CuGenDBv2

Gene ID	MELO3C030865
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Beta-galactosidase
Genome location	chr04:19358180..19362463
RNA-Seq Expression	MELO3C030865
Synteny	MELO3C030865
Gene Ontology terms	GO:0000723 - telomere maintenance (biological process) GO:0006303 - double-strand break repair via nonhomologous end joining (biological process) GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0043564 - Ku70:Ku80 complex (cellular component) GO:0003678 - DNA helicase activity (molecular function) GO:0003684 - damaged DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function) GO:0042162 - telomeric DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025289.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.5e-68

79.76

Show/hide

Query:  LPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSK
        +P S+QKV HAP  FH+ AQPIP YAP DVQ   P GHPH H  P+ SGQQ ST+NLSNLYSKHPLYVD LQQPLFSG  IDQPQNRSDIEAGKSSTHSK
Subjt:  LPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSK

Query:  PTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        PTKLPMYSKN +TSFPNL SNYIT SLGS  GNFSGEKLN QNYFSWSQS+KMFLEG HQFDFLT ET
Subjt:  PTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.0e-62

74.25

Show/hide

Query:  PLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKP
        PL +    HAP  FH+ A P+P YAP DVQ   P GHPH HAP   SGQ  ST+NLSN YSK  LYVDPLQQPLFSG  IDQPQNRSDIEAG+SSTHSKP
Subjt:  PLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKP

Query:  TKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        T+LPMYSKN +TSFPN  SNYITGSLGS  GNFSGEKLN QNYFSWSQS+KMFLEG +QF FLTGET
Subjt:  TKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

KAA0032571.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.2e-62

72.88

Show/hide

Query:  PLSNQKVTHA----------PTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIE
        P S+QKV HA          P  FH+ AQP+  YAP DVQ   PFGHPH HAPPM SGQQ ST+NL NLYSKHPLYVD L+Q LFSG  IDQPQNRSD E
Subjt:  PLSNQKVTHA----------PTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIE

Query:  AGKSSTHSKPTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        AG+ STHSKPT+LPMYSKN ITSFPNL SNYIT SLGS  GNFS EKLN QNYFSWSQS+KMFLEG HQF FLTGET
Subjt:  AGKSSTHSKPTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

KAA0056107.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.2e-62

74.25

Show/hide

Query:  PLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKP
        PL +    HAP  FH+ A P+P YAP DVQ   P GHPH HAP   SGQ  ST+NLSN YSK  LYVDPLQQPLFSG  IDQPQNRSDIEAG+SSTHSKP
Subjt:  PLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKP

Query:  TKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        T+LPMYSKN +TSFPN  SNYITGSLGS  GNFSGEKLN QNYFSWSQS+KMFLEG +QF FLTGET
Subjt:  TKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

TYK07380.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.5e-68

79.76

Show/hide

Query:  LPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSK
        +P S+QKV HAP  FH+ AQPIP YAP DVQ   P GHPH H  P+ SGQQ ST+NLSNLYSKHPLYVD LQQPLFSG  IDQPQNRSDIEAGKSSTHSK
Subjt:  LPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSK

Query:  PTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        PTKLPMYSKN +TSFPNL SNYIT SLGS  GNFSGEKLN QNYFSWSQS+KMFLEG HQFDFLT ET
Subjt:  PTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SJ13 Beta-galactosidase

1.2e-68

79.76

Show/hide

Query:  LPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSK
        +P S+QKV HAP  FH+ AQPIP YAP DVQ   P GHPH H  P+ SGQQ ST+NLSNLYSKHPLYVD LQQPLFSG  IDQPQNRSDIEAGKSSTHSK
Subjt:  LPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSK

Query:  PTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        PTKLPMYSKN +TSFPNL SNYIT SLGS  GNFSGEKLN QNYFSWSQS+KMFLEG HQFDFLT ET
Subjt:  PTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

A0A5A7SSP2 Beta-galactosidase

5.8e-63

72.88

Show/hide

Query:  PLSNQKVTHA----------PTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIE
        P S+QKV HA          P  FH+ AQP+  YAP DVQ   PFGHPH HAPPM SGQQ ST+NL NLYSKHPLYVD L+Q LFSG  IDQPQNRSD E
Subjt:  PLSNQKVTHA----------PTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIE

