; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C031809 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031809
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptiontranscription factor LAF1-like isoform X2
Genome locationchr06:7056910..7061116
RNA-Seq ExpressionMELO3C031809
SyntenyMELO3C031809
Gene Ontology termsGO:0000494 - box C/D snoRNA 3'-end processing (biological process)
GO:0031167 - rRNA methylation (biological process)
GO:1990258 - histone glutamine methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031428 - box C/D snoRNP complex (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008649 - rRNA methyltransferase activity (molecular function)
GO:1990259 - histone-glutamine methyltransferase activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033637.1 transcription factor LAF1-like isoform X2 [Cucumis melo var. makuwa]8.8e-7199.25Show/hide
Query:  MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR
        MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR
Subjt:  MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR

Query:  TTSREGYGFEMLNWDLDFEGHISDGFATCDELW
        TTSREGYGFEMLNWDLDFEGHISDGFATCDELW
Subjt:  TTSREGYGFEMLNWDLDFEGHISDGFATCDELW

XP_008439216.1 PREDICTED: transcription factor LAF1-like isoform X1 [Cucumis melo]2.8e-6995.68Show/hide
Query:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
        MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
Subjt:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF

Query:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW
        DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW
Subjt:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW

XP_008439218.1 PREDICTED: transcription factor LAF1-like isoform X2 [Cucumis melo]3.0e-71100Show/hide
Query:  MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR
        MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR
Subjt:  MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR

Query:  TTSREGYGFEMLNWDLDFEGHISDGFATCDELW
        TTSREGYGFEMLNWDLDFEGHISDGFATCDELW
Subjt:  TTSREGYGFEMLNWDLDFEGHISDGFATCDELW

XP_008439219.1 PREDICTED: transcription factor LAF1-like isoform X3 [Cucumis melo]2.8e-6995.68Show/hide
Query:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
        MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
Subjt:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF

Query:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW
        DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW
Subjt:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW

XP_008439220.1 PREDICTED: transcription factor LAF1-like isoform X4 [Cucumis melo]4.1e-6895.65Show/hide
Query:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
        MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
Subjt:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF

Query:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDEL
        DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDEL
Subjt:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDEL

TrEMBL top hitse value%identityAlignment
A0A1S3AXV7 transcription factor LAF1-like isoform X21.5e-71100Show/hide
Query:  MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR
        MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR
Subjt:  MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR

Query:  TTSREGYGFEMLNWDLDFEGHISDGFATCDELW
        TTSREGYGFEMLNWDLDFEGHISDGFATCDELW
Subjt:  TTSREGYGFEMLNWDLDFEGHISDGFATCDELW

A0A1S3AY85 transcription factor LAF1-like isoform X42.0e-6895.65Show/hide
Query:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
        MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
Subjt:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF

Query:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDEL
        DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDEL
Subjt:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDEL

A0A1S3AYA7 transcription factor LAF1-like isoform X31.4e-6995.68Show/hide
Query:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
        MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
Subjt:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF

Query:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW
        DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW
Subjt:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW

A0A1S3AYW8 transcription factor LAF1-like isoform X11.4e-6995.68Show/hide
Query:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
        MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF
Subjt:  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSF

Query:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW
        DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW
Subjt:  DGEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELW

A0A5D3DH52 Transcription factor LAF1-like isoform X24.3e-7199.25Show/hide
Query:  MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR
        MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGS+RSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR
Subjt:  MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRR

Query:  TTSREGYGFEMLNWDLDFEGHISDGFATCDELW
        TTSREGYGFEMLNWDLDFEGHISDGFATCDELW
Subjt:  TTSREGYGFEMLNWDLDFEGHISDGFATCDELW

SwissProt top hitse value%identityAlignment
O49782 Transcription factor MYB511.8e-1349.3Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMG-SSGSKRSETRP
        F++ E+  I++LH L GN+WS IA+ L GRTDNEIKNYWN+H+KK+++     P+   G +SG+ +SE  P
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMG-SSGSKRSETRP

P20027 Myb-related protein Hv333.6e-1472.34Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKV
        FSQQE++ I+ LH++LGNRWSQIA HL GRTDNEIKN+WNS +KKK+
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKV

Q42379 Transcription factor MYB71.3e-1352.17Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETR
        F+  EDE I+ LH LLGN+WS IA  L GRTDNEIKNYWN+H+K+K++S    P    G + +K S+ +
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETR

Q9FJP2 Transcription factor MYB533.6e-1461.82Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPL
        FS +E+E IL LH +LGN+WS IA HL GRTDNEIKN+WN+HLKKK++     P+
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPL

Q9S9Z2 Transcription factor MYB931.8e-1366.67Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV
        FS +E++ IL LH +LGN+WS IA HL GRTDNEIKN+WN+HLKKK++
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV

Arabidopsis top hitse value%identityAlignment
AT1G18570.1 myb domain protein 511.3e-1449.3Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMG-SSGSKRSETRP
        F++ E+  I++LH L GN+WS IA+ L GRTDNEIKNYWN+H+KK+++     P+   G +SG+ +SE  P
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMG-SSGSKRSETRP

