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MELO3C031805 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031805
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionprotein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Genome locationchr06:6888455..6892405
RNA-Seq ExpressionMELO3C031805
SyntenyMELO3C031805
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
InterPro domainsIPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4
IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140790.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucumis sativus]1.0e-1989.66Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
        MLPKGTRSVLVQPVVQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANK++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
XP_016899091.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis melo]1.9e-2196.55Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
        MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANK++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
XP_023542853.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo]5.2e-1986.44Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYNS
        MLPKGTRSVLVQPV QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA K+++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYNS
XP_031738698.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis sativus]1.0e-1989.66Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
        MLPKGTRSVLVQPVVQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANK++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
XP_038884000.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Benincasa hispida]1.4e-1989.66Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
        MLP+GTRSVLVQPVVQNLKQ+G+EMEKMGGFILLASSLSYAF DKDRAWIRALANK++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
TrEMBL top hitse value%identityAlignment
A0A0A0LBA9 Uncharacterized protein5.1e-2089.66Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
        MLPKGTRSVLVQPVVQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANK++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X19.2e-2296.55Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
        MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANK++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
A0A5A7SUJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB29.2e-2296.55Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
        MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANK++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYN
A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic2.5e-1986.44Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYNS
        MLPKGTRSVLVQPV QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA K+++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYNS
A0A6J1HXW3 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X12.1e-1884.75Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYNS
        ML KGTRSVLVQPV QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA K+++
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYNS
SwissProt top hitse value%identityAlignment
Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic7.1e-1157.89Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKY
        +LP GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A K+
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKY
Arabidopsis top hitse value%identityAlignment
AT5G52110.1 Protein of unknown function (DUF2930)5.0e-1257.89Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKY
        +LP GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A K+
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKY
AT5G52110.2 Protein of unknown function (DUF2930)5.0e-1257.89Show/hide
Query:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKY
        +LP GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A K+
Subjt:  MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCCCAAGGGCACTCGCTCGGTTTTGGTACAGCCGGTGGTTCAGAATCTAAAGCAAAGTGGAAATGAGATGGAAAAGATGGGAGGATTCATACTGCTGGCCTCAAG
