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MELO3C031201 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031201
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein LTV1-like protein
Genome locationchr05:14779059..14779211
RNA-Seq ExpressionMELO3C031201
SyntenyMELO3C031201
Gene Ontology termsGO:0000056 - ribosomal small subunit export from nucleus (biological process)
GO:0042274 - ribosomal small subunit biogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051321.1 protein LTV1-like protein [Cucumis melo var. makuwa]4.0e-15100Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
KAA0060375.1 protein LTV1-like protein [Cucumis melo var. makuwa]1.7e-1086.67Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        MIV KVNFDANENVYE   KIVGVRVQNVVD EIAALL+DDDLLR
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
TYK23893.1 protein LTV1-like protein [Cucumis melo var. makuwa]4.0e-15100Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
XP_008448616.1 PREDICTED: protein LTV1 homolog [Cucumis melo]1.5e-0977.78Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        M+V K+N DA+ENVY+ A KIVG+RVQNVVDPEIAALLDDDDL R
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
XP_011650323.1 protein LTV1 homolog [Cucumis sativus]2.5e-0980Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        MIV K+N DA+EN Y+ A KIVGVRVQNVVDPEIAALLDDDDL R
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
TrEMBL top hitse value%identityAlignment
A0A1S3BKZ8 protein LTV1 homolog7.1e-1077.78Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        M+V K+N DA+ENVY+ A KIVG+RVQNVVDPEIAALLDDDDL R
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
A0A5A7UCP4 Protein LTV1-like protein1.9e-15100Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
A0A5A7V3C9 Protein LTV1-like protein8.4e-1186.67Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        MIV KVNFDANENVYE   KIVGVRVQNVVD EIAALL+DDDLLR
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
A0A5D3CI19 Protein LTV1-like protein7.1e-1077.78Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        M+V K+N DA+ENVY+ A KIVG+RVQNVVDPEIAALLDDDDL R
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
A0A5D3DJU8 Protein LTV1-like protein1.9e-15100Show/hide
Query:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
        MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
Subjt:  MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G49990.1 unknown protein7.5e-0448.72Show/hide
Query:  VNFDANEN--VYETAPKIVGVRVQNVVDPEIAALLDDDD
        VN + N+N  +Y  A K V V+VQ  +DPE+AALL++ D
Subjt:  VNFDANEN--VYETAPKIVGVRVQNVVDPEIAALLDDDD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTTTTTAAAGTGAACTTTGATGCCAATGAGAACGTATACGAAACTGCACCCAAGATTGTTGGAGTCAGGGTTCAAAATGTTGTTGACCCCGAAATAGCT
GCCCTTCTTGATGACGATGATTTATTGCGA
mRNA sequenceShow/hide mRNA sequence
GCTTATGACGCCTCCAGAATGATTGTTTTTAAAGTGAACTTTGATGCCAATGAGAACGTATACGAAACTGCACCCAAGATTGTTGGAGTCAGGGTTCAAAATGTT
GTTGACCCCGAAATAGCTGCCCTTCTTGATGACGATGATTTATTGCGA
Protein sequenceShow/hide protein sequence
MIVFKVNFDANENVYETAPKIVGVRVQNVVDPEIAALLDDDDLLR