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MELO3C031813 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031813
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionmultiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like
Genome locationchr06:7197171..7198738
RNA-Seq ExpressionMELO3C031813
SyntenyMELO3C031813
Gene Ontology termsGO:0016554 - cytidine to uridine editing (biological process)
InterPro domainsIPR039206 - MORF/ORRM1/DAG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059032.1 multiple organellar RNA editing factor 8 [Cucumis melo var. makuwa]3.6e-2142.68Show/hide
Query:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------
        SVRDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ YIKTLAMVVG                               
Subjt:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------

Query:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA
                      Y+D++NK+Y GEPFINGQAVPYD KYH+++ +       R  R DRP  A
Subjt:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA

XP_008451724.1 PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucumis melo]3.6e-2142.68Show/hide
Query:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------
        SVRDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ YIKTLAMVVG                               
Subjt:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------

Query:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA
                      Y+D++NK+Y GEPFINGQAVPYD KYH+++ +       R  R DRP  A
Subjt:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA

XP_008456056.1 PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucumis melo]5.1e-3154.84Show/hide
Query:  SVRDFSTS-DPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG---------------------------------------
        SVR FSTS DPKP   N PPTFSD GCDF+HWLVVMDL  A+LTRDEMINIYIKTLAMVVG                                       
Subjt:  SVRDFSTS-DPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG---------------------------------------

Query:  -----RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFG
              Y DIENKNY GEPFINGQAVPYD KYH+ YY+R NR  +PC  CK  FG
Subjt:  -----RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFG

XP_031740169.1 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucumis sativus]5.2e-2041.61Show/hide
Query:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------
        S+RDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ YIKTLAMVVG                               
Subjt:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------

Query:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRP
                      Y+D++NK+Y GEPFI+GQAVPYD KYH+++ +       R  R DRP
Subjt:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRP

XP_038904331.1 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Benincasa hispida]4.0e-2041.61Show/hide
Query:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------
        SVR+F+T       +DP P +SN PP  T    GCDFEHWLVVM+ P   LTRDE+I+ YIKTLAMVVG                               
Subjt:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------

Query:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRP
                      Y+D++NK+Y GEPFINGQAVPYD KYH+++ +       R  R DRP
Subjt:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRP

TrEMBL top hitse value%identityAlignment
A0A1S3BTA4 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial1.8e-2142.68Show/hide
Query:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------
        SVRDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ YIKTLAMVVG                               
Subjt:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------

Query:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA
                      Y+D++NK+Y GEPFINGQAVPYD KYH+++ +       R  R DRP  A
Subjt:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA

A0A1S3C315 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like2.4e-3154.84Show/hide
Query:  SVRDFSTS-DPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG---------------------------------------
        SVR FSTS DPKP   N PPTFSD GCDF+HWLVVMDL  A+LTRDEMINIYIKTLAMVVG                                       
Subjt:  SVRDFSTS-DPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG---------------------------------------

Query:  -----RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFG
              Y DIENKNY GEPFINGQAVPYD KYH+ YY+R NR  +PC  CK  FG
Subjt:  -----RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFG

A0A5A7TBM4 Multiple organellar RNA editing factor 82.4e-3154.84Show/hide
Query:  SVRDFSTS-DPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG---------------------------------------
        SVR FSTS DPKP   N PPTFSD GCDF+HWLVVMDL  A+LTRDEMINIYIKTLAMVVG                                       
Subjt:  SVRDFSTS-DPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG---------------------------------------

Query:  -----RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFG
              Y DIENKNY GEPFINGQAVPYD KYH+ YY+R NR  +PC  CK  FG
Subjt:  -----RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFG

A0A5A7UT11 Multiple organellar RNA editing factor 81.8e-2142.68Show/hide
Query:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------
        SVRDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ YIKTLAMVVG                               
Subjt:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------

Query:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA
                      Y+D++NK+Y GEPFINGQAVPYD KYH+++ +       R  R DRP  A
Subjt:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA

A0A5D3CZ72 Multiple organellar RNA editing factor 81.8e-2142.68Show/hide
Query:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------
        SVRDFST       +DP P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ YIKTLAMVVG                               
Subjt:  SVRDFST-------SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------

Query:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA
                      Y+D++NK+Y GEPFINGQAVPYD KYH+++ +       R  R DRP  A
Subjt:  -------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRPCEA

SwissProt top hitse value%identityAlignment
Q38732 DAG protein, chloroplastic3.1e-0726.27Show/hide
Query:  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG--------------------------------------------RYIDIENKNYRGEPFINGQ
        GCD+ HWL+VM+ P+    TR++MI+ Y+ TLA V+G                                             YID++NK+Y G+ ++NG+
Subjt:  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG--------------------------------------------RYIDIENKNYRGEPFINGQ

Query:  AVPYDLKYHQQYYKRINR
         +P     +Q    R ++
Subjt:  AVPYDLKYHQQYYKRINR

Q84JZ6 Multiple organellar RNA editing factor 3, mitochondrial3.9e-1030.58Show/hide
Query:  SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG--------------------------------------------R
        +DP P +SN PP  T    GCD+EHWL+VM+    K T +EMIN Y+KTL  V+G                                             
Subjt:  SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG--------------------------------------------R

Query:  YIDIENKNYRGEPFINGQAVP
        Y+D+ NK+Y G+ ++ G+ +P
Subjt:  YIDIENKNYRGEPFINGQAVP

Q9CAH0 Multiple organellar RNA editing factor 7, mitochondrial4.0e-0727.19Show/hide
Query:  GCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVGR---------------------------------------------YIDIENKNYRGEPFINGQ
        GCD++HWLV+M  P    TR+ ++  +++TLAM +G                                               +D +N+ Y GEPF++G+
Subjt:  GCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVGR---------------------------------------------YIDIENKNYRGEPFINGQ

Query:  AVPYDLKYHQQYYK
         VPYD KYH  + +
Subjt:  AVPYDLKYHQQYYK

Q9LKA5 Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial1.6e-1938.26Show/hide
Query:  STSDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------------------
        S +DP P +SN PP  T    GCDFEHWLVV++ P+ + TRDE+I+ YIKTLA +VG                                           
Subjt:  STSDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------------------

Query:  -RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRP
          Y+D+ NK+Y GEPFI+G+AVPYD KYH+++ +       R  R DRP
Subjt:  -RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRP

Q9LPZ1 Multiple organellar RNA editing factor 9, chloroplastic4.0e-0729.13Show/hide
Query:  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG--------------------------------------------RYIDIENKNYRGEPFINGQ
        GCD+ HWL+VM+ P+    +RD+MI+ Y+ TLA V+G                                             YID++NK+Y G+ +ING+
Subjt:  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG--------------------------------------------RYIDIENKNYRGEPFINGQ

Query:  AVP
         +P
Subjt:  AVP

Arabidopsis top hitse value%identityAlignment
AT1G11430.1 plastid developmental protein DAG, putative2.9e-0829.13Show/hide
Query:  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG--------------------------------------------RYIDIENKNYRGEPFINGQ
        GCD+ HWL+VM+ P+    +RD+MI+ Y+ TLA V+G                                             YID++NK+Y G+ +ING+
Subjt:  GCDFEHWLVVMDLPRAKL-TRDEMINIYIKTLAMVVG--------------------------------------------RYIDIENKNYRGEPFINGQ

Query:  AVP
         +P
Subjt:  AVP

AT1G72530.1 plastid developmental protein DAG, putative2.9e-0827.19Show/hide
Query:  GCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVGR---------------------------------------------YIDIENKNYRGEPFINGQ
        GCD++HWLV+M  P    TR+ ++  +++TLAM +G                                               +D +N+ Y GEPF++G+
Subjt:  GCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVGR---------------------------------------------YIDIENKNYRGEPFINGQ

Query:  AVPYDLKYHQQYYK
         VPYD KYH  + +
Subjt:  AVPYDLKYHQQYYK

AT3G06790.1 plastid developmental protein DAG, putative2.8e-1130.58Show/hide
Query:  SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG--------------------------------------------R
        +DP P +SN PP  T    GCD+EHWL+VM+    K T +EMIN Y+KTL  V+G                                             
Subjt:  SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG--------------------------------------------R

Query:  YIDIENKNYRGEPFINGQAVP
        Y+D+ NK+Y G+ ++ G+ +P
Subjt:  YIDIENKNYRGEPFINGQAVP

AT3G06790.2 plastid developmental protein DAG, putative2.8e-1130.58Show/hide
Query:  SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG--------------------------------------------R
        +DP P +SN PP  T    GCD+EHWL+VM+    K T +EMIN Y+KTL  V+G                                             
Subjt:  SDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG--------------------------------------------R

Query:  YIDIENKNYRGEPFINGQAVP
        Y+D+ NK+Y G+ ++ G+ +P
Subjt:  YIDIENKNYRGEPFINGQAVP

AT3G15000.1 cobalt ion binding1.1e-2038.26Show/hide
Query:  STSDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------------------
        S +DP P +SN PP  T    GCDFEHWLVV++ P+ + TRDE+I+ YIKTLA +VG                                           
Subjt:  STSDPKPKYSNDPP--TFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVG-------------------------------------------

Query:  -RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRP
          Y+D+ NK+Y GEPFI+G+AVPYD KYH+++ +       R  R DRP
Subjt:  -RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYK-------RINRLDRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTGAGGGACTTTTCTACGTCTGACCCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGA
TTTGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGATACATTGATATTGAAAACAAAAACTATAGAGGGG
AGCCCTTTATAAACGGACAAGCTGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTT
GGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAA
mRNA sequenceShow/hide mRNA sequence
TTCGTGAATTCTATCCCGCCGCCGTCCAAATTCTTTGTTTAAAGAGTGAATTAGATTAGCCATCCCAAAACCATCATCTTTGTTTCTTCTCTTCATCCTTAATAATCCCA
TGGCGATCCTAGCTCTTCTCACGCTCTCTCCCTAAAACCCTAATTTTGGGTTCTACATTCTCACGTTCCTTCCTTACTGCCACCGGAACCGCCGTATCAGCCTCTTCTCG
CTCATCTTTCTCCCTTCTGCGCCGCCTCCTTCCCCTCGCTGCTATAGTCGCCGCTGATTTCGGGTTTCTCTCTTCTGCCATGAGCGTGAGGGACTTTTCTACGTCTGACC
CGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTTGCCAAGGGCTAAACTCACGAGGGATGAG
ATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGATACATTGATATTGAAAACAAAAACTATAGAGGGGAGCCCTTTATAAACGGACAAGCTGTTCCATA
TGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTT
GGAGCGATTCGGAGGAGTTAGACTAAAGAGATGTTAGACTTTAAATATTGCATATTCTTATTCCGAGTAGTTTCTTCTAATTTTATTTTATTTTATTTTTAATTTTACTA
TAGCTCTTTTAATTATGAAATTTCTATTTTATCATTTAAATTATTTAATTTTTCTTTTTGCCCTTGA
Protein sequenceShow/hide protein sequence
MSVRDFSTSDPKPKYSNDPPTFSDYGCDFEHWLVVMDLPRAKLTRDEMINIYIKTLAMVVGRYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLF
GGIELSHIRLWSDSEELD