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MELO3C031277 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031277
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionZf-RVT domain-containing protein
Genome locationchr05:7579074..7585247
RNA-Seq ExpressionMELO3C031277
SyntenyMELO3C031277
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]8.8e-1142.7Show/hide
Query:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR
        +W  W    +I+ G  +W  D+   R         C    L   ++ K H R+ V +G R R+WL+PWLQGGAI EQVG++VLYDAASR
Subjt:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]2.6e-1041.57Show/hide
Query:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR
        +W  W    +I+ G  +W  D+   R         C+   L   ++ K+H R+ V +G R R+WL+PWLQ GAI EQVG++VLYDAASR
Subjt:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR

KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-1035.96Show/hide
Query:  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIF
        +R GT +  +  +K   L  +    +W  W    +++ G  +W  D+   R         C+   L   ++ K+H R+ V +G R R+WL+PWLQ GAI 
Subjt:  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIF

Query:  EQVGKQVLYDAASR
        EQVG++VLYDAASR
Subjt:  EQVGKQVLYDAASR

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]8.8e-1142.7Show/hide
Query:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR
        +W  W    +I+ G  +W  D+   R         C    L   ++ K H R+ V +G R R+WL+PWLQGGAI EQVG++VLYDAASR
Subjt:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR

XP_008452126.1 PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]3.3e-1035.09Show/hide
Query:  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIF
        +R GT +  +  +K   L  +    +W  W    +++ G  +W  D+   R         C+   L   ++ K+H R+ V +G R R+WL+PWLQ GAI 
Subjt:  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIF

Query:  EQVGKQVLYDAASR
        E+VG++VLYDAASR
Subjt:  EQVGKQVLYDAASR

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein4.2e-1142.7Show/hide
Query:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR
        +W  W    +I+ G  +W  D+   R         C    L   ++ K H R+ V +G R R+WL+PWLQGGAI EQVG++VLYDAASR
Subjt:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR

A0A5A7UP65 Reverse transcriptase5.5e-1135.96Show/hide
Query:  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIF
        +R GT +  +  +K   L  +    +W  W    +++ G  +W  D+   R         C+   L   ++ K+H R+ V +G R R+WL+PWLQ GAI 
Subjt:  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIF

Query:  EQVGKQVLYDAASR
        EQVG++VLYDAASR
Subjt:  EQVGKQVLYDAASR

A0A5A7UVV0 Uncharacterized protein1.2e-1041.57Show/hide
Query:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR
        +W  W    +I+ G  +W  D+   R         C+   L   ++ K+H R+ V +G R R+WL+PWLQ GAI EQVG++VLYDAASR
Subjt:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR

A0A5D3BDZ6 Zf-RVT domain-containing protein4.2e-1142.7Show/hide
Query:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR
        +W  W    +I+ G  +W  D+   R         C    L   ++ K H R+ V +G R R+WL+PWLQGGAI EQVG++VLYDAASR
Subjt:  IWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIFEQVGKQVLYDAASR

A0A5D3D7P6 Reverse transcriptase1.6e-1035.09Show/hide
Query:  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIF
        +R GT +  +  +K   L  +    +W  W    +++ G  +W  D+   R         C+   L   ++ K+H R+ V +G R R+WL+PWLQ GAI 
Subjt:  VRIGTIYS-SFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSDGRRFRMWLNPWLQGGAIF

Query:  EQVGKQVLYDAASR
        E+VG++VLYDAASR
Subjt:  EQVGKQVLYDAASR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATCTATCGTTGCACCGCTCTAATCACCGAAAGACAACCACCCACGCTGCGCGCCTTGAACCACGACGTTTTGAAGCGATTAGTTCGAATCGGCACAATCTATTC
GAGTTTCCTCATTAAGTTCGAACCACTGCCCAGCAGTTTAAAAGCTCAAATTTGGGCGTTTTGGTACAACTTGGTTTTTATTATACTTGGTTTTGAAATATGGTTAACTG
ATGCTTATGGTGAACGAGAAGGTGATTTCCCTAAGCTACGTGACTGTGTTTCCGTAGCGCTACTTATGTGTGATAGGCAAAAAGAACATGCCAGGCTAGATGTTAGTGAT
GGTAGAAGGTTTAGAATGTGGCTTAATCCGTGGTTGCAAGGAGGTGCGATCTTTGAGCAGGTTGGGAAACAGGTGCTATATGATGCAGCGAGTCGATGGGTGATAAGAAA
CCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCATCTATCGTTGCACCGCTCTAATCACCGAAAGACAACCACCCACGCTGCGCGCCTTGAACCACGACGTTTTGAAGCGATTAGTTCGAATCGGCACAATCTATTC
GAGTTTCCTCATTAAGTTCGAACCACTGCCCAGCAGTTTAAAAGCTCAAATTTGGGCGTTTTGGTACAACTTGGTTTTTATTATACTTGGTTTTGAAATATGGTTAACTG
ATGCTTATGGTGAACGAGAAGGTGATTTCCCTAAGCTACGTGACTGTGTTTCCGTAGCGCTACTTATGTGTGATAGGCAAAAAGAACATGCCAGGCTAGATGTTAGTGAT
GGTAGAAGGTTTAGAATGTGGCTTAATCCGTGGTTGCAAGGAGGTGCGATCTTTGAGCAGGTTGGGAAACAGGTGCTATATGATGCAGCGAGTCGATGGGTGATAAGAAA
CCCCTAG
Protein sequenceShow/hide protein sequence
MPIYRCTALITERQPPTLRALNHDVLKRLVRIGTIYSSFLIKFEPLPSSLKAQIWAFWYNLVFIILGFEIWLTDAYGEREGDFPKLRDCVSVALLMCDRQKEHARLDVSD
GRRFRMWLNPWLQGGAIFEQVGKQVLYDAASRWVIRNP