; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C030689 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030689
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr04:8374317..8376914
RNA-Seq ExpressionMELO3C030689
SyntenyMELO3C030689
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]1.5e-12044.05Show/hide
Query:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY
        M EHELA IVN FIASQRQLLL LELLKNDTKRITHIPYE RHRIRQLAYFRMIHG                        TIA LTSTEVVDVEEMVAM+
Subjt:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY

Query:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-----------------------------------------
        LHILAHDVK+RVI+REFMRSGE ISRHFNMVLLAVIRLH ELLKKPQPVPN+CTDQRWR                                         
Subjt:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-----------------------------------------

Query:  ---------------------------GRPR--------------GVPRGVG------------QCW---------------------------------
                                    RP               G P   G            Q W                                 
Subjt:  ---------------------------GRPR--------------GVPRGVG------------QCW---------------------------------

Query:  --WVEVRQRDLSP---------------------------------------------------------------------------------------
          W  +R +   P                                                                                       
Subjt:  --WVEVRQRDLSP---------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------RSHPAAKGLLNK
                                                                                                 SHPAAKGLLNK
Subjt:  ----------------------------------------------------------------------------------------RSHPAAKGLLNK

Query:  LFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTA
         FVHYDELSYVFGKDR+TGGR ESFADIGSNDP GYDA AADA PDTDFP MYS GLNMSPDDLM TR ARVSERRNVSS SKRKRPGHA DSG+IVRTA
Subjt:  LFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTA

Query:  IEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR
        IEY NEQL+ IAEWP+LQRQDA+QTRQEI+R LEAIPELTLMDRCRLM ILMRNVDDMKAFLEVPD++KYPYCS+ILQEN+
Subjt:  IEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-14550.78Show/hide
Query:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY
        M EHELA IVN FIASQRQLLL LELLKNDTKRITHIPYE RHRIRQLAYFRMIHGSDLVCRQSTRMD+RCFAILCHLLRTIA LTSTEVVDVEEMVAM+
Subjt:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY

Query:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-----------------------------------------
        LHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLH ELLKKPQPVPN+CTDQRWR                                         
Subjt:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-----------------------------------------

Query:  ---------------------------GRPR--------------GVPRGVG------------QCW---------------------------------
                                    RP               G P   G            Q W                                 
Subjt:  ---------------------------GRPR--------------GVPRGVG------------QCW---------------------------------

Query:  --WVEVRQRDLSP---------------------------------------------------------------------------------------
          W  +R +   P                                                                                       
Subjt:  --WVEVRQRDLSP---------------------------------------------------------------------------------------

Query:  ---------------------------------------------------RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYD
                                                            SHPAAKGLLNK FVHYDELSYVFGKDR+TGGR ESFADIGSN+P GYD
Subjt:  ---------------------------------------------------RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYD

Query:  AFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIP
        AFAADA PDTDF  MYS GLNMSPDDLM TR ARVSERRNVSS SKRKRPGHA DSG+IVRTAIEY NEQL+ IAEWP+LQRQDA+QTRQEI++QLEAIP
Subjt:  AFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIP

Query:  ELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR
        ELTLMDRCRLM ILMRNVDDMKAFLEVPDN+KYPYCSIILQENR
Subjt:  ELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR

KAA0036791.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-9499.44Show/hide
Query:  RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPG
        +SHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPG
Subjt:  RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPG

Query:  HAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNI
        HAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNI
Subjt:  HAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNI

KAA0041291.1 retrotransposon protein [Cucumis melo var. makuwa]5.2e-9250.93Show/hide
Query:  MDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-------
        MD+RCF ILCHLLRT+A LTS EVVDVEEMVAM+LHI+AHDVKNRVIQREFMRSGE ISRHFNMVLL VIRLH +LLKKPQPV NDCTDQRWR       
Subjt:  MDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-------

Query:  ----------------------GRPRG--VPRGV-------------------GQCWWV-EVRQRDLSP-------------------------------
                               RP G  VP+G                    GQ + + E R  + +P                               
Subjt:  ----------------------GRPRG--VPRGV-------------------GQCWWV-EVRQRDLSP-------------------------------

Query:  ---------------------------------------RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDF
                                               +SHPAAKGLLNK FVHYDELSYVFGKDR+T GR ESFA+ GSND AGYDAF ADAAPD DF
Subjt:  ---------------------------------------RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDF

Query:  PSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMC
        P MYSQGLNMS DDLMGTR ARVSERRN+SS SK+KR GHA DSG+IVRTAIE                                          CRLM 
Subjt:  PSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMC

Query:  ILMRNVDDMKAFLEVPDNIKYPYCSIILQENR
        ILMRNVDDMKAFL+V DN+KYPYCSIILQENR
Subjt:  ILMRNVDDMKAFLEVPDNIKYPYCSIILQENR

KAA0046928.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-10559.15Show/hide
Query:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY
        M EHELA IVN FIASQRQLLL LELLKNDTKRITHIPYE RHRIRQLAYFRMIHGSDLVC      D++  + L                         
Subjt:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY

Query:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRGRPRGVPRGVGQCWWVEVRQRDLSPRSHPAAKGLLNKLFVH
                                                                                     R++ L+   HPAAKGLLNK FVH
Subjt:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRGRPRGVPRGVGQCWWVEVRQRDLSPRSHPAAKGLLNKLFVH

Query:  YDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYE
        YDELSYVFGKDR+TGGR E FADIGSNDP G+DAFAADA PDTDFP  YS GLNMSPDDLM TR ARVSERRNVSS SKRKRPGHA DSG+IVRTAIEY 
Subjt:  YDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYE

Query:  NEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR
        NEQL+ IAEWP+LQRQDA+QTRQEI+R LEAIPELTLMDRCRLM ILMRNVDDMKAFLEVPD++KYPYC++ILQEN+
Subjt:  NEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein6.7e-14650.78Show/hide
Query:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY
        M EHELA IVN FIASQRQLLL LELLKNDTKRITHIPYE RHRIRQLAYFRMIHGSDLVCRQSTRMD+RCFAILCHLLRTIA LTSTEVVDVEEMVAM+
Subjt:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY

Query:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-----------------------------------------
        LHILAHDVKNRVIQREFMRSGE ISRHFNMVLLAVIRLH ELLKKPQPVPN+CTDQRWR                                         
Subjt:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-----------------------------------------

Query:  ---------------------------GRPR--------------GVPRGVG------------QCW---------------------------------
                                    RP               G P   G            Q W                                 
Subjt:  ---------------------------GRPR--------------GVPRGVG------------QCW---------------------------------

Query:  --WVEVRQRDLSP---------------------------------------------------------------------------------------
          W  +R +   P                                                                                       
Subjt:  --WVEVRQRDLSP---------------------------------------------------------------------------------------

Query:  ---------------------------------------------------RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYD
                                                            SHPAAKGLLNK FVHYDELSYVFGKDR+TGGR ESFADIGSN+P GYD
Subjt:  ---------------------------------------------------RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYD

Query:  AFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIP
        AFAADA PDTDF  MYS GLNMSPDDLM TR ARVSERRNVSS SKRKRPGHA DSG+IVRTAIEY NEQL+ IAEWP+LQRQDA+QTRQEI++QLEAIP
Subjt:  AFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIP

Query:  ELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR
        ELTLMDRCRLM ILMRNVDDMKAFLEVPDN+KYPYCSIILQENR
Subjt:  ELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR

A0A5A7TI01 Retrotransposon protein2.5e-9250.93Show/hide
Query:  MDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-------
        MD+RCF ILCHLLRT+A LTS EVVDVEEMVAM+LHI+AHDVKNRVIQREFMRSGE ISRHFNMVLL VIRLH +LLKKPQPV NDCTDQRWR       
Subjt:  MDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-------

Query:  ----------------------GRPRG--VPRGV-------------------GQCWWV-EVRQRDLSP-------------------------------
                               RP G  VP+G                    GQ + + E R  + +P                               
Subjt:  ----------------------GRPRG--VPRGV-------------------GQCWWV-EVRQRDLSP-------------------------------

Query:  ---------------------------------------RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDF
                                               +SHPAAKGLLNK FVHYDELSYVFGKDR+T GR ESFA+ GSND AGYDAF ADAAPD DF
Subjt:  ---------------------------------------RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDF

Query:  PSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMC
        P MYSQGLNMS DDLMGTR ARVSERRN+SS SK+KR GHA DSG+IVRTAIE                                          CRLM 
Subjt:  PSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMC

Query:  ILMRNVDDMKAFLEVPDNIKYPYCSIILQENR
        ILMRNVDDMKAFL+V DN+KYPYCSIILQENR
Subjt:  ILMRNVDDMKAFLEVPDNIKYPYCSIILQENR

A0A5A7TVM3 Retrotransposon protein2.0e-10559.15Show/hide
Query:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY
        M EHELA IVN FIASQRQLLL LELLKNDTKRITHIPYE RHRIRQLAYFRMIHGSDLVC      D++  + L                         
Subjt:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY

Query:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRGRPRGVPRGVGQCWWVEVRQRDLSPRSHPAAKGLLNKLFVH
                                                                                     R++ L+   HPAAKGLLNK FVH
Subjt:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRGRPRGVPRGVGQCWWVEVRQRDLSPRSHPAAKGLLNKLFVH

Query:  YDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYE
        YDELSYVFGKDR+TGGR E FADIGSNDP G+DAFAADA PDTDFP  YS GLNMSPDDLM TR ARVSERRNVSS SKRKRPGHA DSG+IVRTAIEY 
Subjt:  YDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYE

Query:  NEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR
        NEQL+ IAEWP+LQRQDA+QTRQEI+R LEAIPELTLMDRCRLM ILMRNVDDMKAFLEVPD++KYPYC++ILQEN+
Subjt:  NEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR

A0A5D3BC43 Retrotransposon protein7.1e-9599.44Show/hide
Query:  RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPG
        +SHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPG
Subjt:  RSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPG

Query:  HAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNI
        HAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNI
Subjt:  HAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNI

E5GCB5 Retrotransposon protein7.5e-12144.05Show/hide
Query:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY
        M EHELA IVN FIASQRQLLL LELLKNDTKRITHIPYE RHRIRQLAYFRMIHG                        TIA LTSTEVVDVEEMVAM+
Subjt:  MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMY

Query:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-----------------------------------------
        LHILAHDVK+RVI+REFMRSGE ISRHFNMVLLAVIRLH ELLKKPQPVPN+CTDQRWR                                         
Subjt:  LHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWR-----------------------------------------

Query:  ---------------------------GRPR--------------GVPRGVG------------QCW---------------------------------
                                    RP               G P   G            Q W                                 
Subjt:  ---------------------------GRPR--------------GVPRGVG------------QCW---------------------------------

Query:  --WVEVRQRDLSP---------------------------------------------------------------------------------------
          W  +R +   P                                                                                       
Subjt:  --WVEVRQRDLSP---------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------RSHPAAKGLLNK
                                                                                                 SHPAAKGLLNK
Subjt:  ----------------------------------------------------------------------------------------RSHPAAKGLLNK

Query:  LFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTA
         FVHYDELSYVFGKDR+TGGR ESFADIGSNDP GYDA AADA PDTDFP MYS GLNMSPDDLM TR ARVSERRNVSS SKRKRPGHA DSG+IVRTA
Subjt:  LFVHYDELSYVFGKDRSTGGRVESFADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTA

Query:  IEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR
        IEY NEQL+ IAEWP+LQRQDA+QTRQEI+R LEAIPELTLMDRCRLM ILMRNVDDMKAFLEVPD++KYPYCS+ILQEN+
Subjt:  IEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLEAIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.7e-1234.82Show/hide
Query:  FRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRL---------HGE
        +++++G +  C ++ RMD+  F  LC LL+T   L  T  + +E  +A++L I+ H+++ R +Q  F  SGE ISRHFN VL AVI +         + +
Subjt:  FRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKNRVIQREFMRSGEIISRHFNMVLLAVIRL---------HGE

