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MELO3C030346 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030346
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionSmr domain-containing protein
Genome locationchr08:33435084..33440391
RNA-Seq ExpressionMELO3C030346
SyntenyMELO3C030346
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464040.1 PREDICTED: SMR domain-containing protein At5g58720 isoform X1 [Cucumis melo]9.4e-0645.1Show/hide
Query:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS
        LGDECELSMAV+             +LN    L G   K+        N                 SIDRASDSTSYS ESE PESIWSFAAVC  D++ 
Subjt:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS

Query:  LA
        LA
Subjt:  LA

XP_016903144.1 PREDICTED: SMR domain-containing protein At5g58720 isoform X2 [Cucumis melo]9.4e-0645.1Show/hide
Query:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS
        LGDECELSMAV+             +LN    L G   K+        N                 SIDRASDSTSYS ESE PESIWSFAAVC  D++ 
Subjt:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS

Query:  LA
        LA
Subjt:  LA

XP_016903145.1 PREDICTED: SMR domain-containing protein At5g58720 isoform X3 [Cucumis melo]9.4e-0645.1Show/hide
Query:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS
        LGDECELSMAV+             +LN    L G   K+        N                 SIDRASDSTSYS ESE PESIWSFAAVC  D++ 
Subjt:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS

Query:  LA
        LA
Subjt:  LA

XP_016903147.1 PREDICTED: SMR domain-containing protein At5g58720 isoform X5 [Cucumis melo]9.4e-0645.1Show/hide
Query:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS
        LGDECELSMAV+             +LN    L G   K+        N                 SIDRASDSTSYS ESE PESIWSFAAVC  D++ 
Subjt:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS

Query:  LA
        LA
Subjt:  LA

XP_031742718.1 SMR domain-containing protein At5g58720 isoform X3 [Cucumis sativus]9.4e-0639.82Show/hide
Query:  LGDECELSMAVL------------------------GKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGLSIDRASDSTSYSFESELPESIWS
        LGDECELSMAV+                          ++   DR   +  N+   LE    +        +   G  IDRASDSTSYS ESE PESIWS
Subjt:  LGDECELSMAVL------------------------GKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGLSIDRASDSTSYSFESELPESIWS

Query:  FAAVC-IDIQSLA
        FAAVC  D++ LA
Subjt:  FAAVC-IDIQSLA

TrEMBL top hitse value%identityAlignment
A0A0A0KFA5 Smr domain-containing protein4.5e-0639.82Show/hide
Query:  LGDECELSMAVL------------------------GKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGLSIDRASDSTSYSFESELPESIWS
        LGDECELSMAV+                          ++   DR   +  N+   LE    +        +   G  IDRASDSTSYS ESE PESIWS
Subjt:  LGDECELSMAVL------------------------GKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGLSIDRASDSTSYSFESELPESIWS

Query:  FAAVC-IDIQSLA
        FAAVC  D++ LA
Subjt:  FAAVC-IDIQSLA

A0A1S4E4I2 SMR domain-containing protein At5g58720 isoform X14.5e-0645.1Show/hide
Query:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS
        LGDECELSMAV+             +LN    L G   K+        N                 SIDRASDSTSYS ESE PESIWSFAAVC  D++ 
Subjt:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS

Query:  LA
        LA
Subjt:  LA

A0A1S4E4J9 SMR domain-containing protein At5g58720 isoform X54.5e-0645.1Show/hide
Query:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS
        LGDECELSMAV+             +LN    L G   K+        N                 SIDRASDSTSYS ESE PESIWSFAAVC  D++ 
Subjt:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS

Query:  LA
        LA
Subjt:  LA

A0A1S4E596 SMR domain-containing protein At5g58720 isoform X34.5e-0645.1Show/hide
Query:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS
        LGDECELSMAV+             +LN    L G   K+        N                 SIDRASDSTSYS ESE PESIWSFAAVC  D++ 
Subjt:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS

Query:  LA
        LA
Subjt:  LA

A0A5D3CV78 SMR domain-containing protein4.5e-0645.1Show/hide
Query:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS
        LGDECELSMAV+             +LN    L G   K+        N                 SIDRASDSTSYS ESE PESIWSFAAVC  D++ 
Subjt:  LGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGL-------------SIDRASDSTSYSFESELPESIWSFAAVC-IDIQS

Query:  LA
        LA
Subjt:  LA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAACAAAACGGCTGTTGCTTCTACGATAACAATATCTACGGAGGCAGAGCAATTCCTTTGCTACAGTTAGGGGATGAGTGTGAACTGAGCATGGCCGTCTT
AGGAAAAAGAGAGAGTTACAAAGATAGGCCAGAAGGAGATAGCTTAAACTACAATTGCCTGCTAGAAGGTTTACAATGCAAGGAAGCTTATTGTCCAACACGGCCCATTA
ATACTAATGGCCTTTCGATAGATCGTGCTTCAGATTCTACCTCCTACTCGTTCGAAAGTGAGCTTCCGGAGAGTATATGGTCCTTTGCGGCTGTATGTATTGACATACAG
TCCTTGGCAGTGGAGGCAAAATTATTGCAAGTCAATGTGGCCGTGATGTGGAAAAGCTTAGAAAACCATGTCTGCCTAACCCTTGAGCTTGAAGCTTGGGGAACTCTTCA
CGTTTGGCCTAATCAAAACCAGACTAGCCTAGTTCTTAGAGTTAAAACG
mRNA sequenceShow/hide mRNA sequence
ATGAATTGTGCGTCGGGGAAAACCTCTTATTCCCGACGTCTTACTTTATGCGTCGAGAATAGCTTTTTCTCCCGACATCTTACTTTATGCGTCGGGAGGAACCTCTTATT
CCTGACGTCTTTTATGCCGACGTCTTTTTTGACGTCGGGAAAAGTCCGATTTCTTGTAGTGTTCGTCTAGTTAGATCCAATCAGGCCATGAAGCAAATATTTCTATAAGA
AGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGATCATCCCATCGCCGGCGTTGGGATCCACCCCTGCTGGTGCAGTGACGGAGGCGTTATCCGTGGCTTCTCTTAACGAT
CCGTTGTTACCTGTTTCTAGAGAAGTTAGGGCGACGACTTCTTCTTCGTCTTTAAGTGCGATCACGGCTTCGAGTTCGAGTTCGTATTTCTCTGATGATGTTTTAGATTA
TAAAGGTTATATGGGGAAGAAACAAAACGGCTGTTGCTTCTACGATAACAATATCTACGGAGGCAGAGCAATTCCTTTGCTACAGTTAGGGGATGAGTGTGAACTGAGCA
TGGCCGTCTTAGGAAAAAGAGAGAGTTACAAAGATAGGCCAGAAGGAGATAGCTTAAACTACAATTGCCTGCTAGAAGGTTTACAATGCAAGGAAGCTTATTGTCCAACA
CGGCCCATTAATACTAATGGCCTTTCGATAGATCGTGCTTCAGATTCTACCTCCTACTCGTTCGAAAGTGAGCTTCCGGAGAGTATATGGTCCTTTGCGGCTGTATGTAT
TGACATACAGTCCTTGGCAGTGGAGGCAAAATTATTGCAAGTCAATGTGGCCGTGATGTGGAAAAGCTTAGAAAACCATGTCTGCCTAACCCTTGAGCTTGAAGCTTGGG
GAACTCTTCACGTTTGGCCTAATCAAAACCAGACTAGCCTAGTTCTTAGAGTTAAAACG
Protein sequenceShow/hide protein sequence
MGKKQNGCCFYDNNIYGGRAIPLLQLGDECELSMAVLGKRESYKDRPEGDSLNYNCLLEGLQCKEAYCPTRPINTNGLSIDRASDSTSYSFESELPESIWSFAAVCIDIQ
SLAVEAKLLQVNVAVMWKSLENHVCLTLELEAWGTLHVWPNQNQTSLVLRVKT