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MELO3C031842 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031842
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr06:22968266..22968473
RNA-Seq ExpressionMELO3C031842
SyntenyMELO3C031842
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process)
GO:1903730 - regulation of phosphatidate phosphatase activity (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038274.1 retrotransposon protein [Cucumis melo var. makuwa]5.9e-1779.03Show/hide
Query:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSD
        MSREDA+AAQVIEL+EAILNLTM EKS CV++VNQKVS++RSFIKMSD MK AYCR+ LG D
Subjt:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSD

KAA0046506.1 retrotransposon protein [Cucumis melo var. makuwa]9.5e-1569.84Show/hide
Query:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP
        ++REDA+ AQVIE M++I +LTM EKSKCV+IV +KVS++R+FIKMSDPMK+AYCRV LG DP
Subjt:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP

KAA0048148.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-1576.19Show/hide
Query:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP
        MS ED +AAQVIEL++AI NLTM EKSKCVM+VNQKVS++RSFIKM D MK AYCRV LG DP
Subjt:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP

TYJ98397.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-1379.66Show/hide
Query:  EDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSD
        EDA+AAQVIELMEAI NLTM EKSK +MIVNQKVS++RSFIKM D MK+AY RV LGSD
Subjt:  EDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSD

TYK28753.1 retrotransposon protein [Cucumis melo var. makuwa]9.5e-1569.84Show/hide
Query:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP
        ++REDA+ AQVIE M++I +LTM EKSKCV+IV +KVS++R+FIKMSDPMK+AYCRV LG DP
Subjt:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP

TrEMBL top hitse value%identityAlignment
A0A5A7T479 Retrotransposon protein2.9e-1779.03Show/hide
Query:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSD
        MSREDA+AAQVIEL+EAILNLTM EKS CV++VNQKVS++RSFIKMSD MK AYCR+ LG D
Subjt:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSD

A0A5A7TWZ4 Retrotransposon protein4.6e-1569.84Show/hide
Query:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP
        ++REDA+ AQVIE M++I +LTM EKSKCV+IV +KVS++R+FIKMSDPMK+AYCRV LG DP
Subjt:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP

A0A5A7TYU4 Retrotransposon protein5.4e-1676.19Show/hide
Query:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP
        MS ED +AAQVIEL++AI NLTM EKSKCVM+VNQKVS++RSFIKM D MK AYCRV LG DP
Subjt:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP

A0A5D3BGZ9 Retrotransposon protein5.1e-1479.66Show/hide
Query:  EDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSD
        EDA+AAQVIELMEAI NLTM EKSK +MIVNQKVS++RSFIKM D MK+AY RV LGSD
Subjt:  EDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSD

A0A5D3DYD1 Retrotransposon protein4.6e-1569.84Show/hide
Query:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP
        ++REDA+ AQVIE M++I +LTM EKSKCV+IV +KVS++R+FIKMSDPMK+AYCRV LG DP
Subjt:  MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGGGAGGACGCGATAGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCCTAAACCTTACTATGGTGGAGAAGAGTAAGTGCGTCATGATAGTGAATCAGAAGGT
GTCAATCATAAGAAGTTTTATCAAGATGTCTGATCCAATGAAGATTGCTTACTGCAGGGTCTTTCTTGGCAGTGACCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGAGAAAGCTATGAGTAGGGAGGACGCGATAGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCCTAAACCTTACTATGGTGGAGAAGAGTAAGTGCGTCATGA
TAGTGAATCAGAAGGTGTCAATCATAAGAAGTTTTATCAAGATGTCTGATCCAATGAAGATTGCTTACTGCAGGGTCTTTCTTGGCAGTGACCCGTGA
Protein sequenceShow/hide protein sequence
MSREDAIAAQVIELMEAILNLTMVEKSKCVMIVNQKVSIIRSFIKMSDPMKIAYCRVFLGSDP