CuGenDBv2

Gene ID	MELO3C031069
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Lipoxygenase
Genome location	chr05:777928..778596
RNA-Seq Expression	MELO3C031069
Synteny	MELO3C031069
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0006360 - transcription by RNA polymerase I (biological process) GO:0006633 - fatty acid biosynthetic process (biological process) GO:0031408 - oxylipin biosynthetic process (biological process) GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process) GO:0000439 - transcription factor TFIIH core complex (cellular component) GO:0005675 - transcription factor TFIIH holo complex (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005515 - protein binding (molecular function) GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR001024 - PLAT/LH2 domain IPR036392 - PLAT/LH2 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041371.1 lipoxygenase 2 [Cucumis melo var. makuwa]

2.6e-65

100

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP
        MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP

Query:  PISVTFSCKSWVQPKGLIAHRRIFFSSNK
        PISVTFSCKSWVQPKGLIAHRRIFFSSNK
Subjt:  PISVTFSCKSWVQPKGLIAHRRIFFSSNK

KAA0041373.1 lipoxygenase 2 [Cucumis melo var. makuwa]

2.0e-38

71.76

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE
        MSY   V VTVKPK K++FP  E+I L+FASV LDSN QPK FI C AQL+  +  V  K ++G I+VA  FGEIGAVIVEL E   NERFIDTISV AE
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE

Query:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
        EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
Subjt:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK

TYK21645.1 lipoxygenase 2 [Cucumis melo var. makuwa]

5.4e-39

72.52

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE
        MSYT  V VTVKPK K++FP  E+I L+FASV LDSN Q K FI C AQL+  +  V  K ++G I+VA  FGEIGAVIVEL E   NERFIDTISVEAE
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE

Query:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
        EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
Subjt:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK

XP_008449948.1 PREDICTED: putative lipoxygenase 5, partial [Cucumis melo]

2.0e-38

71.76

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE
        MSY   V VTVKPK K++FP  E+I L+FASV LDSN QPK FI C AQL+  +  V  K ++G I+VA  FGEIGAVIVEL E   NERFIDTISV AE
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE

Query:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
        EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
Subjt:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK

XP_016900735.1 PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis melo]

3.8e-69

100

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP
        MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP

Query:  PISVTFSCKSWVQPKGLIAHRRIFFSSNKVMVCFII
        PISVTFSCKSWVQPKGLIAHRRIFFSSNKVMVCFII
Subjt:  PISVTFSCKSWVQPKGLIAHRRIFFSSNKVMVCFII

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BP51 putative lipoxygenase 5

9.9e-39

71.76

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE
        MSY   V VTVKPK K++FP  E+I L+FASV LDSN QPK FI C AQL+  +  V  K ++G I+VA  FGEIGAVIVEL E   NERFIDTISV AE
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE

Query:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
        EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
Subjt:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK

A0A1S4DYE1 lipoxygenase 2, chloroplastic-like

1.8e-69

100

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP
        MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP

Query:  PISVTFSCKSWVQPKGLIAHRRIFFSSNKVMVCFII
        PISVTFSCKSWVQPKGLIAHRRIFFSSNKVMVCFII
Subjt:  PISVTFSCKSWVQPKGLIAHRRIFFSSNKVMVCFII

A0A5A7TDY8 Lipoxygenase

9.9e-39

71.76

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE
        MSY   V VTVKPK K++FP  E+I L+FASV LDSN QPK FI C AQL+  +  V  K ++G I+VA  FGEIGAVIVEL E   NERFIDTISV AE
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE

Query:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
        EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
Subjt:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK

A0A5A7TI85 Lipoxygenase

1.2e-65

100

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP
        MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEP

Query:  PISVTFSCKSWVQPKGLIAHRRIFFSSNK
        PISVTFSCKSWVQPKGLIAHRRIFFSSNK
Subjt:  PISVTFSCKSWVQPKGLIAHRRIFFSSNK

A0A5D3DDQ4 Lipoxygenase 2

2.6e-39

72.52

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Query:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE
        MSYT  V VTVKPK K++FP  E+I L+FASV LDSN Q K FI C AQL+  +  V  K ++G I+VA  FGEIGAVIVEL E   NERFIDTISVEAE
Subjt:  MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPK-FITCIAQLKSGNNKVS-KLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAE

