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MELO3C030571 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030571
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPMD domain-containing protein
Genome locationchr04:16462918..16464078
RNA-Seq ExpressionMELO3C030571
SyntenyMELO3C030571
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]3.1e-6986.39Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLF+F QKGSFLR G+F  ASL+AA TIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEGGSIYFG+YEARELIHNGARIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]9.2e-6986.39Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F   SL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEG SIYFG+YEARELIHNGARIQWH +L
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.4e-6987.07Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLP +VRGPKMTNFSGEGGSIYFG+YEARELIHNG RIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]3.1e-6987.07Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF M+YV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEG SIYFG+YEARELIHNGARIQWHTNL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]7.0e-6985.71Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+ AGTIY+LAVPVLANIYHGLGLITKASNP GR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEGGSIYFG+YEAR+LIHNGARIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.5e-6986.39Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLF+F QKGSFLR G+F  ASL+AA TIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEGGSIYFG+YEARELIHNGARIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

A0A5A7SQC9 PMD domain-containing protein4.4e-6986.39Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F   SL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEG SIYFG+YEARELIHNGARIQWH +L
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

A0A5A7UGW6 PMD domain-containing protein6.8e-7087.07Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L IR+DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLP +VRGPKMTNFSGEGGSIYFG+YEARELIHNG RIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

A0A5A7V4F4 PMD domain-containing protein1.5e-6987.07Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+AAGTIY+LAVPVLANIYHGLGLITKASNPIGR+DFHF M+YV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEG SIYFG+YEARELIHNGARIQWHTNL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

A0A5A7VHW8 PMD domain-containing protein3.4e-6985.71Show/hide
Query:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD
        MLFA+L I++DLKDETYLAAFLSCWLCLFVF QKGSFLR G+F  ASL+ AGTIY+LAVPVLANIYHGLGLITKASNP GR+DFHF MHYV+GWLAHYF 
Subjt:  MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFD

Query:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL
        THYPLPT+VRGPKMTNFSGEGGSIYFG+YEAR+LIHNGARIQWH NL
Subjt:  THYPLPTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGCGAAACTTGAAATCAGGAACGATCTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGTTATGCCTTTTTGTATTTCTACAGAAAGGA
TCATTTCTTCGCACCGGAATATTTATGACTGCAAGCTTAATAGCTGCTGGCACTATTTATAATCTTGCGGTTCCAGTTTTGGCGAACATATATCATGGGCTAGGT
TTGATAACCAAAGCCTCTAATCCGATAGGACGCATAGACTTTCACTTTTCCATGCATTACGTCTATGGCTGGTTAGCCCATTATTTTGACACGCATTATCCACTT
CCCACAAAAGTTCGAGGCCCCAAGATGACTAACTTTTCTGGCGAAGGCGGATCTATTTATTTTGGCAAATATGAGGCTCGAGAACTGATCCATAATGGTGCAAGA
ATTCAGTGGCACACTAACCTCTAG
mRNA sequenceShow/hide mRNA sequence
AGCTATGATAAGCCAACCACACGGAAACAAAAGAAGGCGTCACGCTCCAAATCTACCTAGAACCCTGGTAGTTCAAAGATCCAGGCTTGTGAATGGTCCTCTAGG
GAGAACATGTTATTTGCGAAACTTGAAATCAGGAACGATCTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGTTATGCCTTTTTGTATTTCTACAG
AAAGGATCATTTCTTCGCACCGGAATATTTATGACTGCAAGCTTAATAGCTGCTGGCACTATTTATAATCTTGCGGTTCCAGTTTTGGCGAACATATATCATGGG
CTAGGTTTGATAACCAAAGCCTCTAATCCGATAGGACGCATAGACTTTCACTTTTCCATGCATTACGTCTATGGCTGGTTAGCCCATTATTTTGACACGCATTAT
CCACTTCCCACAAAAGTTCGAGGCCCCAAGATGACTAACTTTTCTGGCGAAGGCGGATCTATTTATTTTGGCAAATATGAGGCTCGAGAACTGATCCATAATGGT
GCAAGAATTCAGTGGCACACTAACCTCTAGAACAGGAATAAACATGAACGGATGGTTGATACCCACGATTCATCGTTTCTGCAGACTTCTTATTTCATGAGCATG
CATTCTTGCTACTTGTCCTCTCGCTGTGGAAATACCTGGATTATAACATCATACATTCCATAACGATTTGGATGACAATTTGGCTTTTACCAGGATATCTCTAAT
GATATAGAGGGCATGTCACCTGCGATCACACTAGATAATATGTTATATCACTGAAGAATATGTACGAGGCGTAACACTTTATCTGAGTTATACTTGCCCATCCGT
TTGTTAGAGCCTTGCAAACATGTGATGTAATAGTTTACAGACTGCTGAGCCACGAGGCACGGGACCTATTTTGAGGATAACATACATCATTTGGTGAGTAGTGCC
ATGCCTCCCCCTTCACAACCTAAACTACCCAAGAATTGAGGGAGCTACCTGGGTGGTAAAGAAATTCGCCTGGTTGAGGTGATGACTGCTACTCTCGAAGAGGAG
ATAAAGGAGCATAAAGATGAGAGTGATAGTAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGTATCGAGTGATGATCCCAACGAAAGGGGT
TCAAGT
Protein sequenceShow/hide protein sequence
MLFAKLEIRNDLKDETYLAAFLSCWLCLFVFLQKGSFLRTGIFMTASLIAAGTIYNLAVPVLANIYHGLGLITKASNPIGRIDFHFSMHYVYGWLAHYFDTHYPL
PTKVRGPKMTNFSGEGGSIYFGKYEARELIHNGARIQWHTNL