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MELO3C031849 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031849
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr12:1926626..1926979
RNA-Seq ExpressionMELO3C031849
SyntenyMELO3C031849
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032891.1 putative E3 ubiquitin-protein ligase LIN-1 [Cucumis melo var. makuwa]1.1e-2198.36Show/hide
Query:  MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYL
        MISLIERKGQLS+VSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYL
Subjt:  MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYL

KAA0050439.1 putative E3 ubiquitin-protein ligase LIN-1 [Cucumis melo var. makuwa]7.7e-2092.31Show/hide
Query:  MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYLVLSR
        MISLIERKGQLSSVSIPQSL EALS MA+ASVTA WDSLR ETELVGSASTESRLPSSPYLVLSR
Subjt:  MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYLVLSR

KAA0062610.1 putative E3 ubiquitin-protein ligase LIN-1 [Cucumis melo var. makuwa]9.5e-1072.73Show/hide
Query:  ERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY
        + KG+ SSVSIP+SL EALSPMA A VT PWDS   E ELVGS STESRLPSS Y
Subjt:  ERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY

TYK29700.1 putative E3 ubiquitin-protein ligase LIN-1 [Cucumis melo var. makuwa]1.8e-0873.58Show/hide
Query:  KGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY
        KG+ SSVSIP+SL EALS MA A VT PWDS   E ELVGSAST+SRLPSS Y
Subjt:  KGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY

XP_016902915.1 PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Cucumis melo]2.7e-0467.44Show/hide
Query:  QSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY
        + + +ALSPMA A VT PWDS   E ELVGS STESRLPSS Y
Subjt:  QSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY

TrEMBL top hitse value%identityAlignment
A0A1S4E4L5 RING-type E3 ubiquitin transferase1.3e-0467.44Show/hide
Query:  QSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY
        + + +ALSPMA A VT PWDS   E ELVGS STESRLPSS Y
Subjt:  QSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY

A0A5A7STP1 Putative E3 ubiquitin-protein ligase LIN-15.2e-2298.36Show/hide
Query:  MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYL
        MISLIERKGQLS+VSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYL
Subjt:  MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYL

A0A5A7UAC3 Putative E3 ubiquitin-protein ligase LIN-13.7e-2092.31Show/hide
Query:  MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYLVLSR
        MISLIERKGQLSSVSIPQSL EALS MA+ASVTA WDSLR ETELVGSASTESRLPSSPYLVLSR
Subjt:  MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYLVLSR

A0A5A7V5V1 RING-type E3 ubiquitin transferase4.6e-1072.73Show/hide
Query:  ERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY
        + KG+ SSVSIP+SL EALSPMA A VT PWDS   E ELVGS STESRLPSS Y
Subjt:  ERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY

A0A5D3E2B9 RING-type E3 ubiquitin transferase8.7e-0973.58Show/hide
Query:  KGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY
        KG+ SSVSIP+SL EALS MA A VT PWDS   E ELVGSAST+SRLPSS Y
Subjt:  KGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCTCTAATAGAAAGAAAGGGTCAGCTCTCCTCTGTGTCTATTCCTCAGTCTTTGGCAGAGGCATTATCACCGATGGCTCACGCTTCTGTAACCGCTCCGTGGGA
CTCCTTACGCTCTGAGACTGAACTCGTTGGCTCCGCGTCCACCGAAAGTAGGTTACCTTCGTCACCGTATTTGGTACTCTCTCGATAG
mRNA sequenceShow/hide mRNA sequence
TCAAAATTCAATTCCTCTTTCTGAAAGGGGGCCTCTTCTTTGTTTAGAGGTTATCATATTGAGACCGATTCCATAAAATAGAGGGAGCCGTGCAAGAACGCGGGGATATA
GCAAGTAAGCAGCTCTCTCTTGTTGACCGTAGGCTTTATCTCGTGAATGATCTCTCTAATAGAAAGAAAGGGTCAGCTCTCCTCTGTGTCTATTCCTCAGTCTTTGGCAG
AGGCATTATCACCGATGGCTCACGCTTCTGTAACCGCTCCGTGGGACTCCTTACGCTCTGAGACTGAACTCGTTGGCTCCGCGTCCACCGAAAGTAGGTTACCTTCGTCA
CCGTATTTGGTACTCTCTCGATAG
Protein sequenceShow/hide protein sequence
MISLIERKGQLSSVSIPQSLAEALSPMAHASVTAPWDSLRSETELVGSASTESRLPSSPYLVLSR