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MELO3C031004 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031004
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTatD related DNase
Genome locationchr04:30094432..30096758
RNA-Seq ExpressionMELO3C031004
SyntenyMELO3C031004
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0061025 - membrane fusion (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005484 - SNAP receptor activity (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
InterPro domainsIPR001130 - TatD family
IPR018228 - Deoxyribonuclease, TatD-related, conserved site
IPR032466 - Metal-dependent hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043804.1 putative deoxyribonuclease TATDN1 isoform X1 [Cucumis melo var. makuwa]1.2e-77100Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

XP_008442932.1 PREDICTED: putative deoxyribonuclease TATDN1 isoform X1 [Cucumis melo]1.2e-77100Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

XP_008442933.1 PREDICTED: putative deoxyribonuclease TATDN1 isoform X2 [Cucumis melo]1.2e-77100Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

XP_008442934.1 PREDICTED: putative deoxyribonuclease TATDN1 isoform X3 [Cucumis melo]1.2e-77100Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

XP_031737690.1 putative deoxyribonuclease TATDN1 isoform X1 [Cucumis sativus]6.0e-7799.31Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIK VKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

TrEMBL top hitse value%identityAlignment
A0A0A0LET6 Uncharacterized protein2.9e-7799.31Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIK VKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

A0A1S3B6V7 putative deoxyribonuclease TATDN1 isoform X15.8e-78100Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

A0A1S3B6Y3 putative deoxyribonuclease TATDN1 isoform X25.8e-78100Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

A0A1S3B7M3 putative deoxyribonuclease TATDN1 isoform X35.8e-78100Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

A0A5D3DPS7 Putative deoxyribonuclease TATDN1 isoform X15.8e-78100Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

SwissProt top hitse value%identityAlignment
Q148G4 Putative deoxyribonuclease TATDN16.3e-2948.12Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        R   GVVHSF  + E    L+    LYIG NGCSLKT  NL+V++ IP E+LMIETD+P+C +KNTHAG K++K+ + +KKK ++     +K RNEPC +
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFP
         Q+LE+++  +   D  +L+ TLY+NT ++FFP
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFP

Q640V9 Putative deoxyribonuclease TATDN16.1e-3252.63Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        R   GVVHSF  + ED + +++  +LYIGINGCSLKT  NLDV++ IP ERLMIETD+P+C +KNTHAG K VK+ + +KKK +      +K RNEPC +
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFP
         QVLE++A  +    + +LS+TLY+NT ++FFP
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFP

Q6GML7 Putative deoxyribonuclease TATDN12.6e-3054.55Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        R   GVVHSF  S +D   LL   +LYIGINGCSLKTAENL+V++ IP +RLMIETD+P+C IKNTHAG K +K+ + +KKK +      VK RNEPC +
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFF
         QVLEV+A  +   D   L+ET+++NT  +FF
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFF

Q6P1N9 Putative deoxyribonuclease TATDN13.1e-2847.37Show/hide
Query:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV
        R   GVVHSF  + E    L+   +LYIG NGCSLKT  NL+V++ IP E+LMIETD+P+C +K+THAG K++++ + +KKK +      +K RNEPC +
Subjt:  RFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLV

Query:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFP
         Q+LE+++  +   D  +L+ TLY+NT +VFFP
Subjt:  RQVLEVLAGCKGIMDINQLSETLYHNTCRVFFP

Q9UUF1 Deoxyribonuclease Tat-D7.0e-2847.2Show/hide
Query:  GVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKS--VWASKKKEKHDEQCIVKGRNEPCLVRQ
        GVVHSFT S ++  + +    LY+G+NGCSLKT ENL+VVR IP+E++++ETD+P+CE++ +HAG +F+K+   + S KKE+  E C+++GRNEPC    
Subjt:  GVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKS--VWASKKKEKHDEQCIVKGRNEPCLVRQ

Query:  VLEVLAGCKGIMDINQLSETLYHNT
        V E++A  K I  + +LSE ++ N+
Subjt:  VLEVLAGCKGIMDINQLSETLYHNT

Arabidopsis top hitse value%identityAlignment
AT3G52390.1 TatD related DNase1.3e-6678.08Show/hide
Query:  HRFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCL
        +RF  GV HSFT SA DRDKLLSF  +Y+G+NGCSLKTAENL+V++GIP+ER+MIETDSPYC+IKNTHAGIKFVKS W SKKKEK+D++ +VKGRNEPCL
Subjt:  HRFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCL

Query:  VRQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        VRQVLEV+AG KG+ D+NQ+S TLYHNTCRVFFPQDLDSAADALL+
Subjt:  VRQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA

AT3G52390.2 TatD related DNase1.3e-6678.08Show/hide
Query:  HRFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCL
        +RF  GV HSFT SA DRDKLLSF  +Y+G+NGCSLKTAENL+V++GIP+ER+MIETDSPYC+IKNTHAGIKFVKS W SKKKEK+D++ +VKGRNEPCL
Subjt:  HRFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCL

Query:  VRQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA
        VRQVLEV+AG KG+ D+NQ+S TLYHNTCRVFFPQDLDSAADALL+
Subjt:  VRQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGGAACTTGCCAACCGTAGTTGCTTTCTTTTCTGATTGCACGGATGTTGATTATGCCATTGATGCTTGTCATAGGTTTTGTGCTGGAGTTGTTCATTCTTTCAC
AGATAGTGCAGAAGATCGTGATAAGCTTCTCTCATTCAGTAATTTGTACATAGGCATCAATGGTTGCTCTCTCAAAACTGCTGAAAATCTTGACGTTGTGAGGGGTATAC
CAATTGAGAGATTGATGATTGAGACGGACTCTCCATATTGTGAAATCAAGAATACACATGCTGGAATTAAGTTTGTTAAATCGGTCTGGGCTTCTAAGAAGAAAGAAAAG
CACGATGAGCAGTGCATAGTGAAGGGCCGGAATGAACCATGTTTAGTTCGGCAAGTTCTTGAGGTCTTGGCTGGCTGTAAAGGCATCATGGATATCAATCAGCTTAGTGA
AACTTTGTACCACAATACCTGCAGAGTTTTCTTTCCTCAAGACCTAGACTCTGCAGCAGATGCTCTCCTTGCTGTCCTTGGGAATGCTGCTGGAGAAGTTGGGGCCCGTT
CTGCAGCAATATTCAAACGCAGCGGCCGCCCTTCAACTTCCTGTAGGCATAAAGTAACTCCACTTCCTTACCACTCCATTCATGGACTCCAAAGCAGACTCTGCATCCTC
AGCAGTTTCAAAAGATACAAATCCAAAACCTCTACTTTTTCCGGATGCCCTATCATAGATGACCTTAGCACTCAATATCCCCGCTGCTTCTTATCTTTGGCCCCATTACT
TCCTTTTCACCTCCCCTTGGCACTTCAGGGAAATTCACCCGAACGGTTCGACCGCCGATTTGCTGACAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAGGAACTTGCCAACCGTAGTTGCTTTCTTTTCTGATTGCACGGATGTTGATTATGCCATTGATGCTTGTCATAGGTTTTGTGCTGGAGTTGTTCATTCTTTCAC
AGATAGTGCAGAAGATCGTGATAAGCTTCTCTCATTCAGTAATTTGTACATAGGCATCAATGGTTGCTCTCTCAAAACTGCTGAAAATCTTGACGTTGTGAGGGGTATAC
CAATTGAGAGATTGATGATTGAGACGGACTCTCCATATTGTGAAATCAAGAATACACATGCTGGAATTAAGTTTGTTAAATCGGTCTGGGCTTCTAAGAAGAAAGAAAAG
CACGATGAGCAGTGCATAGTGAAGGGCCGGAATGAACCATGTTTAGTTCGGCAAGTTCTTGAGGTCTTGGCTGGCTGTAAAGGCATCATGGATATCAATCAGCTTAGTGA
AACTTTGTACCACAATACCTGCAGAGTTTTCTTTCCTCAAGACCTAGACTCTGCAGCAGATGCTCTCCTTGCTGTCCTTGGGAATGCTGCTGGAGAAGTTGGGGCCCGTT
CTGCAGCAATATTCAAACGCAGCGGCCGCCCTTCAACTTCCTGTAGGCATAAAGTAACTCCACTTCCTTACCACTCCATTCATGGACTCCAAAGCAGACTCTGCATCCTC
AGCAGTTTCAAAAGATACAAATCCAAAACCTCTACTTTTTCCGGATGCCCTATCATAGATGACCTTAGCACTCAATATCCCCGCTGCTTCTTATCTTTGGCCCCATTACT
TCCTTTTCACCTCCCCTTGGCACTTCAGGGAAATTCACCCGAACGGTTCGACCGCCGATTTGCTGACAAGTAG
Protein sequenceShow/hide protein sequence
MMRNLPTVVAFFSDCTDVDYAIDACHRFCAGVVHSFTDSAEDRDKLLSFSNLYIGINGCSLKTAENLDVVRGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEK
HDEQCIVKGRNEPCLVRQVLEVLAGCKGIMDINQLSETLYHNTCRVFFPQDLDSAADALLAVLGNAAGEVGARSAAIFKRSGRPSTSCRHKVTPLPYHSIHGLQSRLCIL
SSFKRYKSKTSTFSGCPIIDDLSTQYPRCFLSLAPLLPFHLPLALQGNSPERFDRRFADK