; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C031480 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031480
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr02:13264096..13264467
RNA-Seq ExpressionMELO3C031480
SyntenyMELO3C031480
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038320.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-63100Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQENR
        KAFLDVPDNMKYSYCNIILQENR
Subjt:  KAFLDVPDNMKYSYCNIILQENR

KAA0052025.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-4779.67Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSP EL+GTRT RV+EGRY+SSG K KRGGQAADSG+V RTAI+Y NEQLNRIAEWPVLQ QD +QT QEVVRQLE IP+LTLMDRC LM +LMRN+DD+
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQENR
        KAFL+VPDNMKY YC+IILQENR
Subjt:  KAFLDVPDNMKYSYCNIILQENR

KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-4882.93Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSPD+L+GTRT RV+E R +SSGSK KR G A DSGD+ RTAIEYRNEQLNRIAEWPVLQRQ+ASQT QEVVRQLE IP+L LMDRC LMHILM NVDDM
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQENR
        KAFLDVPDNMKYSY NIILQENR
Subjt:  KAFLDVPDNMKYSYCNIILQENR

KAA0067287.1 retrotransposon protein [Cucumis melo var. makuwa]7.5e-4882.79Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSPDEL+GTRTTRV+EGR++S+ S+ KRG QAA+S +V RTAIEY NEQLNRIAE PVLQRQDASQT QEVVRQLEVIP+LTLMDRC +M ILMRNVDDM
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQEN
        KAFLD+PDNMKYSYCNIILQEN
Subjt:  KAFLDVPDNMKYSYCNIILQEN

TYK10954.1 retrotransposon protein [Cucumis melo var. makuwa]5.7e-4882.11Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSPD+L+GTRT RV+E R +SSGSK KR G A DSGD+ RTAIEYRNEQLNRIAEWPVLQRQ+ASQT QEVVR+LE IP+L LMDRC LMHILM NVDDM
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQENR
        KAFLDVPDNMKYSY NIILQENR
Subjt:  KAFLDVPDNMKYSYCNIILQENR

TrEMBL top hitse value%identityAlignment
A0A5A7T4M9 Retrotransposon protein1.0e-63100Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQENR
        KAFLDVPDNMKYSYCNIILQENR
Subjt:  KAFLDVPDNMKYSYCNIILQENR

A0A5A7VBC5 Retrotransposon protein9.5e-4982.93Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSPD+L+GTRT RV+E R +SSGSK KR G A DSGD+ RTAIEYRNEQLNRIAEWPVLQRQ+ASQT QEVVRQLE IP+L LMDRC LMHILM NVDDM
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQENR
        KAFLDVPDNMKYSY NIILQENR
Subjt:  KAFLDVPDNMKYSYCNIILQENR

A0A5A7VJD7 Retrotransposon protein3.6e-4882.79Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSPDEL+GTRTTRV+EGR++S+ S+ KRG QAA+S +V RTAIEY NEQLNRIAE PVLQRQDASQT QEVVRQLEVIP+LTLMDRC +M ILMRNVDDM
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQEN
        KAFLD+PDNMKYSYCNIILQEN
Subjt:  KAFLDVPDNMKYSYCNIILQEN

A0A5D3BZD6 Retrotransposon protein6.2e-4879.67Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSP EL+GTRT RV+EGRY+SSG K KRGGQAADSG+V RTAI+Y NEQLNRIAEWPVLQ QD +QT QEVVRQLE IP+LTLMDRC LM +LMRN+DD+
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQENR
        KAFL+VPDNMKY YC+IILQENR
Subjt:  KAFLDVPDNMKYSYCNIILQENR

A0A5D3CIF5 Retrotransposon protein2.8e-4882.11Show/hide
Query:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM
        MSPD+L+GTRT RV+E R +SSGSK KR G A DSGD+ RTAIEYRNEQLNRIAEWPVLQRQ+ASQT QEVVR+LE IP+L LMDRC LMHILM NVDDM
Subjt:  MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDM

Query:  KAFLDVPDNMKYSYCNIILQENR
        KAFLDVPDNMKYSY NIILQENR
Subjt:  KAFLDVPDNMKYSYCNIILQENR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCTGATGAATTGATAGGAACAAGAACCACTCGGGTAAATGAAGGTAGGTATATTTCGAGCGGGTCTAAGTGGAAACGTGGAGGACAGGCTGCAGACAGT
GGAGATGTATTCCGCACTGCGATTGAGTACAGAAATGAACAACTGAACCGCATTGCTGAATGGCCTGTCCTACAACGTCAAGACGCAAGCCAAACACATCAAGAG
GTTGTCCGACAGTTGGAGGTCATCCCTAAGCTAACATTGATGGATAGGTGTTGCTTAATGCATATACTTATGCGTAATGTCGATGACATGAAAGCTTTCCTTGAC
GTTCCAGACAATATGAAGTACTCGTACTGCAACATCATTCTTCAAGAAAACCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCTGATGAATTGATAGGAACAAGAACCACTCGGGTAAATGAAGGTAGGTATATTTCGAGCGGGTCTAAGTGGAAACGTGGAGGACAGGCTGCAGACAGT
GGAGATGTATTCCGCACTGCGATTGAGTACAGAAATGAACAACTGAACCGCATTGCTGAATGGCCTGTCCTACAACGTCAAGACGCAAGCCAAACACATCAAGAG
GTTGTCCGACAGTTGGAGGTCATCCCTAAGCTAACATTGATGGATAGGTGTTGCTTAATGCATATACTTATGCGTAATGTCGATGACATGAAAGCTTTCCTTGAC
GTTCCAGACAATATGAAGTACTCGTACTGCAACATCATTCTTCAAGAAAACCGATGA
Protein sequenceShow/hide protein sequence
MSPDELIGTRTTRVNEGRYISSGSKWKRGGQAADSGDVFRTAIEYRNEQLNRIAEWPVLQRQDASQTHQEVVRQLEVIPKLTLMDRCCLMHILMRNVDDMKAFLD
VPDNMKYSYCNIILQENR