CuGenDBv2

Gene ID	MELO3C030457
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Pseudouridine-5'-phosphate glycosidase
Genome location	chr04:9535964..9536245
RNA-Seq Expression	MELO3C030457
Synteny	MELO3C030457
Gene Ontology terms	GO:0001522 - pseudouridine synthesis (biological process) GO:0005777 - peroxisome (cellular component) GO:0004730 - pseudouridylate synthase activity (molecular function) GO:0030597 - RNA glycosylase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR007342 - Pseudouridine-5'-phosphate glycosidase IPR022830 - Indigoidine synthase A-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAB4278317.1 unnamed protein product [Prunus armeniaca]

5.0e-16

87.5

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILD+ RTLEYLETQGVCVA YR TN+F +FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

CAB4308804.1 unnamed protein product [Prunus armeniaca]

5.0e-16

87.5

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILD+ RTLEYLETQGVCVA YR TN+F +FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

ONI14017.1 hypothetical protein PRUPE_4G258300 [Prunus persica]

6.5e-16

87.5

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILD+ RTLEYLETQGVCVA YR TN+F  FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

XP_008227236.1 PREDICTED: pseudouridine-5'-phosphate glycosidase isoform X1 [Prunus mume]

5.0e-16

87.5

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILD+ RTLEYLETQGVCVA YR TN+F +FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

XP_021819796.1 uncharacterized protein LOC110761605 [Prunus avium]

5.0e-16

89.29

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILDI RTLEYLETQGVCVA YR TN+F  FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

TrEMBL top hits

e value

%identity

Alignment

A0A251PR17 Uncharacterized protein

3.1e-16

87.5

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILD+ RTLEYLETQGVCVA YR TN+F  FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

A0A5E4FER5 PREDICTED: pseudouridine-5'-phosphate glycosidase

3.1e-16

87.5

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILD+ RTLEYLETQGVCVA YR TN+F  FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

A0A6J5URB8 Uncharacterized protein

2.4e-16

87.5

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILD+ RTLEYLETQGVCVA YR TN+F +FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

A0A6J5XCF6 Uncharacterized protein

2.4e-16

87.5

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILD+ RTLEYLETQGVCVA YR TN+F +FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

A0A6P5T0R7 uncharacterized protein LOC110761605

2.4e-16

89.29

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        MDISSDLTELGRTPVAVISAGVKSILDI RTLEYLETQGVCVA YR TN+F  FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

SwissProt top hits

e value

%identity

Alignment

B8II14 Pseudouridine-5'-phosphate glycosidase

1.3e-11

64.29

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        +DIS+DL EL RTPVAV+ AG K+ILD+ RTLEYLET+GV V  YR T++F  F+S
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

B9LGZ1 Pseudouridine-5'-phosphate glycosidase

1.1e-10

61.82

Show/hide

Query:  DISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        D+S+DLTELGRTPV V+ AG K+ILD+  TLEYLETQGV V  Y+ T +F  F++
Subjt:  DISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

C0ZIY1 Pseudouridine-5'-phosphate glycosidase

3.5e-12

66.67

Show/hide

Query:  DISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFSWK
        D+S+DLTEL +T VAV+ AG KSILDI RTLEYLETQGV V  YR T++F +FF+ K
Subjt:  DISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFSWK

Q1M4T3 Pseudouridine-5'-phosphate glycosidase 2

8.5e-11

67.27

Show/hide

Query:  DISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS
        DIS+DLTELGRT  AV+ AGVKSILDI +TLEYLETQ V V  Y  T  F  FF+
Subjt:  DISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFS

Q9USY1 Pseudouridine-metabolizing bifunctional protein C1861.05

1.5e-10

68.42

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPY-RMTNKFSTFFS
        MDIS+DL ELGRT VAV+SAGVKSILDI RTLE LETQGV V       + F  FFS
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPY-RMTNKFSTFFS

Arabidopsis top hits

e value

%identity

Alignment

AT1G50510.1 indigoidine synthase A family protein

3.4e-15

72.41

Show/hide

Query:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFSWK
        MDISSDLT LGRTP+AVISAGVKSILDI +TLEYLETQ V VA Y+ +++F  FF+ K
Subjt:  MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFSWK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATATATCTTCTGATCTCACCGAGCTAGGAAGAACCCCTGTAGCTGTCATCTCAGCTGGTGTAAAATCGATATTAGACATCTTCAGGACCCTTGAATATTTG
GAAACTCAAGGAGTATGTGTTGCACCTTATAGAATGACAAACAAATTTTCTACTTTTTTTTCATGGAAACCAGTGGCTGCA

mRNA sequence

Show/hide mRNA sequence

ATGGATATATCTTCTGATCTCACCGAGCTAGGAAGAACCCCTGTAGCTGTCATCTCAGCTGGTGTAAAATCGATATTAGACATCTTCAGGACCCTTGAATATTTG
GAAACTCAAGGAGTATGTGTTGCACCTTATAGAATGACAAACAAATTTTCTACTTTTTTTTCATGGAAACCAGTGGCTGCAAG

Protein sequence

Show/hide protein sequence

MDISSDLTELGRTPVAVISAGVKSILDIFRTLEYLETQGVCVAPYRMTNKFSTFFSWKPVAA

MELO3C030457 (gene) of Melon (DHL92) v4 genome