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MELO3C031445 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031445
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPhotosynthetic NDH subunit of subcomplex B 3
Genome locationchr05:18461431..18463897
RNA-Seq ExpressionMELO3C031445
SyntenyMELO3C031445
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0009987 - cellular process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036119.1 photosynthetic NDH subunit of subcomplex B 3 [Cucumis melo var. makuwa]5.2e-4086.24Show/hide
Query:  MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQ
        M HTISSFQFLLLFSFSSH I FLLRTVA ATTTVVPHAH + A+TVVTL FLRSSLCL PPSV LFFDHVRAQ SPPPLHV ICLTGSNLVCLW DMLQ
Subjt:  MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQ

Query:  ERRLAVVRK
        ERRLAV+RK
Subjt:  ERRLAVVRK

KAA0040449.1 uncharacterized protein E6C27_scaffold35G00900 [Cucumis melo var. makuwa]2.7e-2883.13Show/hide
Query:  TVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLAVVRK
        +VA ATTTVVP AHP+ A+TVVTL FLRSSLCL PPSVVLFFDHVR Q SPP LHV ICLTGSNLVCLW DMLQERRLAV+RK
Subjt:  TVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLAVVRK

KAA0046512.1 plant UBX domain-containing protein 2 [Cucumis melo var. makuwa]5.6e-1063.08Show/hide
Query:  VAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLV
        VA  TTT+VP A P+ ATTVVT  FL+  LCL PPS VLFF+HV    SPPP HV I LT S+LV
Subjt:  VAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLV

KAA0048293.1 DNA repair protein UVH3 isoform X2 [Cucumis melo var. makuwa]6.2e-1762.96Show/hide
Query:  VAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLAVVR
        VA  TTT+VP A P+ ATTVVT  FL++ LCL PPS V  F+HV  Q SPPP HV + LT S+LV LWPD+LQ+R+LAVVR
Subjt:  VAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLAVVR

TYK27600.1 photosynthetic NDH subunit of subcomplex B 3 [Cucumis melo var. makuwa]5.2e-4086.24Show/hide
Query:  MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQ
        M HTISSFQFLLLFSFSSH I FLLRTVA ATTTVVPHAH + A+TVVTL FLRSSLCL PPSV LFFDHVRAQ SPPPLHV ICLTGSNLVCLW DMLQ
Subjt:  MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQ

Query:  ERRLAVVRK
        ERRLAV+RK
Subjt:  ERRLAVVRK

TrEMBL top hitse value%identityAlignment
A0A5A7T3Z2 Photosynthetic NDH subunit of subcomplex B 32.5e-4086.24Show/hide
Query:  MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQ
        M HTISSFQFLLLFSFSSH I FLLRTVA ATTTVVPHAH + A+TVVTL FLRSSLCL PPSV LFFDHVRAQ SPPPLHV ICLTGSNLVCLW DMLQ
Subjt:  MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQ

Query:  ERRLAVVRK
        ERRLAV+RK
Subjt:  ERRLAVVRK

A0A5A7TXE5 DNA repair protein UVH3 isoform X23.0e-1762.96Show/hide
Query:  VAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLAVVR
        VA  TTT+VP A P+ ATTVVT  FL++ LCL PPS V  F+HV  Q SPPP HV + LT S+LV LWPD+LQ+R+LAVVR
Subjt:  VAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLAVVR

A0A5D3DWD6 Photosynthetic NDH subunit of subcomplex B 32.5e-4086.24Show/hide
Query:  MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQ
        M HTISSFQFLLLFSFSSH I FLLRTVA ATTTVVPHAH + A+TVVTL FLRSSLCL PPSV LFFDHVRAQ SPPPLHV ICLTGSNLVCLW DMLQ
Subjt:  MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQ

Query:  ERRLAVVRK
        ERRLAV+RK
Subjt:  ERRLAVVRK

A0A5D3DYC4 Uncharacterized protein1.3e-2883.13Show/hide
Query:  TVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLAVVRK
        +VA ATTTVVP AHP+ A+TVVTL FLRSSLCL PPSVVLFFDHVR Q SPP LHV ICLTGSNLVCLW DMLQERRLAV+RK
Subjt:  TVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLAVVRK

A0A5D3DZ57 Plant UBX domain-containing protein 22.7e-1063.08Show/hide
Query:  VAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLV
        VA  TTT+VP A P+ ATTVVT  FL+  LCL PPS VLFF+HV    SPPP HV I LT S+LV
Subjt:  VAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCACACAATTTCTTCCTTCCAATTTCTTCTTCTCTTCTCATTTTCATCTCACACTATTCTTTTTCTTCTCCGAACAGTCGCCGTCGCCACCACCACAGTC
GTCCCTCATGCCCATCCCATGCTCGCCACCACTGTTGTCACTCTTCGCTTTCTTCGATCGTCTTTGTGCTTGCAACCACCGTCTGTAGTCCTTTTCTTCGACCAC
GTTCGTGCCCAGTCCTCGCCACCACCGTTGCACGTCCACATCTGTCTCACAGGCTCAAATCTGGTCTGCTTGTGGCCAGATATGTTGCAAGAGCGCCGATTAGCT
GTCGTCCGAAAGAAGAAGAAGCTTATTGTGGTTTGCTCCCTTATTGAACAAGACATTTCATTGAATTTGAAGCATTTATTAGAGCTCATCACAAGTTCTTTACTT
GTTATTGAATTGTACAGGCATATAATCGTTGTGGCATCGCTCAAGGAGGAGGAAGGAAACCATGGAATTGATGAAAAAGGAAGGGGAAATGCTCTGCTGCTATGT
GAAAAGAAATGGATGAACATCTTGTTGAGTAAAAAAGGCTTGTCTTTGGCTGGTGGTGCATCCTTATGTTTTACTAATTGTAATGTATCAAGTGGAAGATTGTGT
CTCACTCTAATTTTGGCGCGAGTTGGTGGTTCCTTTTCCCTGCTGGCCATGAATTTCAATTCAAAATTCCAGCTGAAATACATGAAAAAAGCAGAACGCTCGTTG
TTCTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCACACAATTTCTTCCTTCCAATTTCTTCTTCTCTTCTCATTTTCATCTCACACTATTCTTTTTCTTCTCCGAACAGTCGCCGTCGCCACCACCACAGTC
GTCCCTCATGCCCATCCCATGCTCGCCACCACTGTTGTCACTCTTCGCTTTCTTCGATCGTCTTTGTGCTTGCAACCACCGTCTGTAGTCCTTTTCTTCGACCAC
GTTCGTGCCCAGTCCTCGCCACCACCGTTGCACGTCCACATCTGTCTCACAGGCTCAAATCTGGTCTGCTTGTGGCCAGATATGTTGCAAGAGCGCCGATTAGCT
GTCGTCCGAAAGAAGAAGAAGCTTATTGTGGTTTGCTCCCTTATTGAACAAGACATTTCATTGAATTTGAAGCATTTATTAGAGCTCATCACAAGTTCTTTACTT
GTTATTGAATTGTACAGGCATATAATCGTTGTGGCATCGCTCAAGGAGGAGGAAGGAAACCATGGAATTGATGAAAAAGGAAGGGGAAATGCTCTGCTGCTATGT
GAAAAGAAATGGATGAACATCTTGTTGAGTAAAAAAGGCTTGTCTTTGGCTGGTGGTGCATCCTTATGTTTTACTAATTGTAATGTATCAAGTGGAAGATTGTGT
CTCACTCTAATTTTGGCGCGAGTTGGTGGTTCCTTTTCCCTGCTGGCCATGAATTTCAATTCAAAATTCCAGCTGAAATACATGAAAAAAGCAGAACGCTCGTTG
TTCTATCCTTGA
Protein sequenceShow/hide protein sequence
MIHTISSFQFLLLFSFSSHTILFLLRTVAVATTTVVPHAHPMLATTVVTLRFLRSSLCLQPPSVVLFFDHVRAQSSPPPLHVHICLTGSNLVCLWPDMLQERRLA
VVRKKKKLIVVCSLIEQDISLNLKHLLELITSSLLVIELYRHIIVVASLKEEEGNHGIDEKGRGNALLLCEKKWMNILLSKKGLSLAGGASLCFTNCNVSSGRLC
LTLILARVGGSFSLLAMNFNSKFQLKYMKKAERSLFYP