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MELO3C030954 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C030954
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr04:15921004..15921243
RNA-Seq ExpressionMELO3C030954
SyntenyMELO3C030954
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048405.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-3298.65Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVG DQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
KAA0056563.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-33100Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
KAA0062452.1 hypothetical protein E6C27_scaffold130G00330 [Cucumis melo var. makuwa]1.3e-3197.3Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNF AY VRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
TYK08719.1 hypothetical protein E5676_scaffold76G00220 [Cucumis melo var. makuwa]7.7e-3297.3Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVG DQVDRRGRGEVSETSSLKRYIW STKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
TYK27431.1 hypothetical protein E5676_scaffold325G001260 [Cucumis melo var. makuwa]7.0e-3398.65Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNF AYCVRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
TrEMBL top hitse value%identityAlignment
A0A5A7U437 Retrotransposon protein5.7e-3398.65Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVG DQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
A0A5A7UL03 Retrotransposon protein6.8e-34100Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
A0A5A7V2L2 Uncharacterized protein6.3e-3297.3Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNF AY VRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
A0A5D3CED6 Uncharacterized protein3.7e-3297.3Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVG DQVDRRGRGEVSETSSLKRYIW STKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
A0A5D3DUQ6 Uncharacterized protein3.4e-3398.65Show/hide
Query:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
        MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNF AYCVRC
Subjt:  MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTG
GCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGAT
GCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTG
GCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGAT
GCTAGAACTTACGAGTTTGG
Protein sequenceShow/hide protein sequence
MYVHPDLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCARNFSAYCVRC