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MELO3C031806 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031806
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPHD finger protein ALFIN-LIKE 3-like
Genome locationchr01:18026997..18027245
RNA-Seq ExpressionMELO3C031806
SyntenyMELO3C031806
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036625.1 PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo var. makuwa]6.3e-2698.25Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
        MYAR+SQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
XP_004141692.1 PHD finger protein ALFIN-LIKE 3 [Cucumis sativus]2.5e-2291.07Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        MYARQSQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
XP_008462330.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo]2.5e-2291.07Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        MYARQSQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
XP_008462331.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo]2.5e-2291.07Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        MYARQSQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
XP_038897957.1 PHD finger protein ALFIN-LIKE 3-like [Benincasa hispida]9.5e-2289.29Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        MYARQ QAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
TrEMBL top hitse value%identityAlignment
A0A0A0K9L1 PHD-type domain-containing protein1.2e-2291.07Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        MYARQSQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
A0A1S3CGR0 PHD finger protein ALFIN-LIKE 3-like isoform X21.2e-2291.07Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        MYARQSQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
A0A1S3CI87 PHD finger protein ALFIN-LIKE 3-like isoform X11.2e-2291.07Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        MYARQSQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
A0A5D3BW61 PHD finger protein ALFIN-LIKE 3-like isoform X13.1e-2698.25Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
        MYAR+SQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
A0A5D3BXQ0 PHD finger protein ALFIN-LIKE 3-like isoform X21.2e-2291.07Show/hide
Query:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        MYARQSQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
SwissProt top hitse value%identityAlignment
B8B8C5 PHD finger protein ALFIN-LIKE 96.4e-1375.68Show/hide
Query:  EDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        E++H +TLCGAC E+Y  DEFWICCDICEKWFHGK V
Subjt:  EDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
O81488 PHD finger protein ALFIN-LIKE 47.6e-1468.09Show/hide
Query:  EEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        EE E + EEDED+  +T CGAC E+YA DEFWICCD+CE WFHGK V
Subjt:  EEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
Q5XEM9 PHD finger protein ALFIN-LIKE 56.8e-1570.21Show/hide
Query:  EEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        EE E   +EDED+H +TLCGAC +NYA DEFWICCD+CEKWFHG+ V
Subjt:  EEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
Q9FFF5 PHD finger protein ALFIN-LIKE 17.6e-1462.22Show/hide
Query:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +E  YE+++D+H DTLCG+C  NY  DEFWICCD+CE+W+HGK V
Subjt:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
Q9M2B4 PHD finger protein ALFIN-LIKE 32.6e-1459.26Show/hide
Query:  ARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        ++  Q +EE E + E+DED H +TLCGAC ++   DEFWICCD+CEKWFHGK V
Subjt:  ARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
Arabidopsis top hitse value%identityAlignment
AT3G42790.1 alfin-like 31.8e-1559.26Show/hide
Query:  ARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        ++  Q +EE E + E+DED H +TLCGAC ++   DEFWICCD+CEKWFHGK V
Subjt:  ARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
AT5G05610.1 alfin-like 15.4e-1562.22Show/hide
Query:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +E  YE+++D+H DTLCG+C  NY  DEFWICCD+CE+W+HGK V
Subjt:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
AT5G05610.2 alfin-like 15.4e-1562.22Show/hide
Query:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +E  YE+++D+H DTLCG+C  NY  DEFWICCD+CE+W+HGK V
Subjt:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
AT5G20510.1 alfin-like 54.9e-1670.21Show/hide
Query:  EEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        EE E   +EDED+H +TLCGAC +NYA DEFWICCD+CEKWFHG+ V
Subjt:  EEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
AT5G26210.1 alfin-like 45.4e-1568.09Show/hide
Query:  EEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        EE E + EEDED+  +T CGAC E+YA DEFWICCD+CE WFHGK V
Subjt:  EEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCAAGACAGTCGCAGGCAAGGGAAGAGGTAGAGACGTTGTATGAAGAAGATGAAGACAAACACAATGACACCTTATGTGGGGCATGCGATGAGAATTATGCTTT
AGATGAATTTTGGATTTGTTGTGATATCTGTGAGAAATGGTTCCATGGAAAATTTGTTGTATGA
mRNA sequenceShow/hide mRNA sequence
TACCAGGTTGATTACTCAGATTGGTTACTTATTCTATCTTTCAAGAATTTTCATAGGAAAGCTGAATTGCAAGGAATGTATGCAAGACAGTCGCAGGCAAGGGAAGAGGT
AGAGACGTTGTATGAAGAAGATGAAGACAAACACAATGACACCTTATGTGGGGCATGCGATGAGAATTATGCTTTAGATGAATTTTGGATTTGTTGTGATATCTGTGAGA
AATGGTTCCATGGAAAATTTGTTGTATGA
Protein sequenceShow/hide protein sequence
MYARQSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV