CuGenDBv2

Gene ID	MELO3C031732
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	KH domain-containing protein
Genome location	chr06:23837477..23837816
RNA-Seq Expression	MELO3C031732
Synteny	MELO3C031732
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0060810.1 KH domain-containing protein [Cucumis melo var. makuwa]

3.4e-39

76.58

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLII
        I GDLDV KEAL+H+VTRL A LFD+EGALS +LPI+ Y PLSADGS+SLSYDGR+ KRHGRG SYSS YGGFNDLA  DGYGSY  ++VHILTLTCLII
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLII

Query:  AMGTMVPFAFR
        AMGT+VP  FR
Subjt:  AMGTMVPFAFR

KAA0062429.1 KH domain-containing protein [Cucumis melo var. makuwa]

1.6e-33

69.72

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Query:  DLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLIIAMG
        DLDV KEA +H+VTRL ANLF +EG+LS +LPI+PYLPL  D S+SLSY+GRE KRHGRG+ YSS YGGFNDLA  DGY SYS ++VHI TLTCLII +G
Subjt:  DLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLIIAMG

Query:  TMVPFAFRG
         +V  AFRG
Subjt:  TMVPFAFRG

TYK08822.1 KH domain-containing protein [Cucumis melo var. makuwa]

5.2e-40

76.79

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLII
        I GDLDV KEAL+H+VTRL A LFD+EGALS +LPI+ Y PLSADGS+SLSYDGR+ KRHGRG SYSS YGGFNDLA  DGYGSY  ++VHILTLTCLII
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLII

Query:  AMGTMVPFAFRG
        AMGT+VP  FRG
Subjt:  AMGTMVPFAFRG

XP_008459329.1 PREDICTED: KH domain-containing protein At4g18375 isoform X1 [Cucumis melo]

2.1e-33

81.11

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRV
        I GDLDV KEALIH+VTRL ANLFD+EGALSA+LP++PYLPLSADGS+SLSYDGRE KRHGRGHSYSS YGGFNDLA  DGYGSYS +++
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRV

XP_008459330.1 PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Cucumis melo]

2.1e-33

81.11

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRV
        I GDLDV KEALIH+VTRL ANLFD+EGALSA+LP++PYLPLSADGS+SLSYDGRE KRHGRGHSYSS YGGFNDLA  DGYGSYS +++
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C9E7 KH domain-containing protein At4g18375 isoform X1

1.0e-33

81.11

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRV
        I GDLDV KEALIH+VTRL ANLFD+EGALSA+LP++PYLPLSADGS+SLSYDGRE KRHGRGHSYSS YGGFNDLA  DGYGSYS +++
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRV

A0A1S3CA00 KH domain-containing protein At4g18375 isoform X2

1.0e-33

81.11

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRV
        I GDLDV KEALIH+VTRL ANLFD+EGALSA+LP++PYLPLSADGS+SLSYDGRE KRHGRGHSYSS YGGFNDLA  DGYGSYS +++
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRV

A0A5A7V0G1 KH domain-containing protein

1.6e-39

76.58

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLII
        I GDLDV KEAL+H+VTRL A LFD+EGALS +LPI+ Y PLSADGS+SLSYDGR+ KRHGRG SYSS YGGFNDLA  DGYGSY  ++VHILTLTCLII
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLII

Query:  AMGTMVPFAFR
        AMGT+VP  FR
Subjt:  AMGTMVPFAFR

A0A5A7V9Q7 KH domain-containing protein

7.9e-34

69.72

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Query:  DLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLIIAMG
        DLDV KEA +H+VTRL ANLF +EG+LS +LPI+PYLPL  D S+SLSY+GRE KRHGRG+ YSS YGGFNDLA  DGY SYS ++VHI TLTCLII +G
Subjt:  DLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLIIAMG

Query:  TMVPFAFRG
         +V  AFRG
Subjt:  TMVPFAFRG

A0A5D3CC00 KH domain-containing protein

2.5e-40

76.79

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLII
        I GDLDV KEAL+H+VTRL A LFD+EGALS +LPI+ Y PLSADGS+SLSYDGR+ KRHGRG SYSS YGGFNDLA  DGYGSY  ++VHILTLTCLII
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLII

Query:  AMGTMVPFAFRG
        AMGT+VP  FRG
Subjt:  AMGTMVPFAFRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G15270.1 RNA-binding KH domain-containing protein

5.6e-16

45.88

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSY
        I G+LDV KEALI + +RL AN+FD+EGA+SA++P++PY+P++ D  +   YD R+ +R  RG+ Y   YG      S +GY  Y
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSY

AT5G15270.2 RNA-binding KH domain-containing protein

5.6e-16

45.88

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Query:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSY
        I G+LDV KEALI + +RL AN+FD+EGA+SA++P++PY+P++ D  +   YD R+ +R  RG+ Y   YG      S +GY  Y
Subjt:  IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSY

Sequences

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CDS sequence

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ATATATGGGGATCTTGATGTTACCAAGGAGGCTCTTATACATGTAGTGACCAGGCTTATAGCCAATCTTTTTGATAAAGAAGGGGCTCTCTCAGCTATTCTGCCT
ATTATGCCGTATCTTCCTCTATCAGCTGATGGTTCAAATAGTCTAAGCTACGATGGTAGAGAAGATAAAAGACATGGGCGTGGACATTCATATTCAAGTAGTTAT
GGGGGTTTCAATGATTTGGCTAGTGATGATGGTTATGGAAGCTACAGTGACACACGAGTACATATATTAACCTTGACATGTCTGATTATAGCAATGGGGACTATG
GTTCCATTTGCTTTTAGAGGTTAA

mRNA sequence

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GATATATGGGGATCTTGATGTTACCAAGGAGGCTCTTATACATGTAGTGACCAGGCTTATAGCCAATCTTTTTGATAAAGAAGGGGCTCTCTCAGCTATTCTGCC
TATTATGCCGTATCTTCCTCTATCAGCTGATGGTTCAAATAGTCTAAGCTACGATGGTAGAGAAGATAAAAGACATGGGCGTGGACATTCATATTCAAGTAGTTA
TGGGGGTTTCAATGATTTGGCTAGTGATGATGGTTATGGAAGCTACAGTGACACACGAGTACATATATTAACCTTGACATGTCTGATTATAGCAATGGGGACTAT
GGTTCCATTTGCTTTTAGAGGTTAA

Protein sequence

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IYGDLDVTKEALIHVVTRLIANLFDKEGALSAILPIMPYLPLSADGSNSLSYDGREDKRHGRGHSYSSSYGGFNDLASDDGYGSYSDTRVHILTLTCLIIAMGTM
VPFAFRG

MELO3C031732 (gene) of Melon (DHL92) v4 genome