Query:  LLKKPQPVPNDC
         L+   P   DC
Subjt:  LLKKPQPVPNDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAACACGAGTTGGCGTATATTGTAAATGTGTTCATAGCATCCCAACGTCAGTTGTTACTAACGTTGGAGCTCTTGAAGAACGATACGAAGAGGATAACGCACAT
CCCGTATGAAATTAGGCATAGGATTAGACAGTTAGCTTACTTTCGCATGATTCATGGCTCAGACCTTGTGTGTCGCCAAAGTACGAGAATGGACCAAAGATGTTTCGCCA
TTCTGTGTCACCTACTGAGGACCATTGCTGAATTAACGTCGACAGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTACCTCCACATTCTTGCGCACGACGTGAAAAAT
CGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGATAATTTCCCGTCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATGGGGAGCTTTTGAAAAAACCACA
ACCAGTGCCTAATGATTGCACAGATCAAAGATGGAGAGGCAGGCCTCGTGGAGTGCCTCGTGGAGTTGGTCAATGTTGGTGGGTGGAGGTTCGACAACGAGACCTTTCGC
CCCGGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTTGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTTCAACAGGAGGCCGAGTCGAGAGT
TTTGCGGACATTGGATCAAACGATCCTGCTGGGTATGACGCATTTGCTGCTGACGCTGCACCGGATACGGACTTCCCATCAATGTACAGTCAAGGATTGAACATGTCGCC
TGATGATTTGATGGGAACAAGAATCGCTAGGGTTAGTGAACGTAGAAATGTTTCAAGCAGGTCTAAGCGAAAACGTCCAGGACATGCCATAGATAGTGGGAACATAGTTC
GTACTGCTATTGAGTACGAAAATGAACAACTGAATCACATTGCTGAATGGCCTGTCCTACAACGTCAAGACGCAAGCCAAACACGTCAAGAGATTATTCGACAATTGGAG
GCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGTGTATACTTATGCGTAACGTTGATGACATGAAAGCTTTCCTTGAAGTTCCCGATAATATAAAGTACCC
GTACTGCAGCATCATTCTTCAAGAAAACCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAACACGAGTTGGCGTATATTGTAAATGTGTTCATAGCATCCCAACGTCAGTTGTTACTAACGTTGGAGCTCTTGAAGAACGATACGAAGAGGATAACGCACAT
CCCGTATGAAATTAGGCATAGGATTAGACAGTTAGCTTACTTTCGCATGATTCATGGCTCAGACCTTGTGTGTCGCCAAAGTACGAGAATGGACCAAAGATGTTTCGCCA
TTCTGTGTCACCTACTGAGGACCATTGCTGAATTAACGTCGACAGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTACCTCCACATTCTTGCGCACGACGTGAAAAAT
CGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGATAATTTCCCGTCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATGGGGAGCTTTTGAAAAAACCACA
ACCAGTGCCTAATGATTGCACAGATCAAAGATGGAGAGGCAGGCCTCGTGGAGTGCCTCGTGGAGTTGGTCAATGTTGGTGGGTGGAGGTTCGACAACGAGACCTTTCGC
CCCGGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTTGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTTCAACAGGAGGCCGAGTCGAGAGT
TTTGCGGACATTGGATCAAACGATCCTGCTGGGTATGACGCATTTGCTGCTGACGCTGCACCGGATACGGACTTCCCATCAATGTACAGTCAAGGATTGAACATGTCGCC
TGATGATTTGATGGGAACAAGAATCGCTAGGGTTAGTGAACGTAGAAATGTTTCAAGCAGGTCTAAGCGAAAACGTCCAGGACATGCCATAGATAGTGGGAACATAGTTC
GTACTGCTATTGAGTACGAAAATGAACAACTGAATCACATTGCTGAATGGCCTGTCCTACAACGTCAAGACGCAAGCCAAACACGTCAAGAGATTATTCGACAATTGGAG
GCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGTGTATACTTATGCGTAACGTTGATGACATGAAAGCTTTCCTTGAAGTTCCCGATAATATAAAGTACCC
GTACTGCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTGGAC
Protein sequenceShow/hide protein sequence
MGEHELAYIVNVFIASQRQLLLTLELLKNDTKRITHIPYEIRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAELTSTEVVDVEEMVAMYLHILAHDVKN
RVIQREFMRSGEIISRHFNMVLLAVIRLHGELLKKPQPVPNDCTDQRWRGRPRGVPRGVGQCWWVEVRQRDLSPRSHPAAKGLLNKLFVHYDELSYVFGKDRSTGGRVES
FADIGSNDPAGYDAFAADAAPDTDFPSMYSQGLNMSPDDLMGTRIARVSERRNVSSRSKRKRPGHAIDSGNIVRTAIEYENEQLNHIAEWPVLQRQDASQTRQEIIRQLE
AIPELTLMDRCRLMCILMRNVDDMKAFLEVPDNIKYPYCSIILQENR