AT1G34670.1 myb domain protein 931.3e-1466.67Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV
        FS +E++ IL LH +LGN+WS IA HL GRTDNEIKN+WN+HLKKK++
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV

AT2G16720.1 myb domain protein 79.6e-1552.17Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETR
        F+  EDE I+ LH LLGN+WS IA  L GRTDNEIKNYWN+H+K+K++S    P    G + +K S+ +
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETR

AT5G54230.1 myb domain protein 498.7e-1672.92Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV
        FS QE+E I+ LHRLLGN+WS IA HL GRTDNEIKNYWN+H+KKK++
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV

AT5G65230.1 myb domain protein 532.5e-1561.82Show/hide
Query:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPL
        FS +E+E IL LH +LGN+WS IA HL GRTDNEIKN+WN+HLKKK++     P+
Subjt:  FSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGTGGTCTCAAATAGCACAGCATTTAGCGGGAAGAACAGACAACGAGATAAA
GAACTATTGGAATTCTCATCTCAAGAAGAAAGTGGTCTCGAATCGAGATCCGCCGTTGGAGGGGATGGGAAGTTCGGGCAGTAAGCGGAGTGAAACCCGACCAAGGGTCT
TGTTTGCAGAATGGCTTTCTGTGTCTGATATTAATAGTGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAACAACAAGTAGAGAGGGCTATGGCTTTGAG
ATGCTCAATTGGGACCTTGATTTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATGAACTGTGGTAA
mRNA sequenceShow/hide mRNA sequence
TCAATAATATAACGCGGACATATGTGGAGTTCCATTTTCATATTTTAAAGGTTTCTTTTTTTACTATGGTTGAAATGAAAAATAATGAGAAGACGTAAAAATAGAAAAAC
AGAGTATAAAAGGGGAAGCCAAGATGAAAAGAGCTTAAACAATAAAAACTTGGTAGAAAATCAAAGAAGAGAAAGAGAGATGGGATGTAGAGAAACAGAGAAAGAAAAAG
TGAAGAAGAAAGGATTATGGTCACCTGAGGAAGATGAAAAGTTAAGAAGCTTCATCCTCAAGAATGGCCATGGCTGCTGGACCTCTGTCCCCATTAAAGCTGGTGAAGCA
TGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGTGGTCTCAAATAGCACAGCATTTAGCGGGAAGAACAGACAACGAGATAAAG
AACTATTGGAATTCTCATCTCAAGAAGAAAGTGGTCTCGAATCGAGATCCGCCGTTGGAGGGGATGGGAAGTTCGGGCAGTAAGCGGAGTGAAACCCGACCAAGGGTCTT
GTTTGCAGAATGGCTTTCTGTGTCTGATATTAATAGTGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAACAACAAGTAGAGAGGGCTATGGCTTTGAGA
TGCTCAATTGGGACCTTGATTTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATGAACTGTGGTAAAATAATTATTTGATCTTTTCCAAAATTAAATTTGCAACA
TTCATTCTAATACGAAGAACATAGTAAGAAATATGTTTATTACATGATATACAGTTCTATCTTGATCTATTGATTAATTTAAAGATTTTGTATTAATTATTAATTTAATT
GGATATCAGAGTAGGCTGTTCAAGAGGTTGTGTTTAAACCCCGACCTACAAGTAAAAAAATATGTTAAGTGATATAATATTAAGTTTATGTGTCCAAACCTCAGCCGACA
AGTAAGAGAAATGTTATATGATATAATGTTAAATTTATTTCACCGATTCACAACGTGGAAGAAGATTAACTTTTCTTTAAATTAAGCTTATCATTTTTTTTTTGACTAAT
TTGGTAGAAACAAATTAAAAGCTACATGCATCTTTTGATTGTAGTATTATTTATGAAAGCAAAATGGTTAATTAAGCTATGATTTTAGGTTTGGAAAAGAAAGTGAATGA
CAAGTCTTATATTGGTCTTCTAAAGGGGCATATTTTTCTCCCACATACCAATTTGTTTGATTGGAGTCTCTTTTCTGGTTCGAATGTAGTCGAGAACAATCGGACTAAAA
GGTGGAAGCAAGAAGCAAGGGCTCGAGAAGGAAGGTCGTTTTACGAGGGTATCCATCATGAACTTGGCGGCTAAGCCTTGGTTAGGGCAAGCCAAATCGTCCCAGGAAAT
TTCAGTAGCATTTGGTGGGATGGTTGGCTTGAAAGTTAAGAGCTTGGAGTATTCATTTAGACTATGAAACATGTAATCATACACCTTTTCCATGTTTAGTTGTTCTTCCA
TGTACTTACTTGCTGCCTTTCCAATTGCTTGTGCCTAACAAAGACATTTAAGAAACACAAATTTTAGTCGATCATTCTATGCATTTTTACATTTTTTCTCACACAATCTA
ATAGTTTTGATCAATCACATTGTCATGTCTACCTTTAAAAAGTTTATTTACAAAGAGATGATAGATATCATTATTTTA
Protein sequenceShow/hide protein sequence
MFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVSNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTSREGYGFE
MLNWDLDFEGHISDGFATCDELW