CuGenDBv2

Gene ID	MELO3C031836
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome location	chr06:22560328..22560922
RNA-Seq Expression	MELO3C031836
Synteny	MELO3C031836
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ASY96384.1 NADH dehydrogenase subunit 1 [Cucumis melo subsp. agrestis]

1.5e-33

100

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

QCY72897.1 NdhA [Cucumis hystrix]

4.4e-33

98.73

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

YP_004841840.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis melo subsp. melo]

1.5e-33

100

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

YP_009004096.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis hystrix]

4.4e-33

98.73

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

YP_247655.1 NADH dehydrogenase subunit 1 [Cucumis sativus]

4.4e-33

98.73

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU64 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

7.2e-34

100

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

A0A249RXW7 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

7.2e-34

100

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

A0A249RZ39 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

7.2e-34

100

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

A0A286NFL5 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

7.2e-34

100

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

A0A286NG39 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

7.2e-34

100

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

SwissProt top hits

e value

%identity

Alignment

A0A390 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

6.3e-35

96.2

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIAVISILLSYSVIPFGYRLVLADL IGVFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

Q06R75 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

5.3e-34

92.41

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIAVISILLSYSVIPFGYRL+L DL IGVFLWIA+SS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

Q09FZ1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

4.1e-34

93.67

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIA+ISILLSYSVIPFGYRLVLADL IGVFLWIAISS+APIGLLMSGYGSNNKYSF GGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

Q1KXQ8 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

4.1e-34

93.67

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIAVISILLSY VIPFGYRLVLADL IGVFLWIAISS+AP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

5.7e-36

98.73

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

Arabidopsis top hits

e value

%identity

Alignment

ATCG01100.1 NADH dehydrogenase family protein

1.6e-33

91.14

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
        +GPSIAVISILLSYSVIPF   LVLADL IG+FLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

ATMG00516.1 NADH dehydrogenase 1C

1.0e-11

43.59

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTL
        M P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G++++G  SN+KY+FLG LR+AAQ +SYE+ + L
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTL

ATMG01120.1 NADH dehydrogenase 1B

1.0e-11

43.59

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTL
        M P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G++++G  SN+KY+FLG LR+AAQ +SYE+ + L
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTL

ATMG01275.1 NADH dehydrogenase 1A

1.0e-11

43.59

Show/hide

Query:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTL
        M P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G++++G  SN+KY+FLG LR+AAQ +SYE+ + L
Subjt:  MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTACCTATCGGTGTTTTTTTATGGATTGC
CATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTCTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAA
TACCATTAACTCTATGT

mRNA sequence

Show/hide mRNA sequence

GCTGATATTATGACAATACTAGGTAGCATAGATATCATTATGGGAGAAGTTGATCGTTAAAATGATAATTGATACATCACAAGTCCAAGATATCAATTCTTTTTCGAGAT
TGGAATTCAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGAATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGC
TTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATCTGCTTCCATCTAGAGGTGATACTCGCTTATTCAGTATGGGACCATCCATAGCAGTCATATCAATTTTACTAA
GCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTACCTATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCA
GGATATGGATCCAATAATAAATATTCCTTCTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGT

Protein sequence

Show/hide protein sequence

MGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLC

MELO3C031836 (gene) of Melon (DHL92) v4 genome