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MELO3C031377 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031377
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDNA-directed RNA polymerase I subunit RPA1-like
Genome locationchr08:24780247..24781326
RNA-Seq ExpressionMELO3C031377
SyntenyMELO3C031377
Gene Ontology termsGO:0032774 - RNA biosynthetic process (biological process)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038287.1 DNA-directed RNA polymerase I subunit RPA1-like [Cucumis melo var. makuwa]2.2e-1076.09Show/hide
Query:  SIKSKQQHNHINLQHLDILDYDETFKDYPWGRLSYILTYQFLKKVS
        S   K QHNHINL HLDIL+ +E FK YPWGRLSYILTYQFLKK S
Subjt:  SIKSKQQHNHINLQHLDILDYDETFKDYPWGRLSYILTYQFLKKVS
TrEMBL top hitse value%identityAlignment
A0A5A7T9I0 DNA-directed RNA polymerase I subunit RPA1-like1.1e-1076.09Show/hide
Query:  SIKSKQQHNHINLQHLDILDYDETFKDYPWGRLSYILTYQFLKKVS
        S   K QHNHINL HLDIL+ +E FK YPWGRLSYILTYQFLKK S
Subjt:  SIKSKQQHNHINLQHLDILDYDETFKDYPWGRLSYILTYQFLKKVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTAAGAAACAACAAGCATCATGTAATAAATCAATAAAGTCTAAACAACAACACAACCACATAAATCTCCAACATCTAGACATATTAGATTATGATGAA
ACCTTCAAAGACTATCCATGGGGAAGGTTATCCTACATCCTAACATATCAATTTTTGAAAAAAGTATCATAA
mRNA sequenceShow/hide mRNA sequence
TACAAATAGATGGTGAGTAAGAAACAACAAGCATCATGTAATAAATCAATAAAGTCTAAACAACAACACAACCACATAAATCTCCAACATCTAGACATATTAGAT
TATGATGAAACCTTCAAAGACTATCCATGGGGAAGGTTATCCTACATCCTAACATATCAATTTTTGAAAAAAGTATCATAAAGTAGTGACAAGGATGTTGTATAC
CTTCAAAGATTTTCCCTAGCTTTAGTCTATTGAGCTTTTAAGACAATACCAAGACATTTCAATTTAGATGTTGGATTTGGAAGAAAGCTTGCAATTGAAGGGCCA
GCAATTCAGACATGGGAATGTTTGGAAACAAGTGATTGGAGGACTCTAAACATCAACATTTTTTAA
Protein sequenceShow/hide protein sequence
MVSKKQQASCNKSIKSKQQHNHINLQHLDILDYDETFKDYPWGRLSYILTYQFLKKVS