Query:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
        EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK
Subjt:  EPPISVTFSCKSWVQPKGLIAHRRIFFSSNK

SwissProt top hits

e value

%identity

Alignment

P38418 Lipoxygenase 2, chloroplastic

4.0e-05

34.72

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Query:  FEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEPPISVTFSCKSWVQPKGLIAHRRIFFSSNKVM
        +E   E+  DFG +GA+ ++     +  R +    VE + P  S+TF+C+SWV PK +   +RIFFS    +
Subjt:  FEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEPPISVTFSCKSWVQPKGLIAHRRIFFSSNKVM

Arabidopsis top hits

e value

%identity

Alignment

AT3G45140.1 lipoxygenase 2

2.9e-06

34.72

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Query:  FEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEPPISVTFSCKSWVQPKGLIAHRRIFFSSNKVM
        +E   E+  DFG +GA+ ++     +  R +    VE + P  S+TF+C+SWV PK +   +RIFFS    +
Subjt:  FEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEPPISVTFSCKSWVQPKGLIAHRRIFFSSNKVM

Sequences

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CDS sequence

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ATGAGTTATACGTGTACTGTAGCTGTTACTGTGAAACCCAAAAGCAAAGATGACTTTCCTTCGAATGAAGTCATAAATCTCGAGTTTGCTAGCGTCAATTTGGATTCGAA
TGAACAGCCAAAGTTTATCACATGTATTGCTCAATTAAAAAGTGGTAATAATAAAGTGAGCAAGCTGTTCGAAGGTAGTATTGAGGTTGCTAGAGATTTTGGGGAGATTG
GAGCAGTGATTGTTGAATTGCATGAACGTACAAAGAATGAGAGGTTTATCGACACCATTTCTGTTGAGGCCGAAGAGCCTCCAATCTCGGTTACGTTTAGCTGCAAATCA
TGGGTGCAACCCAAGGGTCTTATTGCCCACCGAAGGATCTTCTTTTCTTCCAACAAGGTGATGGTTTGCTTCATCATTTAA

mRNA sequence

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TTGAAAAAGATTCCTCCATGAGTGTATAAATATGGTTAATGATATGTGTTGGTAATAAGGCAGTGAAAGAGTTTGGGTTTTGTGATATTCCAAATTTGTTATATCGTAAA
CTCCCCAAGGGCAGGAAAGGATGAGTTATACGTGTACTGTAGCTGTTACTGTGAAACCCAAAAGCAAAGATGACTTTCCTTCGAATGAAGTCATAAATCTCGAGTTTGCT
AGCGTCAATTTGGATTCGAATGAACAGCCAAAGTTTATCACATGTATTGCTCAATTAAAAAGTGGTAATAATAAAGTGAGCAAGCTGTTCGAAGGTAGTATTGAGGTTGC
TAGAGATTTTGGGGAGATTGGAGCAGTGATTGTTGAATTGCATGAACGTACAAAGAATGAGAGGTTTATCGACACCATTTCTGTTGAGGCCGAAGAGCCTCCAATCTCGG
TTACGTTTAGCTGCAAATCATGGGTGCAACCCAAGGGTCTTATTGCCCACCGAAGGATCTTCTTTTCTTCCAACAAGGTGATGGTTTGCTTCATCATTTAA

Protein sequence

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MSYTCTVAVTVKPKSKDDFPSNEVINLEFASVNLDSNEQPKFITCIAQLKSGNNKVSKLFEGSIEVARDFGEIGAVIVELHERTKNERFIDTISVEAEEPPISVTFSCKS
WVQPKGLIAHRRIFFSSNKVMVCFII

MELO3C031069 (gene) of Melon (DHL92) v4 genome