; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C030509 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030509
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPolyprotein
Genome locationchr01:26008632..26009188
RNA-Seq ExpressionMELO3C030509
SyntenyMELO3C030509
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033915.1 polyprotein [Cucumis melo var. makuwa]2.0e-5486.05Show/hide
Query:  GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSK
        GSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNF MGSLNTISY SPKILPIK+YNTDMKNHYKRPSP DL  DDL LDF+SFDGNNIETWN DGCS+
Subjt:  GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSK

Query:  GQMMIIFQEMFVATTIYLKRMNQREIVDA
        GQMMIIFQEMFVA T YL+RM+QREIVDA
Subjt:  GQMMIIFQEMFVATTIYLKRMNQREIVDA

KAA0049723.1 polyprotein [Cucumis melo var. makuwa]2.0e-5485.38Show/hide
Query:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS
        KGSSTDELL+ELTRKLSE  ISKEH  TSSKKEISNFGMGSLNTISY SPK  PIKVYNT+MKNHYKRPSP DL WDDL LDF+SFDGNNIETWN DGCS
Subjt:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS

Query:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA
        +GQMMIIFQEMFVA T YL+RM+QREIVDA
Subjt:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA

KAA0068152.1 hypothetical protein E6C27_scaffold238G001190 [Cucumis melo var. makuwa]1.1e-5283.08Show/hide
Query:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS
        KGSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNFGMG+LNTISY S KILPIKVYNT+MKNHYK+PSP DL WDDL  DF+SFD NNIETWN DGCS
Subjt:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS

Query:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA
        +GQM IIFQEMFVA T YL+RM+QREIVDA
Subjt:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA

TYK21071.1 polyprotein [Cucumis melo var. makuwa]1.1e-5283.08Show/hide
Query:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS
        KGSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNFGMG+LNTISY S KILPIKVYNT+MKNHYK+PSP DL WDDL  DF+SFD NNIETWN DGCS
Subjt:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS

Query:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA
        +GQM IIFQEMFVA T YL+RM+QREIVDA
Subjt:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA

TYK23160.1 hypothetical protein E5676_scaffold142G001850 [Cucumis melo var. makuwa]5.7e-4172.87Show/hide
Query:  GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSK
        GSST ELLEELTRKLSE SIS+EHIGTSSK+E+ NFG+ SLNTISY SPKILPIKVYN DMKNHYKR SP DL  D L  DF+SFDGNNIETWN DGCS+
Subjt:  GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSK

Query:  GQMMIIFQEMFVATTIYLKRMNQREIVDA
        GQMMIIFQE++     +L   N+  I DA
Subjt:  GQMMIIFQEMFVATTIYLKRMNQREIVDA

TrEMBL top hitse value%identityAlignment
A0A5A7SXJ8 Polyprotein9.8e-5586.05Show/hide
Query:  GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSK
        GSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNF MGSLNTISY SPKILPIK+YNTDMKNHYKRPSP DL  DDL LDF+SFDGNNIETWN DGCS+
Subjt:  GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSK

Query:  GQMMIIFQEMFVATTIYLKRMNQREIVDA
        GQMMIIFQEMFVA T YL+RM+QREIVDA
Subjt:  GQMMIIFQEMFVATTIYLKRMNQREIVDA

A0A5A7VII9 Uncharacterized protein5.4e-5383.08Show/hide
Query:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS
        KGSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNFGMG+LNTISY S KILPIKVYNT+MKNHYK+PSP DL WDDL  DF+SFD NNIETWN DGCS
Subjt:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS

Query:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA
        +GQM IIFQEMFVA T YL+RM+QREIVDA
Subjt:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA

A0A5D3CLG3 Polyprotein9.8e-5585.38Show/hide
Query:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS
        KGSSTDELL+ELTRKLSE  ISKEH  TSSKKEISNFGMGSLNTISY SPK  PIKVYNT+MKNHYKRPSP DL WDDL LDF+SFDGNNIETWN DGCS
Subjt:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS

Query:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA
        +GQMMIIFQEMFVA T YL+RM+QREIVDA
Subjt:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA

A0A5D3DBQ3 Polyprotein5.4e-5383.08Show/hide
Query:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS
        KGSSTDELLEELTRKLSE SISKE+IGTSSK+E+SNFGMG+LNTISY S KILPIKVYNT+MKNHYK+PSP DL WDDL  DF+SFD NNIETWN DGCS
Subjt:  KGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCS

Query:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA
        +GQM IIFQEMFVA T YL+RM+QREIVDA
Subjt:  KGQMMIIFQEMFVATTIYLKRMNQREIVDA

A0A5D3DIF5 Uncharacterized protein2.8e-4172.87Show/hide
Query:  GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSK
        GSST ELLEELTRKLSE SIS+EHIGTSSK+E+ NFG+ SLNTISY SPKILPIKVYN DMKNHYKR SP DL  D L  DF+SFDGNNIETWN DGCS+
Subjt:  GSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSK

Query:  GQMMIIFQEMFVATTIYLKRMNQREIVDA
        GQMMIIFQE++     +L   N+  I DA
Subjt:  GQMMIIFQEMFVATTIYLKRMNQREIVDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATACAATAACTCTCAAAAAGGATCAAGTACTGATGAGCTTCTTGAAGAACTGACAAGGAAGCTTTCAGAAATATCCATTTCTAAGGAACACATAGGAACCTCGTCCAA
AAAAGAAATTAGTAATTTTGGAATGGGAAGCCTCAATACAATCAGCTATGGTTCTCCAAAAATTCTTCCTATCAAGGTTTACAACACTGATATGAAGAATCATTATAAAA
GGCCATCACCACAAGATCTTAGATGGGATGATTTATGCCTAGATTTTCAATCATTTGATGGAAATAATATCGAAACTTGGAACAATGATGGATGTTCTAAAGGACAGATG
ATGATCATTTTTCAAGAAATGTTTGTTGCTACAACAATCTATCTCAAAAGAATGAATCAAAGAGAGATTGTTGACGCCTAA
mRNA sequenceShow/hide mRNA sequence
TAAATACAATAACTCTCAAAAAGGATCAAGTACTGATGAGCTTCTTGAAGAACTGACAAGGAAGCTTTCAGAAATATCCATTTCTAAGGAACACATAGGAACCTCGTCCA
AAAAAGAAATTAGTAATTTTGGAATGGGAAGCCTCAATACAATCAGCTATGGTTCTCCAAAAATTCTTCCTATCAAGGTTTACAACACTGATATGAAGAATCATTATAAA
AGGCCATCACCACAAGATCTTAGATGGGATGATTTATGCCTAGATTTTCAATCATTTGATGGAAATAATATCGAAACTTGGAACAATGATGGATGTTCTAAAGGACAGAT
GATGATCATTTTTCAAGAAATGTTTGTTGCTACAACAATCTATCTCAAAAGAATGAATCAAAGAGAGATTGTTGACGCCTAACTGCAGGGCTTACAAGAAAACCTTAGGA
GTTGGTGGCACAATCATCTTACTGATGCAAATAGAGAAGCCATAAAGGATGTTGTTTTGGAAAAAACAGAACAAGGACCTAATGGCGACGTTGTTACCATCCAGCCAAAT
TCAGTAA
Protein sequenceShow/hide protein sequence
KYNNSQKGSSTDELLEELTRKLSEISISKEHIGTSSKKEISNFGMGSLNTISYGSPKILPIKVYNTDMKNHYKRPSPQDLRWDDLCLDFQSFDGNNIETWNNDGCSKGQM
MIIFQEMFVATTIYLKRMNQREIVDA