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MELO3C031490 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031490
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionABC transporter C family member 2-like
Genome locationchr05:22154657..22156027
RNA-Seq ExpressionMELO3C031490
SyntenyMELO3C031490
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003439 - ABC transporter-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038845.1 ABC transporter C family member 2 [Cucumis melo var. makuwa]4.3e-1590.2Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        VGIVGR GAGKSSILNALFRIVEL+  RIFIDG DIAKFGLWDLRKVVGII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

RRT52092.1 hypothetical protein B296_00034325 [Ensete ventricosum]1.8e-1380.39Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +GIVGR GAGKSS+LNALFRIVELE  +IFID +DI+KFGLWDLRKV+GII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

RWW15503.1 hypothetical protein GW17_00020653 [Ensete ventricosum]1.8e-1380.39Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +GIVGR GAGKSS+LNALFRIVELE  +IFID +DI+KFGLWDLRKV+GII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

TYK01413.1 ABC transporter C family member 2-like [Cucumis melo var. makuwa]4.3e-1581.36Show/hide
Query:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        + VF    VGIVGR GAGKSSILN+LFRIVELET RIFIDG DIAK GLWDLRKVVGII
Subjt:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

XP_008460280.1 PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like, partial [Cucumis melo]8.7e-1692.16Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        VGIVGR GAGKSSILNALFRIVEL+T RIFIDG DIAKFGLWDLRKVVGII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

TrEMBL top hitse value%identityAlignment
A0A1S3CC86 LOW QUALITY PROTEIN: ABC transporter C family member 2-like4.2e-1692.16Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        VGIVGR GAGKSSILNALFRIVEL+T RIFIDG DIAKFGLWDLRKVVGII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

A0A426YK30 ABC transmembrane type-1 domain-containing protein8.7e-1480.39Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +GIVGR GAGKSS+LNALFRIVELE  +IFID +DI+KFGLWDLRKV+GII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

A0A5A7TBT5 ABC transporter C family member 22.1e-1590.2Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        VGIVGR GAGKSSILNALFRIVEL+  RIFIDG DIAKFGLWDLRKVVGII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

A0A5D3BNY4 ABC transporter C family member 2-like2.1e-1581.36Show/hide
Query:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        + VF    VGIVGR GAGKSSILN+LFRIVELET RIFIDG DIAK GLWDLRKVVGII
Subjt:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

M0TVS7 Uncharacterized protein8.7e-1480.39Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +GIVGR GAGKSS+LNALFRIVELE  +IFID +DI+KFGLWDLRKV+GII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

SwissProt top hitse value%identityAlignment
Q42093 ABC transporter C family member 22.5e-1367.8Show/hide
Query:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +F+     VGIVGR GAGKSS+LNALFRIVE+E  RI ID  D+ KFGL DLRKV+GII
Subjt:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

Q54LE6 ABC transporter C family member 55.6e-1062.96Show/hide
Query:  GILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        G  +GI GR G+GKSS+L ALFRIVEL + RI IDG DI+K GL DLR  + II
Subjt:  GILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

Q9C8G9 ABC transporter C family member 11.1e-1378.43Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        VGIVGR GAGKSS+LNALFRIVELE  RI ID  DI +FGL DLRKV+GII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

Q9C8H0 ABC transporter C family member 122.7e-1264.41Show/hide
Query:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +FV     VG+VGR GAGKSS+LNALFRIVE+E  RI ID  D+AKFGL D+R+V+ II
Subjt:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

Q9C8H1 ABC transporter C family member 118.4e-1466.1Show/hide
Query:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +FV+    VG+VGR GAGKSS+LNAL+RIVELE  RI ID +D+AKFGL DLR+V+ II
Subjt:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

Arabidopsis top hitse value%identityAlignment
AT1G30400.1 multidrug resistance-associated protein 17.8e-1578.43Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        VGIVGR GAGKSS+LNALFRIVELE  RI ID  DI +FGL DLRKV+GII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

AT1G30400.2 multidrug resistance-associated protein 17.8e-1578.43Show/hide
Query:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        VGIVGR GAGKSS+LNALFRIVELE  RI ID  DI +FGL DLRKV+GII
Subjt:  VGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

AT1G30420.1 multidrug resistance-associated protein 126.0e-1566.1Show/hide
Query:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +FV+    VG+VGR GAGKSS+LNAL+RIVELE  RI ID +D+AKFGL DLR+V+ II
Subjt:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

AT2G34660.1 multidrug resistance-associated protein 21.7e-1467.8Show/hide
Query:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +F+     VGIVGR GAGKSS+LNALFRIVE+E  RI ID  D+ KFGL DLRKV+GII
Subjt:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII

AT2G34660.2 multidrug resistance-associated protein 21.7e-1467.8Show/hide
Query:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII
        +F+     VGIVGR GAGKSS+LNALFRIVE+E  RI ID  D+ KFGL DLRKV+GII
Subjt:  YFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTAAATTGGATATTAAAATAGCAGTATCTAGGGTTCCTATTTATTTTGTGTTCATCGGCATTTTGGTTGGAATAGTCGGACGGATTGGGGCTGGAAAATCAAG
CATACTTAATGCTTTATTTCGTATTGTTGAACTAGAAACAGAAAGAATATTCATTGATGGTTTTGATATTGCAAAATTTGGATTGTGGGATTTGAGAAAAGTTGTTGGGA
TTATAGCAGTCACTTTTTCTTTTTTCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTAAATTGGATATTAAAATAGCAGTATCTAGGGTTCCTATTTATTTTGTGTTCATCGGCATTTTGGTTGGAATAGTCGGACGGATTGGGGCTGGAAAATCAAG
CATACTTAATGCTTTATTTCGTATTGTTGAACTAGAAACAGAAAGAATATTCATTGATGGTTTTGATATTGCAAAATTTGGATTGTGGGATTTGAGAAAAGTTGTTGGGA
TTATAGCAGTCACTTTTTCTTTTTTCAGGTAAAGGGTAGGAAGTGTTAGGTTTAATCTAGATCCATTCCAAGAACACACGGACGTTGATCTTTGGGAAGTTCGTGAGAGG
GAACTCTTAAAGGATTTCATAAGAACGAATACGTTGGGCTTGGATGCTGAGAAGATTGCCTTAGACTTTGGTTTGTATTGTAACATGTGA
Protein sequenceShow/hide protein sequence
MLPKLDIKIAVSRVPIYFVFIGILVGIVGRIGAGKSSILNALFRIVELETERIFIDGFDIAKFGLWDLRKVVGIIAVTFSFFR