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MELO3C030471 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030471
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionglial fibrillary acidic protein-like
Genome locationchr05:7286594..7287299
RNA-Seq ExpressionMELO3C030471
SyntenyMELO3C030471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.9e-56100Show/hide
Query:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
        MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
Subjt:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA

Query:  KKTAIEIEVLQHSIKEYKSQLIEAK
        KKTAIEIEVLQHSIKEYKSQLIEAK
Subjt:  KKTAIEIEVLQHSIKEYKSQLIEAK

KAA0049672.1 uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa]3.1e-5890.71Show/hide
Query:  MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAIEIEVLQHSIKEYKSQLIEAKS
        MNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIA+LHEE+EAKKTAIEIEVLQHSIKEYKSQ IEAKS
Subjt:  MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAIEIEVLQHSIKEYKSQLIEAKS

Query:  KNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV
        KNRFLQKVVN+SESQLLIC KAR+VVTDDYAQLIE  + +
Subjt:  KNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV

TYK12200.1 uncharacterized protein E5676_scaffold106G001510 [Cucumis melo var. makuwa]3.1e-5890.71Show/hide
Query:  MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAIEIEVLQHSIKEYKSQLIEAKS
        MNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIA+LHEE+EAKKTAIEIEVLQHSIKEYKSQ IEAKS
Subjt:  MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAIEIEVLQHSIKEYKSQLIEAKS

Query:  KNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV
        KNRFLQKVVN+SESQLLIC KAR+VVTDDYAQLIE  + +
Subjt:  KNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.9e-56100Show/hide
Query:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
        MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
Subjt:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA

Query:  KKTAIEIEVLQHSIKEYKSQLIEAK
        KKTAIEIEVLQHSIKEYKSQLIEAK
Subjt:  KKTAIEIEVLQHSIKEYKSQLIEAK

XP_008464352.1 PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]2.4e-6680.66Show/hide
Query:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
        MSESLVPNIELKKYHD+EKELKRLREMNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
Subjt:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA

Query:  KK---------------TAIEIEVLQHSIKEYKSQLIEAKSKNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV
        +K               TA+ IEVLQHSI+EYKSQLIEA+SKN FLQK VN+SESQLLIC KAR+V+TDDYAQL+E  + +
Subjt:  KK---------------TAIEIEVLQHSIKEYKSQLIEAKSKNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV

TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like1.1e-6680.66Show/hide
Query:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
        MSESLVPNIELKKYHD+EKELKRLREMNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
Subjt:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA

Query:  KK---------------TAIEIEVLQHSIKEYKSQLIEAKSKNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV
        +K               TA+ IEVLQHSI+EYKSQLIEA+SKN FLQK VN+SESQLLIC KAR+V+TDDYAQL+E  + +
Subjt:  KK---------------TAIEIEVLQHSIKEYKSQLIEAKSKNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV

A0A5A7SNY0 Glial fibrillary acidic protein-like1.4e-56100Show/hide
Query:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
        MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
Subjt:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA

Query:  KKTAIEIEVLQHSIKEYKSQLIEAK
        KKTAIEIEVLQHSIKEYKSQLIEAK
Subjt:  KKTAIEIEVLQHSIKEYKSQLIEAK

A0A5A7U1L8 Retrotrans_gag domain-containing protein1.5e-5890.71Show/hide
Query:  MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAIEIEVLQHSIKEYKSQLIEAKS
        MNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIA+LHEE+EAKKTAIEIEVLQHSIKEYKSQ IEAKS
Subjt:  MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAIEIEVLQHSIKEYKSQLIEAKS

Query:  KNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV
        KNRFLQKVVN+SESQLLIC KAR+VVTDDYAQLIE  + +
Subjt:  KNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV

A0A5D3CLA9 Retrotrans_gag domain-containing protein1.5e-5890.71Show/hide
Query:  MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAIEIEVLQHSIKEYKSQLIEAKS
        MNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIA+LHEE+EAKKTAIEIEVLQHSIKEYKSQ IEAKS
Subjt:  MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAIEIEVLQHSIKEYKSQLIEAKS

Query:  KNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV
        KNRFLQKVVN+SESQLLIC KAR+VVTDDYAQLIE  + +
Subjt:  KNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNV

A0A5D3D0S2 Glial fibrillary acidic protein-like1.4e-56100Show/hide
Query:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
        MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA
Subjt:  MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA

Query:  KKTAIEIEVLQHSIKEYKSQLIEAK
        KKTAIEIEVLQHSIKEYKSQLIEAK
Subjt:  KKTAIEIEVLQHSIKEYKSQLIEAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAATCCTTAGTTCCAAACATAGAATTGAAGAAATATCATGATAAAGAAAAGGAATTAAAGCGATTAAGAGAAATGAATTGTGTTATGGCAACAGAGAAC
GAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCAAAACGAAAGCTATTGGAGTTGGAGAAGGAAAAC
GATTCTTTAAATACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATGAAGAGATAGAAGCTAAAAAGACCGCTATA
GAAATTGAGGTTCTACAACATTCGATTAAAGAATACAAATCCCAACTTATAGAAGCGAAAAGTAAAAACAGATTTTTGCAAAAAGTCGTCAACAATTCTGAAAGC
CAGTTGCTGATATGTCACAAAGCAAGGAAAGTCGTAACAGATGACTATGCTCAATTAATAGAAAATATCAAGAATGTCGATAGATTTCATGATATGGAAGGACGA
GTACAAGACATTGAGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAATCCTTAGTTCCAAACATAGAATTGAAGAAATATCATGATAAAGAAAAGGAATTAAAGCGATTAAGAGAAATGAATTGTGTTATGGCAACAGAGAAC
GAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCAAAACGAAAGCTATTGGAGTTGGAGAAGGAAAAC
GATTCTTTAAATACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATGAAGAGATAGAAGCTAAAAAGACCGCTATA
GAAATTGAGGTTCTACAACATTCGATTAAAGAATACAAATCCCAACTTATAGAAGCGAAAAGTAAAAACAGATTTTTGCAAAAAGTCGTCAACAATTCTGAAAGC
CAGTTGCTGATATGTCACAAAGCAAGGAAAGTCGTAACAGATGACTATGCTCAATTAATAGAAAATATCAAGAATGTCGATAGATTTCATGATATGGAAGGACGA
GTACAAGACATTGAGGCATAAGTAAGATGATGTTATAGGTCGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGG
Protein sequenceShow/hide protein sequence
MSESLVPNIELKKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKTAI
EIEVLQHSIKEYKSQLIEAKSKNRFLQKVVNNSESQLLICHKARKVVTDDYAQLIENIKNVDRFHDMEGRVQDIEA