CuGenDBv2

Gene ID	MELO3C030643
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Genome location	chr07:3066783..3069432
RNA-Seq Expression	MELO3C030643
Synteny	MELO3C030643
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029480 - Transposase-associated domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0056542.1 uncharacterized protein E6C27_scaffold288G00420 [Cucumis melo var. makuwa]

2.3e-23

85.96

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK FLEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

TYJ95864.1 uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa]

2.0e-22

84.21

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK  LEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

TYK16353.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]

2.0e-22

84.21

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK  LEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

TYK20986.1 retrotransposon protein [Cucumis melo var. makuwa]

2.0e-22

84.21

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK  LEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

TYK28867.1 uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa]

2.0e-22

84.21

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK  LEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UL57 Transpos_assoc domain-containing protein

1.1e-23

85.96

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK FLEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

A0A5D3BA83 Uncharacterized protein

9.6e-23

84.21

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK  LEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

A0A5D3BP89 Transpos_assoc domain-containing protein

9.6e-23

84.21

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK  LEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

A0A5D3CWU5 CACTA en-spm transposon protein

9.6e-23

84.21

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK  LEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

A0A5D3DBP2 Retrotransposon protein

9.6e-23

84.21

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Query:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER
        MDKGWMKLRNK  LEYR G TQFLEFAKFH++AYGRLRCPCKRC+NLNW+SL+GVER
Subjt:  MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVER

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGACAAGGGTTGGATGAAACTTAGGAATAAGTTTTTCCTTGAGTATAGAGAGGGAGCGACCCAATTTTTAGAATTTGCCAAGTTTCACATTGAGGCTTACGGACGATT
AAGGTGTCCATGCAAGAGATGTATGAATTTAAATTGGAACTCACTAGATGGAGTGGAACGCATCTACTGA

mRNA sequence

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TTCTGTTGGCTATCCTGCAGTTATGGGACTTAAACCATGGACAAGGGTTGGATGAAACTTAGGAATAAGTTTTTCCTTGAGTATAGAGAGGGAGCGACCCAATTTTTAGA
ATTTGCCAAGTTTCACATTGAGGCTTACGGACGATTAAGGTGTCCATGCAAGAGATGTATGAATTTAAATTGGAACTCACTAGATGGAGTGGAACGCATCTACTGACTAT
TGGAATATCCCCTACTACACAGAATGGGTGTATCATGGATAGTTATTAAGCTTTAAAGGTACAAAAAATTTTGAGGAAGGAACCAGTGGTAACCCTTTTGATGAAGGAAC
TAGTAGTAGGCAGTTTAATGAAGAAGATGATATGTTTGGTATGCTAAATGATTTACAATCCCCGATTAAACAAGAAGAGAAAACGGAGAAACGTCATTTGGAAGATGAAA
TGTCGATGAATATTGGGGTAGTTATAGATGAAGATAGAACAAAGATATTTTAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCCCGGTTGTTCTGAATTTTCGTCG
TTGAATTTTTTTGGTTAAGTTGA

Protein sequence

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MDKGWMKLRNKFFLEYREGATQFLEFAKFHIEAYGRLRCPCKRCMNLNWNSLDGVERIY

MELO3C030643 (gene) of Melon (DHL92) v4 genome