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MELO3C031492 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031492
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr05:12038540..12040392
RNA-Seq ExpressionMELO3C031492
SyntenyMELO3C031492
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032327.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]7.7e-2870.75Show/hide
Query:  LFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT--------------------------KCHVAINERISMAITHGAEKPISLHAVR
        LF   T IMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT                          +CHVAINERISMAITHGAEKPISLHAVR
Subjt:  LFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT--------------------------KCHVAINERISMAITHGAEKPISLHAVR

Query:  FNQAIG
        FNQAIG
Subjt:  FNQAIG

KAA0033533.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.7e-2562.5Show/hide
Query:  MCSYLLIECLFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT---------------KCH---------VAINERISMAITHGAEKP
        MCSYLLIECLFSMSTAIMSSSYPR NFM+TDA+FLEFEDDL NI GG SSV D+T               + H         VAIN RI M I  G EKP
Subjt:  MCSYLLIECLFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT---------------KCH---------VAINERISMAITHGAEKP

Query:  ISLHAVRFNQAIGVCVRRHF
        IS HAVRF+QAIG CVR+ F
Subjt:  ISLHAVRFNQAIGVCVRRHF

KAA0047829.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.5e-2375.29Show/hide
Query:  SMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHF
        S +  IMSSSYPR NFME DA+F+EFEDDL NIAGGSSSV DNTK HVAIN  ISM I  GAEK IS HAVRFNQ IGVCVR+ F
Subjt:  SMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHF

KAA0062838.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.0e-2479.75Show/hide
Query:  MSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHF
        MSSSYPRNNFMETDA+FLEFEDDL NIA  SSSV DN + HVAIN RISM I+ GAEKPIS HAVRFNQ IGVCVR+ F
Subjt:  MSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHF

TYJ99419.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]7.7e-2870.75Show/hide
Query:  LFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT--------------------------KCHVAINERISMAITHGAEKPISLHAVR
        LF   T IMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT                          +CHVAINERISMAITHGAEKPISLHAVR
Subjt:  LFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT--------------------------KCHVAINERISMAITHGAEKPISLHAVR

Query:  FNQAIG
        FNQAIG
Subjt:  FNQAIG

TrEMBL top hitse value%identityAlignment
A0A5A7SSE5 CACTA en-spm transposon protein3.7e-2870.75Show/hide
Query:  LFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT--------------------------KCHVAINERISMAITHGAEKPISLHAVR
        LF   T IMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT                          +CHVAINERISMAITHGAEKPISLHAVR
Subjt:  LFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT--------------------------KCHVAINERISMAITHGAEKPISLHAVR

Query:  FNQAIG
        FNQAIG
Subjt:  FNQAIG

A0A5A7SSV3 CACTA en-spm transposon protein1.3e-2562.5Show/hide
Query:  MCSYLLIECLFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT---------------KCH---------VAINERISMAITHGAEKP
        MCSYLLIECLFSMSTAIMSSSYPR NFM+TDA+FLEFEDDL NI GG SSV D+T               + H         VAIN RI M I  G EKP
Subjt:  MCSYLLIECLFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT---------------KCH---------VAINERISMAITHGAEKP

Query:  ISLHAVRFNQAIGVCVRRHF
        IS HAVRF+QAIG CVR+ F
Subjt:  ISLHAVRFNQAIGVCVRRHF

A0A5A7U311 CACTA en-spm transposon protein7.2e-2475.29Show/hide
Query:  SMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHF
        S +  IMSSSYPR NFME DA+F+EFEDDL NIAGGSSSV DNTK HVAIN  ISM I  GAEK IS HAVRFNQ IGVCVR+ F
Subjt:  SMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHF

A0A5A7V5D8 CACTA en-spm transposon protein1.5e-2479.75Show/hide
Query:  MSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHF
        MSSSYPRNNFMETDA+FLEFEDDL NIA  SSSV DN + HVAIN RISM I+ GAEKPIS HAVRFNQ IGVCVR+ F
Subjt:  MSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHF

A0A5D3BKF1 CACTA en-spm transposon protein3.7e-2870.75Show/hide
Query:  LFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT--------------------------KCHVAINERISMAITHGAEKPISLHAVR
        LF   T IMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT                          +CHVAINERISMAITHGAEKPISLHAVR
Subjt:  LFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNT--------------------------KCHVAINERISMAITHGAEKPISLHAVR

Query:  FNQAIG
        FNQAIG
Subjt:  FNQAIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTCGTATTTGCTTATTGAATGTTTGTTTTCTATGTCCACAGCCATTATGTCATCGTCATATCCACGTAATAATTTTATGGAGACAGACGCTATATTCCTC
GAGTTTGAAGACGATTTATATAACATCGCGGGAGGGTCGTCGTCCGTGGACGACAATACGAAGTGCCACGTTGCAATAAATGAGCGCATTTCGATGGCGATCACC
CATGGAGCGGAGAAGCCTATTTCCCTACACGCTGTTCGCTTCAACCAGGCGATAGGCGTGTGCGTGCGAAGACATTTTTCGTCTACTGCCTTAAGTGGGCGACGT
TGGGAGAGAATACATTGA
mRNA sequenceShow/hide mRNA sequence
TACCCACATATTTATGTAGTTTATATATTTTGATTCTAGCTATGTGTTCGTATTTGCTTATTGAATGTTTGTTTTCTATGTCCACAGCCATTATGTCATCGTCAT
ATCCACGTAATAATTTTATGGAGACAGACGCTATATTCCTCGAGTTTGAAGACGATTTATATAACATCGCGGGAGGGTCGTCGTCCGTGGACGACAATACGAAGT
GCCACGTTGCAATAAATGAGCGCATTTCGATGGCGATCACCCATGGAGCGGAGAAGCCTATTTCCCTACACGCTGTTCGCTTCAACCAGGCGATAGGCGTGTGCG
TGCGAAGACATTTTTCGTCTACTGCCTTAAGTGGGCGACGTTGGGAGAGAATACATTGAGGTCGTTAAGGGCGACCTCCAGGTTTGTTGAGCATCAGATGCTCAC
GACCTTTAAAGAGTTCCGGATCGACTGTCACAGACATTTCAAAAAGTACAGCGACCCGGAGGAGGAGCAATCACGAACGAACAAGGCTACTAGACAGAAACAGCC
TTACAATCATAGTAGCGGATCCAAGTCGTTTTTACAACGATAGTACGAGCTCATTGAGAGAAAAGAGTTGTTCTGAGAAACACACGTTCGAGCTGGAACGTTCGT
GTTGCAGGCCGCAAAAGATGCGCATAATTAAATGCTAGAACTCCAATCCCAGCCTACCCTAGAGGGTAGTCAGCCACTCTCTGAGAATGAGATATGCGATCAGGT
GTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGAGACCCAAGCCGAAGGCCCGCAGGACGACGAGTGTGAGTAGTTCGTCGACATCTTGTTCGCAGTC
CATACAAAAAAAGATTGAATTACAAGCTAAACTTAATGAAGCTTTGGAACGGATTGAAGTGCAAGATAGAAATCACCAAGCGTTAGCTTCACAAGTGGAACAAAT
GCAAAGCTGATAGAAGACTTCACTTGTGCACAGAAGGGACCACCACATGATCCTTTGCTTTGCGGTACGTATATATGTCTCCATTATTCTTAAGTTTTTGCAATG
ATAGTATACAGTGAACATATGGATATATGTACTAAACTTAGTTACTTTTATATCATTTTAAGATCGAAGATGTAGAATGACGCGTACGCGCCTCGTTGGAAGATT
TTGTTATGTTTGCGTTTTTCTGTATTATGAGAACTACATTTTTTGTATTAA
Protein sequenceShow/hide protein sequence
MCSYLLIECLFSMSTAIMSSSYPRNNFMETDAIFLEFEDDLYNIAGGSSSVDDNTKCHVAINERISMAITHGAEKPISLHAVRFNQAIGVCVRRHFSSTALSGRR
WERIH