFRGLSEFIHMESDLHVFRPHYDKDDRS

Query:  AGRTPLHRRA---CKRCCIGCTLHNSRQIQIKKSVVRRLHAIFRSKLAGSPGGGVT
         GR PLHR +   C+      TLH SRQI IK+S V RLHA+FRSKL GS G  VT
Subjt:  AGRTPLHRRA---CKRCCIGCTLHNSRQIQIKKSVVRRLHAIFRSKLAGSPGGGVT

A0A5A7SUD6 Reverse transcriptase8.3e-0690.62Show/hide
Query:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTL
        SRQIQI+KSVVRRLHAIFRSK+AGSPGGGVT+
Subjt:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTL

A0A5A7TQ76 Reverse transcriptase2.9e-0666.67Show/hide
Query:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRKDSYLTFL
        SRQIQ++KSVVRRLHAIFRS +AGSPGGGVTL +   +S KD    F+
Subjt:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRKDSYLTFL

A0A5A7UJY2 Uncharacterized protein2.2e-0671.43Show/hide
Query:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRK-DSYLTFL
        SRQIQ++K+VVRR HAIFRSK+AGSPGGGVTL      SRK  SYL+FL
Subjt:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRK-DSYLTFL

A0A5A7UPX3 Uncharacterized protein3.4e-0775.51Show/hide
Query:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRK-DSYLTFL
        SRQIQ++KSVVRRLHAIFRSK+AGSPGGGVTL      SRK  SYL+FL
Subjt:  SRQIQIKKSVVRRLHAIFRSKLAGSPGGGVTLGVSILLSRK-DSYLTFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGACTAGGGGAGAAATGGGGAATCAGGCCCAAACATTCCTTTGGATCGGCAGTAGACTAGCTCTTATCTACCGTATTAGTTTAAATCTTGGACTCCTTTTA
GTCGAGCCTCCAGACGGCTTGATCTTGATTTCTTTGTTTATGTCTAGACAAGTAAAGAAAGATCAAAATCGAATTCAAGTCAATGAACAAGGCTCCGTTAGGCTT
CTCGAGCCACAGACAGTTTCCCTTGCCTTTTCAAAGGCAGTAGAGAGAGGGAAGTCACACCATCAAAGAAAATTTAAGAGAGAGTTTAGAAGGAAGAAGAAGAGG
AATTTTACTAGAATTTTGAGGTTGAAGAAGAGAAGGAGAACTCAAGCAAAAGGTTGTGTGCGCATGATTCTTGAAGTTGTTCTGTTTCGAGGGTTATCTGAGTTT
ATTCACATGGAATCAGATTTACATGTCTTCAGGCCCCACTACGACAAAGACGATAGAAGTGCTGGGCGGACCCCACTACATCGTAGAGCTTGTAAACGTTGTTGT
ATTGGGTGTACCCTACACAACAGTCGACAGATACAGATAAAGAAAAGCGTTGTCCGTCGGCTTCACGCCATCTTTCGGTCTAAGCTAGCAGGTAGTCCGGGAGGG
GGTGTGACATTAGGTGTGTCAATACTTCTTAGTCGAAAGGATTCTTATTTGACCTTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
TCTCAAACCGCTACATTTTCTTTATACTCAATGCAAGGGCGAGCGTGAACCTTTAGCTTCCATTGACGCTTTTCTCTTATTCGCTAATTTTAGCTCTCTGATTTT
GAGTTCCATTGGTGCCTCTGTGTAGTGGGCTTTTCTTATGTCTCCTTCGTCATCCAATGCCTTATGGTGGGGACGACCTCTTTATTGGCTTCTGCCTTTTTCTAC
CACGAAGTGGGAGTTTATCCTAGAATACACAATATTCTAAATAAGAGCAAGAAAAGTGAACACGGGAACGAGACCAACTTCAGCTTCCCCAACGACTTCCTCATT
CCACAGGCGGATGGCGGATGCCATTAGGATAGGTTATTTATTGCTCAAGTAGAAAGAAGAAAGAAAGAATAGTAGAGGTTTCGAGGCTGGGAATAGGTTGTAGAA
CCCCTTGAATCTATAGCATGAGATGCTGACTAGGGGAGAAATGGGGAATCAGGCCCAAACATTCCTTTGGATCGGCAGTAGACTAGCTCTTATCTACCGTATTAG
TTTAAATCTTGGACTCCTTTTAGTCGAGCCTCCAGACGGCTTGATCTTGATTTCTTTGTTTATGTCTAGACAAGTAAAGAAAGATCAAAATCGAATTCAAGTCAA
TGAACAAGGCTCCGTTAGGCTTCTCGAGCCACAGACAGTTTCCCTTGCCTTTTCAAAGGCAGTAGAGAGAGGGAAGTCACACCATCAAAGAAAATTTAAGAGAGA
GTTTAGAAGGAAGAAGAAGAGGAATTTTACTAGAATTTTGAGGTTGAAGAAGAGAAGGAGAACTCAAGCAAAAGGTTGTGTGCGCATGATTCTTGAAGTTGTTCT
GTTTCGAGGGTTATCTGAGTTTATTCACATGGAATCAGATTTACATGTCTTCAGGCCCCACTACGACAAAGACGATAGAAGTGCTGGGCGGACCCCACTACATCG
TAGAGCTTGTAAACGTTGTTGTATTGGGTGTACCCTACACAACAGTCGACAGATACAGATAAAGAAAAGCGTTGTCCGTCGGCTTCACGCCATCTTTCGGTCTAA
GCTAGCAGGTAGTCCGGGAGGGGGTGTGACATTAGGTGTGTCAATACTTCTTAGTCGAAAGGATTCTTATTTGACCTTTCTTTAA
Protein sequenceShow/hide protein sequence
MLTRGEMGNQAQTFLWIGSRLALIYRISLNLGLLLVEPPDGLILISLFMSRQVKKDQNRIQVNEQGSVRLLEPQTVSLAFSKAVERGKSHHQRKFKREFRRKKKR
NFTRILRLKKRRRTQAKGCVRMILEVVLFRGLSEFIHMESDLHVFRPHYDKDDRSAGRTPLHRRACKRCCIGCTLHNSRQIQIKKSVVRRLHAIFRSKLAGSPGG
GVTLGVSILLSRKDSYLTFL