TTTAAGTTATGCATTTAGCGATAAAGATAGAGCCTGGATAAGAGCACTTGCCAACAAATATAATTCGGAAATTAATTTCTTTTTGGTTCACAATAATGTTGGGGTGGGTG
GGGACTTGAACCTTCATTTTCAAGGAAAGCTCATTATGCACAGATTGACATACAAAAGTTACTTTTTAGTGCAATTGTTTGCTAGAGATGGAAAAGAACAGAAACGTAAT
GTCGTGAATATAATCAGAACCTTTAAAAGGGAAATATTCTCTATTTCAATGCCTTTTCTTTTCTCTTCATTGCCTTTGGGTCAAAATCTACGAGACGCGCTTTACGTGCT
TGGAATTAAGTTCTGGATATCATCCACCTATTTGGTACATATTGCCGTTTTCACTTGGATAACCAAAATGAATATGGCAAGTAGATCTTGGCATGAGAACTTTGACATGT
TGCAGCATCAAAATCTCTTGAGAACCTTGGGTTTCGCCTGA
mRNA sequenceShow/hide mRNA sequence
CAGAATCTGGACTGTGGCAAATGCTGCCCAAGGGCACTCGCTCGGTTTTGGTACAGCCGGTGGTTCAGAATCTAAAGCAAAGTGGAAATGAGATGGAAAAGATGGGAGGA
TTCATACTGCTGGCCTCAAGTTTAAGTTATGCATTTAGCGATAAAGATAGAGCCTGGATAAGAGCACTTGCCAACAAATATAATTCGGAAATTAATTTCTTTTTGGTTCA
CAATAATGTTGGGGTGGGTGGGGACTTGAACCTTCATTTTCAAGGAAAGCTCATTATGCACAGATTGACATACAAAAGTTACTTTTTAGTGCAATTGTTTGCTAGAGATG
GAAAAGAACAGAAACGTAATGTCGTGAATATAATCAGAACCTTTAAAAGGGAAATATTCTCTATTTCAATGCCTTTTCTTTTCTCTTCATTGCCTTTGGGTCAAAATCTA
CGAGACGCGCTTTACGTGCTTGGAATTAAGTTCTGGATATCATCCACCTATTTGGTACATATTGCCGTTTTCACTTGGATAACCAAAATGAATATGGCAAGTAGATCTTG
GCATGAGAACTTTGACATGTTGCAGCATCAAAATCTCTTGAGAACCTTGGGTTTCGCCTGATACGAACTCAACTCTCTTTCCTCAAATGTAAATTGTTGGGATGAAGATG
TCAAGATGGTCACTCTGTCCAATGAAAAGTAGAGGCGAAAGTTTCTGATAGAGCTACCAGGGTAGTCTTCGAAGTTCTATAAAAATTTCTCCAAGCCATACACCAGATTC
TGTAAGCACAAAAAGTCAACGGTTTGACATTTGCACATTCAAGAAAAACAGGAGATCTATGTACTGTACCTTAAGGCGCACCACTTTTCTAATTGCCAATAATAAGCCTG
GCATGAGGCATTGCACATTTATGATATCATGTTTGAGAGTGTAAACCTGTGATGCAAGCCATGATAAGTGTCGGAGAATGACAAAACCTACCGCTCTGGTTACAAAATGA
GTAGGAAGGATTAAATTTACCAGTCCCACAGCTCGGACTCGCGCCATTTCTTTCAATTTTAGTTAAACAAGAACGGAAACACAACCTAGAACTCACCTCTCCCGGGCGTG
AGAAGTAGACATTGGTGCTGGAAGGAAGCCCCGGAAGGACTAGACTGTGCACTCGAACTCCGTCTTCTCCAATGACTTGTCCCCTTGCCTAGCAGGCGAAAAGGCAAAAA
TAAGCAAGCTAGTATTTTTTTCAAAAGGACTTCTGAATTTGATGCTTTAGTCATCATTAATTTTCATCAGGTTCTATGAAAATCTTGTAGACATTGTCGGGTCCGTGTTG
GTCAAATTTCTTTAATTCACGTCACAGTAATCAGTTTTTCTTATTCACATTCTTTGACTTTATATGGTAGTAGTCATATGATGTGAAAGTAAAAAGAATAGTAGCTGGTA
CAGCATTCTCATATTTTACTTTTTACCTTTTATCTTTACTCTTAGCAAATACTGATAGATCGAATTAAATGAGGCATCGACTACTCAGAAGGATTTAGCTTACCAGCACA
TCTGTTGAAATATCTTCTCTGTTGTAGATCTGGCCCAAGTTTGAGAGGTTGTTGGCTATTTGGGCTGCATCTGAAGATGGGAGATCCTGTCACCAAAAAAGTCAGTATTT
AATGTCCTATCGGCTACATTTACAACTTTCTCTCTCTGTCTCTAGACTTCTAATAGTACTTTTTTATGGAAAAATTAAAAGTTGAGAGACTAAAAGCCATGTACTTGATT
CAGATGTTTAACAAACCTAATGTAAGTGAGAGGAATAATGCATGATGATTTGTCTATTGTTTGATGACACAATGAAAATGGAGAAGTGTTGCTTATTTTTCTTTCCCTTT
GAAACTGCAGAGTGAATTAGCTGTTCATATAATTTGTTTAACCTGTGCATGCTCTCTGGATTCCACTATCTCTACATTGCTATAATGAAATGAAGCTGAAATTGCTGCTT
GCTGGAGAAGGATAGAGCCAATGGACAGAGTTGGGGCGACAAGACAACCCTGTGACAGAATCCATTAAAGCATTTGCACAGATAAATAAAGAGGAGAGAGAGAGAGCGAG
GAGAAAAAGTGGGTTGAATTAAAATCTCACCCTGTGCTCACCATGCTAGCTTTCTCACAGAAGTTAGATAGTGCAGCCACTGTGTCTACTTTTAATCTAGGAACATAAAC
CACGCTTCTCATGCCAAATGCAGTTGCCTAATTTGAAAACAAAACAAGGCAGAAAGATGAAGTTTTGGGAGTTCGAATATTTCCAGAAGAGAGAGAAGATCCCATCAAAA
AGAAAAAGGGAGTTTGATGTTTGCCCAGTGGGGAAGAAAGATGAAGATTCTACCTGCTTCACGTTCTCATATACTTTAGAAGGTTCGGTAAAATCAACAACTACTCCTGT
TTCCTTTGACTGCAAATTAGCAATAAAATACCGAACTTTTTGAGACTTAAAGCAGACAAAGTGACAGATGAAGTTACTAATATTAAGTATTAGTACCTGAGATATTGAAC
CTAAAACCATGGTTAGATCATTTAATATGGGTAATTCCAGAGGTTCTTCCATGTCACACACCTAATTTCATTTGTACAGATCAGCAAAACAAAACCACAGAGAAGATAAA
CAAAGAGATAGAGACAGAGAGAAAGAGAGACCTTTCCAATGTCTTCTCCTACAGAATGTGAATCAACAGCACCAGCAACTTCCATTCCTCTTGCCTTTGTCACTGCAATA
ACTGCAGCTCTTCCAATTTCTTTGGCTGCTCCATTTATAATGACCTGTTTAAACAACATTTATGAATCTTTGCTGTTGAACTAAACACATAAGACTTATTGCAGGTGATT
GTTGGGTGTGACCTTGATATTTCCCTGAGATGGTTGTACTGAGCAGAGAATTGAAGATCTAGGTTTCTTCTTCTTTGAGTTCTTATACACTGTAAAGGGAAACTGGCAAC
CCAGGGCCGCCATTGTTGTTGGTTTCAAAGCTCTGTTTCTTCTTCTCTTTCGGAGCTGAAATGGGTCCAACTCCGTAAGAAGATAAGCCCATTTTCATCTTAGCCTTGTG
TTTTTGTTTGATAAGGTTCTTGTGTTTGTGACCTGTGAATTTGAGCTCATGCGACAGCGACGGGTTAACAATTTTCTTGAGAAAATGTAATTAAATGACTGTAAGAATTT
ATTTACTCCGAATTAGATTTGGGCTATTCGGCTATAGAGATTTGGTCCCCTTCTAGAATCGGTTTGTTTCTTCGTCATTTCTTTTGAT
Protein sequenceShow/hide protein sequence
MLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKYNSEINFFLVHNNVGVGGDLNLHFQGKLIMHRLTYKSYFLVQLFARDGKEQKRN
VVNIIRTFKREIFSISMPFLFSSLPLGQNLRDALYVLGIKFWISSTYLVHIAVFTWITKMNMASRSWHENFDMLQHQNLLRTLGFA