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MELO3C031840 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031840
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 1
Genome locationchr06:7888545..7890580
RNA-Seq ExpressionMELO3C031840
SyntenyMELO3C031840
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR003656 - Zinc finger, BED-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACX85638.1 putative transposase [Cucumis melo]2.0e-3461.6Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCGASY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSES++M  SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQ
        QENCR M A+M +     F  ++S+
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQ

KAA0026183.1 putative transposase [Cucumis melo var. makuwa]2.0e-3461.6Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCGASY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSES++M  SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQ
        QENCR M A+M +     F  ++S+
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQ

KAA0055978.1 putative transposase [Cucumis melo var. makuwa]2.7e-3467.26Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCG SY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESS+MA SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKV
        QENCR M A+M +
Subjt:  QENCRTMFAKMKV

TYK06161.1 putative transposase [Cucumis melo var. makuwa]9.1e-3562.4Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCG SY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESS+MA SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQ
        QENCR M A+M +     F  ++S+
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQ

TYK30776.1 putative transposase [Cucumis melo var. makuwa]2.0e-3461.6Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCGASY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSES++M  SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQ
        QENCR M A+M +     F  ++S+
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQ

TrEMBL top hitse value%identityAlignment
A0A5A7SNJ1 Putative transposase9.9e-3561.6Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCGASY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSES++M  SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQ
        QENCR M A+M +     F  ++S+
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQ

A0A5A7VNA7 Putative transposase1.3e-3460.63Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCGA Y CDSKRNGTTNLKRHLEKCK YVNPLEDNVEGEGDSESS+MA SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQVY
        QENCR M A+M +     F  ++S+ +
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQVY

A0A5D3C2L4 Putative transposase4.4e-3562.4Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCG SY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESS+MA SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQ
        QENCR M A+M +     F  ++S+
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQ

A0A5D3E4G3 Putative transposase9.9e-3561.6Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCGASY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSES++M  SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQ
        QENCR M A+M +     F  ++S+
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQ

D0UIX2 Putative transposase9.9e-3561.6Show/hide
Query:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT
        SC S     R   K P+S         +  H++   GCDPKYPRAACKHCGASY CDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSES++M  SFT
Subjt:  SCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSMMATSFT

Query:  QENCRTMFAKMKVKGFTNFAGIKSQ
        QENCR M A+M +     F  ++S+
Subjt:  QENCRTMFAKMKVKGFTNFAGIKSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACAACTAATAGAACATTTCTCAAATTGAAAGTTATCACCGATAAGGGTATAAAAAAATCGAATCGAACTGATGACCCGAATCGAACCAATTCAGTTCAGTTCGA
ATTGGGCCAGTTTCTAACAACAATAATTTTTTGTCTGCTCGCCTATTCGTGTATTTCGTCGCATTCCGTCTTCGTCTACTGCTCTGCATTTCGTTTTCGTGTACATTTCG
TTTTCACCACTTCATTTCTTCACTTCTTCCATTCTCTGTTCGTCATTTTGTCTTCGCCCCATACCCCTGACTGTTCGTCATTTCGTTTTCGCCCTTCGCCCTTTCGTTGT
CACTCGCCAGGATATGGCGTTGATACTGCCACTGAAAATAATGCCCAGACATATTGGAGCTGTGGCAGTATCAAATTCCATAATAGGAATGAGCCAAAGTTTCCTACCAG
TTGGGTTCTTATTGAACGTTTTCAATTCATCAGTAATCATTACATGTTTCGATCAGGATGTGATCCTAAATATCCTAGGGCTGCTTGTAAACATTGTGGGGCTTCCTATG
TTTGTGATTCCAAAAGAAATGGTACCACTAATTTAAAAAGACATTTAGAGAAATGTAAGATGTATGTAAATCCATTGGAAGATAATGTTGAAGGAGAGGGAGATTCTGAA
AGTAGTATGATGGCTACATCCTTCACTCAAGAAAATTGTAGAACAATGTTTGCTAAGATGAAAGTGAAGGGTTTCACCAATTTTGCGGGCATTAAATCCCAAGTTTATGA
TTCCATCAAGAGTAATCGTTGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAACAACTAATAGAACATTTCTCAAATTGAAAGTTATCACCGATAAGGGTATAAAAAAATCGAATCGAACTGATGACCCGAATCGAACCAATTCAGTTCAGTTCGA
ATTGGGCCAGTTTCTAACAACAATAATTTTTTGTCTGCTCGCCTATTCGTGTATTTCGTCGCATTCCGTCTTCGTCTACTGCTCTGCATTTCGTTTTCGTGTACATTTCG
TTTTCACCACTTCATTTCTTCACTTCTTCCATTCTCTGTTCGTCATTTTGTCTTCGCCCCATACCCCTGACTGTTCGTCATTTCGTTTTCGCCCTTCGCCCTTTCGTTGT
CACTCGCCAGGATATGGCGTTGATACTGCCACTGAAAATAATGCCCAGACATATTGGAGCTGTGGCAGTATCAAATTCCATAATAGGAATGAGCCAAAGTTTCCTACCAG
TTGGGTTCTTATTGAACGTTTTCAATTCATCAGTAATCATTACATGTTTCGATCAGGATGTGATCCTAAATATCCTAGGGCTGCTTGTAAACATTGTGGGGCTTCCTATG
TTTGTGATTCCAAAAGAAATGGTACCACTAATTTAAAAAGACATTTAGAGAAATGTAAGATGTATGTAAATCCATTGGAAGATAATGTTGAAGGAGAGGGAGATTCTGAA
AGTAGTATGATGGCTACATCCTTCACTCAAGAAAATTGTAGAACAATGTTTGCTAAGATGAAAGTGAAGGGTTTCACCAATTTTGCGGGCATTAAATCCCAAGTTTATGA
TTCCATCAAGAGTAATCGTTGCAAATGA
Protein sequenceShow/hide protein sequence
MITTNRTFLKLKVITDKGIKKSNRTDDPNRTNSVQFELGQFLTTIIFCLLAYSCISSHSVFVYCSAFRFRVHFVFTTSFLHFFHSLFVILSSPHTPDCSSFRFRPSPFRC
HSPGYGVDTATENNAQTYWSCGSIKFHNRNEPKFPTSWVLIERFQFISNHYMFRSGCDPKYPRAACKHCGASYVCDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSE
SSMMATSFTQENCRTMFAKMKVKGFTNFAGIKSQVYDSIKSNRCK