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MELO3C031071 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031071
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionSmall ubiquitin-related modifier
Genome locationchr05:2456043..2457360
RNA-Seq ExpressionMELO3C031071
SyntenyMELO3C031071
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061648.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa]2.1e-51100Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGGAI
        GGGGAI
Subjt:  GGGGAI

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]4.2e-3171.15Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MST+M+  + E  TRK E +P + YVN+KVNGQDGSEVYFRI K+++LSKLM  YCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGG
        GGGG
Subjt:  GGGG

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]5.5e-3168.87Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MST+M+  + E  TRK E +P S+YVN+KVNGQDGSEVYFRI K+++LS+LM +YCKRQ LE  TIAFL+DGH I G QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGGAI
        GGGG +
Subjt:  GGGGAI

XP_031743856.1 small ubiquitin-related modifier 1-like [Cucumis sativus]3.1e-4286.92Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MST MNNG DEETTRK +PKPESEYVNLKVNGQDGS+VYFRI KK+E++KLM SYC+RQELEFSTIAFL+DGHPIAGTQTAEELGLEDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGG-GAI
        GGG GAI
Subjt:  GGG-GAI

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]8.1e-3576.42Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MS +  N SDEET RK E KP+SEYVNLKVNGQDGSEVYFRI K+++L KLM SYCKRQ LE  TIAFL+DGH IAGTQTAEEL +EDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGGAI
        G  GAI
Subjt:  GGGGAI

TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 11.0e-51100Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGGAI
        GGGGAI
Subjt:  GGGGAI

A0A5N6QIF0 Small ubiquitin-related modifier2.1e-2051.46Show/hide
Query:  STSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        +T+   G      ++ E KP  +++NLKV GQDG+EV+FRI + ++L KLM +YC RQ +EF++IAFL DG  + G QT +EL +EDGDEIDAM H  GG
Subjt:  STSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Query:  GGG
        G G
Subjt:  GGG

A0A6J1D1W9 small ubiquitin-related modifier 1-like1.5e-2667.37Show/hide
Query:  EETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA
        EE+TRK E +P+ EYVN+KVNGQDGSEVYFR+ KK++L KLM SYC+RQ  +   +AFL+DGH I G QT E+L L+DGDEIDAM HH GGGGGA
Subjt:  EETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA

A0A6J1GLF8 Small ubiquitin-related modifier2.5e-2967.29Show/hide
Query:  MSTSMNNGSDEETTRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHY
        MST+M+  + E   RK E +P    YVN+KVNGQDGSEVYFRI K+++LSKLM +YCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGD+IDAMKHH 
Subjt:  MSTSMNNGSDEETTRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHY

Query:  GGGGGAI
        GGGGG +
Subjt:  GGGGGAI

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X22.0e-3171.15Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MST+M+  + E  TRK E +P + YVN+KVNGQDGSEVYFRI K+++LSKLM  YCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGG
        GGGG
Subjt:  GGGG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt31.0e-1648.86Show/hide
Query:  TRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        T + + KP +E++NLKV GQD +EV+F+I K +E SKLM  YC RQ    +++ FLVDG  I   QT  EL +EDGD+I+A+    GG
Subjt:  TRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

P55852 Small ubiquitin-related modifier 14.5e-2052.87Show/hide
Query:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG
        +P     ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++ ++IAFL DG  +   QT +EL +EDGDEIDAM H  GG GG
Subjt:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG

P55857 Small ubiquitin-related modifier 11.0e-1957.14Show/hide
Query:  YVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++ + IAFL DG  + G QT +EL +EDGDEIDAM H  GG
Subjt:  YVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Q6DI05 Small ubiquitin-related modifier 32.8e-1448.78Show/hide
Query:  KPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        K E++++NLKV GQDGS V F+I + + LSKLM +YC+RQ L    I F  DG PI  T T  +L +ED D ID  +   GG
Subjt:  KPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Q9FLP6 Small ubiquitin-related modifier 21.5e-2053.33Show/hide
Query:  TRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG
        T + + KP +  ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  TRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 13.2e-2152.87Show/hide
Query:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG
        +P     ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++ ++IAFL DG  +   QT +EL +EDGDEIDAM H  GG GG
Subjt:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG

AT5G55160.1 small ubiquitin-like modifier 21.1e-2153.33Show/hide
Query:  TRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG
        T + + KP +  ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  TRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG

AT5G55160.2 small ubiquitin-like modifier 26.7e-1946.6Show/hide
Query:  TRKNEPKP-ESEYVNLKVNGQ-------------DGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHY
        T + + KP +  ++NLKV GQ             DG+EV+FRI + ++L KLM +YC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  
Subjt:  TRKNEPKP-ESEYVNLKVNGQ-------------DGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHY

Query:  GGG
        GGG
Subjt:  GGG

AT5G55170.1 small ubiquitin-like modifier 33.2e-1342.27Show/hide
Query:  MNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        M+N  D+    K   + +  +V LKV  QDG EV F+  K + L KLMY YC R+ L+    AF+ +G  I G +T +EL +EDGD IDA +   GG
Subjt:  MNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

AT5G55856.1 Ubiquitin-like superfamily protein4.2e-1345.24Show/hide
Query:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        +P   S ++ +KV  QD   VYFRI +  EL K+M++Y  +  +E ST+ FL DG+ I   QT  ELGLED DEI+A     GG
Subjt:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACATCGATGAACAACGGCAGCGATGAAGAAACAACCCGAAAAAACGAACCAAAACCCGAGTCGGAGTACGTCAACCTCAAAGTGAATGGCCAGGATGGG
AGCGAAGTGTATTTCAGGATTTCTAAGAAATCCGAACTCAGCAAACTCATGTATTCTTACTGTAAAAGACAAGAGTTAGAGTTCAGTACCATTGCTTTTCTCGTG
GACGGCCATCCCATTGCTGGAACCCAAACCGCCGAAGAGCTGGGGTTGGAAGATGGAGATGAAATTGATGCCATGAAACACCACTACGGCGGCGGCGGCGGAGCA
ATCTGA
mRNA sequenceShow/hide mRNA sequence
TCCCAAAAAGAAAAAGTAGAAAAATACCATTTTGTTTTCTAAGTGTTTATAACTTTATACCAAACTAAAATGATGTGTTTCACTGATTAAACAATGTTTAAGAAA
CCCCTAATCCGTTGATTTAGTTCAAATATCTATGAGATAAACATTGTGAAAGATGTGTTCCTCCCCGTCCACCATATGCCATTTCTTTTTCATTTTTTTGCCTTC
ATCAATTCTCAATCATCCAATTCTCTTCAAAACCCATTGCAAAATCCCTCCCTTTTCACCTCCGAATTCCGTTTCAACAAGCTTCAGGCTAAATTTGTAAGTTCG
GTCGTCGTTTTCCACCTCAACTCCGACGTCTCTGCCACCGAGGACGCCGCATTCCGTTCCTGGATTTATCTCCTGTATTCAGAACGAGAGAAAGGTCTAAGAAAG
AAGCGAGTTTTTTGTTCAGAAGCTCACGCTGGTATTTGGGTCTTTTGTTTAGTATAAAGTTATAAACCCCGTCTAGAGTAGATGGAGATGAAGGAGACAAAACAA
GAGAGAGAAAAAGGAAGAGGAAGAAAGAGTAGAGGAAGGGAGGAACGTTAAAAGAAATATATTTTCATCTGTAGACCCAAAAAGCAAGTTGGAAACCCGAAAACC
CCCAGAAATGAACAAAGGAAAACAAGACTGGTGACGTACAGCCAACAGACGTTTCTACTCAGCCCAACGCTTGAAATGAAAGGAAAGAAAAAAACAGAATAGGCT
TTGTTCATACTCTCTCTTGAGTTCTGATTCAGAAATTTGAGCTTTAAAAAATGTCCACATCGATGAACAACGGCAGCGATGAAGAAACAACCCGAAAAAACGAAC
CAAAACCCGAGTCGGAGTACGTCAACCTCAAAGTGAATGGCCAGGATGGGAGCGAAGTGTATTTCAGGATTTCTAAGAAATCCGAACTCAGCAAACTCATGTATT
CTTACTGTAAAAGACAAGAGTTAGAGTTCAGTACCATTGCTTTTCTCGTGGACGGCCATCCCATTGCTGGAACCCAAACCGCCGAAGAGCTGGGGTTGGAAGATG
GAGATGAAATTGATGCCATGAAACACCACTACGGCGGCGGCGGCGGAGCAATCTGA
Protein sequenceShow/hide protein sequence
MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA
I