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MELO3C031132 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031132
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein ROOT HAIR DEFECTIVE 3
Genome locationchr05:9159332..9159449
RNA-Seq ExpressionMELO3C031132
SyntenyMELO3C031132
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR008803 - RHD3/Sey1
IPR030386 - GB1/RHD3-type guanine nucleotide-binding (G) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2294770.1 hypothetical protein Bca52824_041439 [Brassica carinata]1.4e-1189.74Show/hide
Query:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        MS S SQTTKGIW+ARCAGIEPCT+VMDLEGTDGRERGE
Subjt:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
KAG5537879.1 hypothetical protein RHGRI_025094 [Rhododendron griersonianum]4.7e-1289.74Show/hide
Query:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SLS+SQTTKGIW+A CAGIEPCTLVMDLEGTDGRERGE
Subjt:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
KAG5537880.1 hypothetical protein RHGRI_025094 [Rhododendron griersonianum]4.7e-1289.74Show/hide
Query:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SLS+SQTTKGIW+A CAGIEPCTLVMDLEGTDGRERGE
Subjt:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
KAG5537881.1 hypothetical protein RHGRI_025094 [Rhododendron griersonianum]4.7e-1289.74Show/hide
Query:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SLS+SQTTKGIW+A CAGIEPCTLVMDLEGTDGRERGE
Subjt:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
KAG5537883.1 hypothetical protein RHGRI_025094 [Rhododendron griersonianum]4.7e-1289.74Show/hide
Query:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SLS+SQTTKGIW+A CAGIEPCTLVMDLEGTDGRERGE
Subjt:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
TrEMBL top hitse value%identityAlignment
A0A218WX77 GB1/RHD3-type G domain-containing protein8.6e-1289.74Show/hide
Query:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +S  +SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Subjt:  MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
A0A6J1HJ25 Protein ROOT HAIR DEFECTIVE 3 homolog8.6e-1291.89Show/hide
Query:  LSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        + +SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Subjt:  LSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
A0A6J1HND9 Protein ROOT HAIR DEFECTIVE 3 homolog8.6e-1291.89Show/hide
Query:  LSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        + +SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Subjt:  LSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
A0A6J1KDB3 Protein ROOT HAIR DEFECTIVE 3 homolog8.6e-1291.89Show/hide
Query:  LSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        + +SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Subjt:  LSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
A0A6J1KMA1 Protein ROOT HAIR DEFECTIVE 3 homolog8.6e-1291.89Show/hide
Query:  LSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        + +SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Subjt:  LSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
SwissProt top hitse value%identityAlignment
P93042 Protein ROOT HAIR DEFECTIVE 31.5e-1391.43Show/hide
Query:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SQTTKGIW+ARCAGIEPCT+VMDLEGTDGRERGE
Subjt:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Q0JLS6 Protein ROOT HAIR DEFECTIVE 34.1e-1182.86Show/hide
Query:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SQTTKGIW+A+   IEPCTLVMDLEGTDGRERGE
Subjt:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Q2QMH2 Protein ROOT HAIR DEFECTIVE 3 homolog 15.7e-1385.71Show/hide
Query:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SQTTKGIW+ARC G+EPCT+VMDLEGTDGRERGE
Subjt:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Q9FKE9 Protein ROOT HAIR DEFECTIVE 3 homolog 21.8e-1182.86Show/hide
Query:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SQTTKGIW+ARC GIEP T+ MDLEGTDGRERGE
Subjt:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Q9SSN0 Protein ROOT HAIR DEFECTIVE 3 homolog 14.0e-1497.14Show/hide
Query:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Subjt:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Arabidopsis top hitse value%identityAlignment
AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3)2.8e-1597.14Show/hide
Query:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
Subjt:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
AT3G13870.1 Root hair defective 3 GTP-binding protein (RHD3)1.1e-1491.43Show/hide
Query:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SQTTKGIW+ARCAGIEPCT+VMDLEGTDGRERGE
Subjt:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
AT3G13870.2 Root hair defective 3 GTP-binding protein (RHD3)1.8e-1494.12Show/hide
Query:  SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        SQTTKGIW+ARCAGIEPCT+VMDLEGTDGRERGE
Subjt:  SQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3)1.3e-1282.86Show/hide
Query:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE
        +SQTTKGIW+ARC GIEP T+ MDLEGTDGRERGE
Subjt:  KSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTTTCTAAGTCGCAAACAACTAAAGGTATATGGTTGGCTAGATGCGCCGGCATCGAGCCTTGTACACTTGTGATGGATTTGGAAGGAACTGATGGAAGA
GAGCGAGGAGAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACTTTCTAAGTCGCAAACAACTAAAGGTATATGGTTGGCTAGATGCGCCGGCATCGAGCCTTGTACACTTGTGATGGATTTGGAAGGAACTGATGGAAGA
GAGCGAGGAGAGG
Protein sequenceShow/hide protein sequence
MSLSKSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGE