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MELO3C031824 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031824
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDUF4283 domain-containing protein
Genome locationchr06:7409960..7413735
RNA-Seq ExpressionMELO3C031824
SyntenyMELO3C031824
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047412.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]4.2e-1053.16Show/hide
Query:  FNLTGKMTSILFVVWISFLILQ-------VVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIK
        +NL GK   +L   W   ++L+       +V I+LGRIPM+LWTE+G+ V+ +VVGKP+TLDLATKE RRLSYARV ++
Subjt:  FNLTGKMTSILFVVWISFLILQ-------VVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIK

KAA0047960.1 uncharacterized protein E6C27_scaffold385G00200 [Cucumis melo var. makuwa]1.2e-0987.18Show/hide
Query:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT
        +NGFHSELTN GESIED+GEE+DDFDGWEFK AESVTPT
Subjt:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT

KAA0060724.1 hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa]6.5e-1167.8Show/hide
Query:  VWISFLILQVVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIK
        VW + L++  V IRLGRIPM+LWTE+G+ V+ + VGKPITLDLATKE RRLSYARV +K
Subjt:  VWISFLILQVVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIK

XP_008454772.1 PREDICTED: uncharacterized protein LOC103495090 isoform X1 [Cucumis melo]1.2e-0987.18Show/hide
Query:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT
        +NGFHSELTN GESIED+GEE+DDFDGWEFK AESVTPT
Subjt:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT

XP_008454780.1 PREDICTED: uncharacterized protein LOC103495090 isoform X2 [Cucumis melo]1.2e-0987.18Show/hide
Query:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT
        +NGFHSELTN GESIED+GEE+DDFDGWEFK AESVTPT
Subjt:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT

TrEMBL top hitse value%identityAlignment
A0A1S3C046 uncharacterized protein LOC103495090 isoform X16.0e-1087.18Show/hide
Query:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT
        +NGFHSELTN GESIED+GEE+DDFDGWEFK AESVTPT
Subjt:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT

A0A5A7TVB8 Putative non-LTR retroelement reverse transcriptase2.0e-1053.16Show/hide
Query:  FNLTGKMTSILFVVWISFLILQ-------VVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIK
        +NL GK   +L   W   ++L+       +V I+LGRIPM+LWTE+G+ V+ +VVGKP+TLDLATKE RRLSYARV ++
Subjt:  FNLTGKMTSILFVVWISFLILQ-------VVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIK

A0A5A7V084 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein3.2e-1167.8Show/hide
Query:  VWISFLILQVVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIK
        VW + L++  V IRLGRIPM+LWTE+G+ V+ + VGKPITLDLATKE RRLSYARV +K
Subjt:  VWISFLILQVVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIK

A0A5D3D449 Uncharacterized protein6.0e-1087.18Show/hide
Query:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT
        +NGFHSELTN GESIED+GEE+DDFDGWEFK AESVTPT
Subjt:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT

A6YTC8 Nucleolar GTPase6.0e-1087.18Show/hide
Query:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT
        +NGFHSELTN GESIED+GEE+DDFDGWEFK AESVTPT
Subjt:  ANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGATACAGAAGATAAAATATTATGTTACAAGAGAAATGAACCAACCAGTCAGCTAAGTGATGCTAATGGTTTTCATTCTGAGTTGACAAACGACGGTGAGAGCATTGA
GGATAATGGCGAGGAGCTGGATGATTTTGATGGCTGGGAATTTAAGGTTGCAGAGTCGGTTACGCCTACAGTATTGGTTGATGTTGAGTATGACCTATTGATTCTCAAAG
AACAGAAAACAGAACTGGTGGGGCTCAAATTCATTGATTCATTGTTTATGCAAATGGAGAATCTGAATGAACTGAACGAATTAACGTGCTTCAATCTGACAGGGAAAATG
ACCTCCATTTTGTTTGTTGTTTGGATTTCTTTTCTCATACTTCAAGTTGTGAAGATTAGATTGGGTAGAATCCCGATGAAGTTATGGACCGAATCGGGGATGATTGTTAT
TGTAAATGTTGTGGGTAAGCCCATAACATTAGATTTGGCCACTAAGGAGAGTCGTAGGCTATCTTATGCTCGTGTAACAATAAAATCAACTCCTTTGATGTTAATAATAA
TTTCAACCGGCATATGA
mRNA sequenceShow/hide mRNA sequence
AGAAAGATACAGAAGATAAAATATTATGTTACAAGAGAAATGAACCAACCAGTCAGCTAAGTGATGCTAATGGTTTTCATTCTGAGTTGACAAACGACGGTGAGAGCATT
GAGGATAATGGCGAGGAGCTGGATGATTTTGATGGCTGGGAATTTAAGGTTGCAGAGTCGGTTACGCCTACAGTATTGGTTGATGTTGAGTATGACCTATTGATTCTCAA
AGAACAGAAAACAGAACTGGTGGGGCTCAAATTCATTGATTCATTGTTTATGCAAATGGAGAATCTGAATGAACTGAACGAATTAACGTGCTTCAATCTGACAGGGAAAA
TGACCTCCATTTTGTTTGTTGTTTGGATTTCTTTTCTCATACTTCAAGTTGTGAAGATTAGATTGGGTAGAATCCCGATGAAGTTATGGACCGAATCGGGGATGATTGTT
ATTGTAAATGTTGTGGGTAAGCCCATAACATTAGATTTGGCCACTAAGGAGAGTCGTAGGCTATCTTATGCTCGTGTAACAATAAAATCAACTCCTTTGATGTTAATAAT
AATTTCAACCGGCATATGA
Protein sequenceShow/hide protein sequence
KDTEDKILCYKRNEPTSQLSDANGFHSELTNDGESIEDNGEELDDFDGWEFKVAESVTPTVLVDVEYDLLILKEQKTELVGLKFIDSLFMQMENLNELNELTCFNLTGKM
TSILFVVWISFLILQVVKIRLGRIPMKLWTESGMIVIVNVVGKPITLDLATKESRRLSYARVTIKSTPLMLIIISTGI