; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C030690 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030690
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr04:8502809..8505525
RNA-Seq ExpressionMELO3C030690
SyntenyMELO3C030690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041779.1 uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa]2.9e-9268.38Show/hide
Query:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP
        +V++RRI D VN+ DK+ S +S+M LI KAGL KTISN  PFY QLIREFIVNLP +FNDPSS DYQTV+I+G KF ISPTVINGFL+N V+ + SPS P
Subjt:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP

Query:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL
          + LA VLS GTLST PVNGIP  +LS+KY ILHKID ANWFPSSHASS+S ALGTFLYQICNDD V+TG FIYNQLLRHVG+F ++I I     FS L
Subjt:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL

Query:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVEL
        L+HLN  VLT  DAP PEPKT++LS+RLFQGSHVPDI+HD+ P++ PR +  L
Subjt:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVEL

KAA0054676.1 uncharacterized protein E6C27_scaffold24G004970 [Cucumis melo var. makuwa]1.1e-9475.62Show/hide
Query:  ITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLA
        I DEVNV DKHH YLSVM LI KA LSKTISN  PFY QLIREFIVNLP +FN+PSSL+YQ V+I GLKF IS  +INGFL NNVE NSSPSNPSN+ LA
Subjt:  ITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLA

Query:  LVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNV
         VLSRGTLS   VNGIPV+SL++KYVILHKI  ANWF SS ASS+S+ALGTFLYQI ND+T+  GLFIYN LLRHV TFG++I I L  FFSCLL+HLNV
Subjt:  LVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNV

Query:  VVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPR
         VLTTLDAP P+PKTLSLSYRLFQ SHVPDIEHDM  S+ PR
Subjt:  VVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPR

TYK27067.1 uncharacterized protein E5676_scaffold95G00660 [Cucumis melo var. makuwa]2.9e-9268.38Show/hide
Query:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP
        +V++RRI D VN+ DK+ S +S+M LI KAGL KTISN  PFY QLIREFIVNLP +FNDPSS DYQTV+I+G KF ISPTVINGFL+N V+ + SPS P
Subjt:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP

Query:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL
          + LA VLS GTLST PVNGIP  +LS+KY ILHKID ANWFPSSHASS+S ALGTFLYQICNDD V+TG FIYNQLLRHVG+F ++I I     FS L
Subjt:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL

Query:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVEL
        L+HLN  VLT  DAP PEPKT++LS+RLFQGSHVPDI+HD+ P++ PR +  L
Subjt:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVEL

XP_008454690.1 PREDICTED: uncharacterized protein LOC103495044 [Cucumis melo]6.5e-124100Show/hide
Query:  MGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLALVLSRGTLSTRPVNGIP
        MGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLALVLSRGTLSTRPVNGIP
Subjt:  MGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLALVLSRGTLSTRPVNGIP

Query:  VVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNVVVLTTLDAPRPEPKTLS
        VVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNVVVLTTLDAPRPEPKTLS
Subjt:  VVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNVVVLTTLDAPRPEPKTLS

Query:  LSYRLFQGSHVPDIEHDMRPSKAPR
        LSYRLFQGSHVPDIEHDMRPSKAPR
Subjt:  LSYRLFQGSHVPDIEHDMRPSKAPR

XP_008463460.1 PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo]5.0e-9270.16Show/hide
Query:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP
        +VL+RRITDEVN+ DKHH  +S+M LIEKAGLSK IS+  PFYSQLIREFIVNLP DFNDPSS DYQ V+I+GLKF IS  VINGFL N V  + S S+P
Subjt:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP

Query:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL
        S   LA VLS+GTLS  P NG P V+LS+KYVILHKI  ANWFPSSHASS+SVALGTFL++ICND+ VD   FIYNQLLRHVG+FG+++ I LP FFS L
Subjt:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL

Query:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPR
        L+HLN  VLTTL  P   PKTLSLSY+LFQ SHVPDI+HDM PS+ P+
Subjt:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPR

TrEMBL top hitse value%identityAlignment
A0A1S3C0E9 uncharacterized protein LOC1034950443.1e-124100Show/hide
Query:  MGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLALVLSRGTLSTRPVNGIP
        MGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLALVLSRGTLSTRPVNGIP
Subjt:  MGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLALVLSRGTLSTRPVNGIP

Query:  VVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNVVVLTTLDAPRPEPKTLS
        VVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNVVVLTTLDAPRPEPKTLS
Subjt:  VVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNVVVLTTLDAPRPEPKTLS

Query:  LSYRLFQGSHVPDIEHDMRPSKAPR
        LSYRLFQGSHVPDIEHDMRPSKAPR
Subjt:  LSYRLFQGSHVPDIEHDMRPSKAPR

A0A5A7SJK4 Uncharacterized protein2.4e-9270.16Show/hide
Query:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP
        +VL+RRITDEVN+ DKHH  +S+M LIEKAGLSK IS+  PFYSQLIREFIVNLP DFNDPSS DYQ V+I+GLKF IS  VINGFL N V  + S S+P
Subjt:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP

Query:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL
        S   LA VLS+GTLS  P NG P V+LS+KYVILHKI  ANWFPSSHASS+SVALGTFL++ICND+ VD   FIYNQLLRHVG+FG+++ I LP FFS L
Subjt:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL

Query:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPR
        L+HLN  VLTTL  P   PKTLSLSY+LFQ SHVPDI+HDM PS+ P+
Subjt:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPR

A0A5A7TK74 Uncharacterized protein1.4e-9268.38Show/hide
Query:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP
        +V++RRI D VN+ DK+ S +S+M LI KAGL KTISN  PFY QLIREFIVNLP +FNDPSS DYQTV+I+G KF ISPTVINGFL+N V+ + SPS P
Subjt:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP

Query:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL
          + LA VLS GTLST PVNGIP  +LS+KY ILHKID ANWFPSSHASS+S ALGTFLYQICNDD V+TG FIYNQLLRHVG+F ++I I     FS L
Subjt:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL

Query:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVEL
        L+HLN  VLT  DAP PEPKT++LS+RLFQGSHVPDI+HD+ P++ PR +  L
Subjt:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVEL

A0A5D3CAN5 Uncharacterized protein5.2e-9575.62Show/hide
Query:  ITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLA
        I DEVNV DKHH YLSVM LI KA LSKTISN  PFY QLIREFIVNLP +FN+PSSL+YQ V+I GLKF IS  +INGFL NNVE NSSPSNPSN+ LA
Subjt:  ITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLA

Query:  LVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNV
         VLSRGTLS   VNGIPV+SL++KYVILHKI  ANWF SS ASS+S+ALGTFLYQI ND+T+  GLFIYN LLRHV TFG++I I L  FFSCLL+HLNV
Subjt:  LVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNV

Query:  VVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPR
         VLTTLDAP P+PKTLSLSYRLFQ SHVPDIEHDM  S+ PR
Subjt:  VVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPR

A0A5D3DTI5 Uncharacterized protein1.4e-9268.38Show/hide
Query:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP
        +V++RRI D VN+ DK+ S +S+M LI KAGL KTISN  PFY QLIREFIVNLP +FNDPSS DYQTV+I+G KF ISPTVINGFL+N V+ + SPS P
Subjt:  YVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNP

Query:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL
          + LA VLS GTLST PVNGIP  +LS+KY ILHKID ANWFPSSHASS+S ALGTFLYQICNDD V+TG FIYNQLLRHVG+F ++I I     FS L
Subjt:  SNKFLALVLSRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCL

Query:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVEL
        L+HLN  VLT  DAP PEPKT++LS+RLFQGSHVPDI+HD+ P++ PR +  L
Subjt:  LVHLNVVVLTTLDAPRPEPKTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGTTTTGCGGCGAAGGATTACAGATGAGGTAAATGTTTACGATAAACATCATTCCTATTTAAGTGTTATGGGACTTATTGAAAAGGCTGGTCTCTCCAAGACGAT
ATCAAATGCTAGACCTTTCTATTCTCAGTTAATTAGGGAATTTATTGTAAATCTACCTTTTGACTTTAACGATCCTAGTAGTCTGGACTACCAAACAGTTTACATTCAAG
GCTTAAAATTCAACATTTCTCCTACAGTAATTAATGGGTTTTTGGATAACAATGTCGAACCAAATTCTTCACCCTCAAACCCATCAAATAAATTTTTGGCTCTTGTGTTA
TCTAGAGGGACTCTATCTACTAGGCCTGTAAATGGAATTCCAGTTGTATCTCTCAGTATAAAGTATGTCATTCTTCATAAGATTGATTTTGCAAACTGGTTTCCATCTTC
ACATGCTTCCAGTATGTCTGTTGCTTTGGGAACATTTCTTTATCAGATATGCAATGACGACACTGTAGATACAGGCCTCTTTATATATAACCAGCTTCTAAGGCATGTAG
GAACTTTTGGTCTTAGAATACATATTGTTTTACCGCATTTTTTCTCATGCTTATTAGTTCATCTAAATGTTGTGGTACTAACAACCCTTGATGCCCCTAGACCTGAACCA
AAGACTTTATCTCTGAGTTATAGACTTTTTCAGGGAAGTCATGTTCCAGATATAGAACATGACATGCGACCTTCAAAGGCTCCTAGATTCGTTGTTGAACTGATAAAAAA
CTTTTTATCTCCTCAAGTTGATCTTAAGGTGGGCAAAACATCCGCGAGACTAGTGGGGTTGGCCATGAGTTATATAATGTTAGGAATGAGCTTTGCTAGAATGGATCCAA
GTCTCCCTGATGTTTTCAACATTGAGATTAATACGAAGAAATTAGTCCTCCACATGTTGAAGAATTTTTTTTATATCACAAACAATGCCTACAGTAGAGAAGAGGTAGTC
GAGATGGAGGCTAAAATATTAAAGTTGTTGTGTCTATTCCCAAAACCGCAGCGACTCATGGTGATAGCAGCCAATTGGCAACAATGTCCAATTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGTTTTGCGGCGAAGGATTACAGATGAGGTAAATGTTTACGATAAACATCATTCCTATTTAAGTGTTATGGGACTTATTGAAAAGGCTGGTCTCTCCAAGACGAT
ATCAAATGCTAGACCTTTCTATTCTCAGTTAATTAGGGAATTTATTGTAAATCTACCTTTTGACTTTAACGATCCTAGTAGTCTGGACTACCAAACAGTTTACATTCAAG
GCTTAAAATTCAACATTTCTCCTACAGTAATTAATGGGTTTTTGGATAACAATGTCGAACCAAATTCTTCACCCTCAAACCCATCAAATAAATTTTTGGCTCTTGTGTTA
TCTAGAGGGACTCTATCTACTAGGCCTGTAAATGGAATTCCAGTTGTATCTCTCAGTATAAAGTATGTCATTCTTCATAAGATTGATTTTGCAAACTGGTTTCCATCTTC
ACATGCTTCCAGTATGTCTGTTGCTTTGGGAACATTTCTTTATCAGATATGCAATGACGACACTGTAGATACAGGCCTCTTTATATATAACCAGCTTCTAAGGCATGTAG
GAACTTTTGGTCTTAGAATACATATTGTTTTACCGCATTTTTTCTCATGCTTATTAGTTCATCTAAATGTTGTGGTACTAACAACCCTTGATGCCCCTAGACCTGAACCA
AAGACTTTATCTCTGAGTTATAGACTTTTTCAGGGAAGTCATGTTCCAGATATAGAACATGACATGCGACCTTCAAAGGCTCCTAGATTCGTTGTTGAACTGATAAAAAA
CTTTTTATCTCCTCAAGTTGATCTTAAGGTGGGCAAAACATCCGCGAGACTAGTGGGGTTGGCCATGAGTTATATAATGTTAGGAATGAGCTTTGCTAGAATGGATCCAA
GTCTCCCTGATGTTTTCAACATTGAGATTAATACGAAGAAATTAGTCCTCCACATGTTGAAGAATTTTTTTTATATCACAAACAATGCCTACAGTAGAGAAGAGGTAGTC
GAGATGGAGGCTAAAATATTAAAGTTGTTGTGTCTATTCCCAAAACCGCAGCGACTCATGGTGATAGCAGCCAATTGGCAACAATGTCCAATTAGCTAA
Protein sequenceShow/hide protein sequence
MYVLRRRITDEVNVYDKHHSYLSVMGLIEKAGLSKTISNARPFYSQLIREFIVNLPFDFNDPSSLDYQTVYIQGLKFNISPTVINGFLDNNVEPNSSPSNPSNKFLALVL
SRGTLSTRPVNGIPVVSLSIKYVILHKIDFANWFPSSHASSMSVALGTFLYQICNDDTVDTGLFIYNQLLRHVGTFGLRIHIVLPHFFSCLLVHLNVVVLTTLDAPRPEP
KTLSLSYRLFQGSHVPDIEHDMRPSKAPRFVVELIKNFLSPQVDLKVGKTSARLVGLAMSYIMLGMSFARMDPSLPDVFNIEINTKKLVLHMLKNFFYITNNAYSREEVV
EMEAKILKLLCLFPKPQRLMVIAANWQQCPIS