Query:  AGKSSTHSKPTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        AG+ STHSKPT+LPMYSKN ITSFPNL SNYIT SLGS  GNFS EKLN QNYFSWSQS+KMFLEG HQF FLTGET
Subjt:  AGKSSTHSKPTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

A0A5A7UNC5 Beta-galactosidase

5.8e-63

74.25

Show/hide

Query:  PLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKP
        PL +    HAP  FH+ A P+P YAP DVQ   P GHPH HAP   SGQ  ST+NLSN YSK  LYVDPLQQPLFSG  IDQPQNRSDIEAG+SSTHSKP
Subjt:  PLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKP

Query:  TKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        T+LPMYSKN +TSFPN  SNYITGSLGS  GNFSGEKLN QNYFSWSQS+KMFLEG +QF FLTGET
Subjt:  TKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

A0A5A7VLQ7 Beta-galactosidase

9.9e-63

74.25

Show/hide

Query:  PLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKP
        PL +    HAP  FH+ A P+P YAP DVQ   P GHPH HAP   SGQ  ST+NLSN YSK  LYVDPLQQPLFSG  IDQPQNRSDIEAG+SSTHSKP
Subjt:  PLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKP

Query:  TKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        T+LPMYSKN +TSFPN  SNYITGSLGS  GNFSGEKLN QNYFSWSQS+KMFLEG +QF FLTGET
Subjt:  TKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

A0A5D3C7S0 Beta-galactosidase

1.2e-68

79.76

Show/hide

Query:  LPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSK
        +P S+QKV HAP  FH+ AQPIP YAP DVQ   P GHPH H  P+ SGQQ ST+NLSNLYSKHPLYVD LQQPLFSG  IDQPQNRSDIEAGKSSTHSK
Subjt:  LPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQLSTINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSK

Query:  PTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET
        PTKLPMYSKN +TSFPNL SNYIT SLGS  GNFSGEKLN QNYFSWSQS+KMFLEG HQFDFLT ET
Subjt:  PTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEGHHQFDFLTGET

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTTTGATACATGGGCAACCAGAAAGTGTCATACTAATCTCTAACTCATTCTTCAGCATTTCCAACACTTTTTTGAAAATTAAGCCTATAAACACTTCATTC
ACCTTTAAACTTGAAACCGCCAATCTACCCAACAGGAGTAGTCTCGCAGCCATACTGCCGCTGTCTAACCAAAAAGTGACTCACGCGCCGACGTCGTTTCATCTC
ATTGCCCAGCCCATTCCACTCTATGCGCCATTGGATGTTCAACTGTTATACCCTTTCGGCCATCCGCATTCCCACGCGCCGCCTATGTTCTCCGGACAACAACTG
TCAACTATAAATCTGTCAAATCTGTACAGTAAGCATCCACTGTATGTTGACCCTTTACAGCAACCGTTGTTTTCTGGTACCGAGATTGATCAACCCCAAAACAGA
TCGGACATTGAAGCGGGCAAGTCTTCGACGCATTCCAAACCAACCAAGTTACCAATGTATTCCAAGAACTCGATAACTTCATTCCCTAATTTACTGTCAAATTAT
ATAACTGGCTCTTTGGGTTCGTATATAGGAAACTTTTCAGGTGAAAAATTAAATGAGCAAAATTATTTCTCTTGGTCCCAATCAGTAAAGATGTTTCTTGAAGGT
CACCACCAGTTCGACTTCTTAACTGGAGAGACTTATGGAACCTCAGATCTGCAAGCCTCTACTATATGCAGCCAT

mRNA sequence

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Protein sequence

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MSLIHGQPESVILISNSFFSISNTFLKIKPINTSFTFKLETANLPNRSSLAAILPLSNQKVTHAPTSFHLIAQPIPLYAPLDVQLLYPFGHPHSHAPPMFSGQQL
STINLSNLYSKHPLYVDPLQQPLFSGTEIDQPQNRSDIEAGKSSTHSKPTKLPMYSKNSITSFPNLLSNYITGSLGSYIGNFSGEKLNEQNYFSWSQSVKMFLEG
HHQFDFLTGETYGTSDLQASTICSH

MELO3C030865 (gene) of Melon (DHL92) v4 genome