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MELO3C031507 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031507
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr05:23242223..23245701
RNA-Seq ExpressionMELO3C031507
SyntenyMELO3C031507
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040037.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.1e-0745Show/hide
Query:  WNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNIS
        W+ +S L F YPRL+ALS  KD S R+ WN+ + DWD+ PRR L + E   W  +K++++
Subjt:  WNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNIS

KAA0047998.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.2e-0850Show/hide
Query:  SLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNI
        SL    PRLYALS+ K+ + +E W+  INDW+ KPRRPLN++E+N W ++K+++
Subjt:  SLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNI

KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.1e-0737.5Show/hide
Query:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK
        +W+ +  L   +PRLYALSN++  + +E W+   +DW+++PRRPLN++E   W  IK ++  +  ++ G CK
Subjt:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK

KAA0057616.1 putative isomerase BH0283-like protein [Cucumis melo var. makuwa]1.1e-0750Show/hide
Query:  SSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNI
        S SL    PRLYALS+ K+   +E W+  INDW+ KPRRPLN++E+N W ++K+++
Subjt:  SSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNI

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.1e-0738.89Show/hide
Query:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK
        +W+ +  L    PRLYALSN++  + +E W+   +DW++KPRRPLN++E   W  IK ++  +  ++ G CK
Subjt:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK

TrEMBL top hitse value%identityAlignment
A0A5A7TYF4 LINE-1 retrotransposable element ORF2 protein4.0e-0850Show/hide
Query:  SLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNI
        SL    PRLYALS+ K+ + +E W+  INDW+ KPRRPLN++E+N W ++K+++
Subjt:  SLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNI

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein4.4e-0738.89Show/hide
Query:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK
        +W+ +  L    PRLYALSN++  + +E W+   +DW++KPRRPLN++E   W  IK ++  +  ++ G CK
Subjt:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK

A0A5A7UTI6 LINE-1 retrotransposable element ORF2 protein4.4e-0737.5Show/hide
Query:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK
        +W+ +  L   +PRLYALSN++  + +E W+   +DW+++PRRPLN++E   W  IK ++  +  ++ G CK
Subjt:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK

A0A5A7UU00 Putative isomerase BH0283-like protein5.2e-0850Show/hide
Query:  SSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNI
        S SL    PRLYALS+ K+   +E W+  INDW+ KPRRPLN++E+N W ++K+++
Subjt:  SSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNI

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein4.4e-0738.89Show/hide
Query:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK
        +W+ +  L    PRLYALSN++  + +E W+   +DW++KPRRPLN++E   W  IK ++  +  ++ G CK
Subjt:  RWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGGATGAGTATATGGAAGAAGAAGACAAGAGATGGAATGGCTCTTCCTCTCTTAGATTCAGCTATCCAAGGTTATATGCTTTATCCAACATCAAAGAT
GACTCAAACAGGGAGGCTTGGAATGATAACATTAATGATTGGGATATTAAACCCAGAAGACCTCTAAATGATAAGGAAACTAATCAATGGATGATGATCAAATCC
AACATTTCTTATCAAAGAGGGAGTTCTTTGGGGTTTTGTAAAGCTTTCAAGGCCTTATGTGAACCCAAGATTGTCGTGATTCTTTTTGTCCACAAGGTA
mRNA sequenceShow/hide mRNA sequence
AAGAAATACAAGAGATAAAGAGCTAGAGATAAACCTTGAATTAGTTAAAGGGTGACAAAAAGCTTATGTAACTTGATTGCTATATTATAAGAAGGGTTGTAGTCT
TTAATGGTGGTGTTTTATGAGAACCATATTCCATAAAGTCCACAAAAGTTGCAACAGCCACGTTAAATCGTATATGATTCCCTTTGCATTGGAGTAATTGTTTTG
GCATATTTTGGAACAAAGTTCGTGTTACATTCCTGCTGTGTCATTTTATCCACCCGTCTGTATTGTAATGTTTCTCCATATTTTCTTCATGAAGACACAATGGAT
GAGGATGAGTATATGGAAGAAGAAGACAAGAGATGGAATGGCTCTTCCTCTCTTAGATTCAGCTATCCAAGGTTATATGCTTTATCCAACATCAAAGATGACTCA
AACAGGGAGGCTTGGAATGATAACATTAATGATTGGGATATTAAACCCAGAAGACCTCTAAATGATAAGGAAACTAATCAATGGATGATGATCAAATCCAACATT
TCTTATCAAAGAGGGAGTTCTTTGGGGTTTTGTAAAGCTTTCAAGGCCTTATGTGAACCCAAGATTGTCGTGATTCTTTTTGTCCACAAGGTAA
Protein sequenceShow/hide protein sequence
MDEDEYMEEEDKRWNGSSSLRFSYPRLYALSNIKDDSNREAWNDNINDWDIKPRRPLNDKETNQWMMIKSNISYQRGSSLGFCKAFKALCEPKIVVILFVHKV