CuGenDBv2

Gene ID	MELO3C031861
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Protein FAR1-RELATED SEQUENCE 4
Genome location	chr11:24469020..24469975
RNA-Seq Expression	MELO3C031861
Synteny	MELO3C031861
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035384.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]

4.4e-53

91.07

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MSTDRSI KEIVHKA TNLGVNISYQKAWR KEHMVKILH D VESYALIPRFFDKLVESNPSTCT LEM+DSGHFKFC MAFGASIEGWKYCR II+VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        GTFLKCKFGGIL
Subjt:  GTFLKCKFGGIL

KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

9.7e-53

89.29

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MST+RSI  EIVHKA TNLG+NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP TCT LEM+DSGHFKFC MAFGASIEGWKYC+PII VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        G FLKCKFGGIL
Subjt:  GTFLKCKFGGIL

KAA0041797.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]

3.3e-53

90.18

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MS DRSI KEIVHK  TNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP TCT LE++D GHFKFC MAFGASIEGWKYCRPII+VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        GTFLKCKFGGIL
Subjt:  GTFLKCKFGGIL

TYJ95626.1 uncharacterized protein E5676_scaffold104G00450 [Cucumis melo var. makuwa]

5.7e-53

90.18

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MS D SI KEIVHKA TNLGVNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SNP TCT LEM+DSGHFKFC MAFGASIEGWKYCRPII+VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        GTFLKCKFGGIL
Subjt:  GTFLKCKFGGIL

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

9.7e-53

89.29

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MST+RSI  EIVHKA TNLG+NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP TCT LEM+DSGHFKFC MAFGASIEGWKYC+PII VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        G FLKCKFGGIL
Subjt:  GTFLKCKFGGIL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 4

4.7e-53

89.29

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MST+RSI  EIVHKA TNLG+NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP TCT LEM+DSGHFKFC MAFGASIEGWKYC+PII VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        G FLKCKFGGIL
Subjt:  GTFLKCKFGGIL

A0A5A7TJB7 Protein FAR1-RELATED SEQUENCE 2-like

1.6e-53

90.18

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MS DRSI KEIVHK  TNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP TCT LE++D GHFKFC MAFGASIEGWKYCRPII+VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        GTFLKCKFGGIL
Subjt:  GTFLKCKFGGIL

A0A5D3B9S0 Uncharacterized protein

2.8e-53

90.18

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MS D SI KEIVHKA TNLGVNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SNP TCT LEM+DSGHFKFC MAFGASIEGWKYCRPII+VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        GTFLKCKFGGIL
Subjt:  GTFLKCKFGGIL

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 4

4.7e-53

89.29

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MST+RSI  EIVHKA TNLG+NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP TCT LEM+DSGHFKFC MAFGASIEGWKYC+PII VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        G FLKCKFGGIL
Subjt:  GTFLKCKFGGIL

A0A5D3BZ76 Protein FAR-RED IMPAIRED RESPONSE 1-like

2.1e-53

91.07

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Query:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD
        MSTDRSI KEIVHKA TNLGVNISYQKAWR KEHMVKILH D VESYALIPRFFDKLVESNPSTCT LEM+DSGHFKFC MAFGASIEGWKYCR II+VD
Subjt:  MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVD

Query:  GTFLKCKFGGIL
        GTFLKCKFGGIL
Subjt:  GTFLKCKFGGIL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

8.0e-05

31.33

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Query:  AKEHMVKILHGDTVESYALIPRFFDKLVESNPSTC-----TVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVDGTFLKCKF
        AK   +K   GD  +S+ LIP+    L  SN         ++    +   F+    AF  SI+G+++CRP+I VD   L  K+
Subjt:  AKEHMVKILHGDTVESYALIPRFFDKLVESNPSTC-----TVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVDGTFLKCKF

AT1G64255.1 MuDR family transposase

9.5e-06

30.85

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Query:  LGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCT-VLEMEDSGHF-KFC--LMAFGASIEGWKYCRPIIAVDGTFLKCKF
        +G  +       AKE  +K + GD  +S+   P+    L  SN        ++  + +F  FC    AF  SIEG+++CRP+I VD   L C++
Subjt:  LGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCT-VLEMEDSGHF-KFC--LMAFGASIEGWKYCRPIIAVDGTFLKCKF

AT1G64260.1 MuDR family transposase

3.6e-05

26.88

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Query:  GVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTC----TVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVDGTFLKCKF
        G  +   K    K  ++K + GD  +S+ ++P+       SN         +    D   F+    +F  SIEG+++CRP+I VD   L  K+
Subjt:  GVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTC----TVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVDGTFLKCKF

Sequences

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CDS sequence

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ATGTCTACTGATCGTTCCATTCATAAAGAGATTGTGCATAAGGCTCCTACAAATCTTGGAGTTAATATAAGTTACCAAAAAGCTTGGAGGGCAAAAGAACATATGGTAAA
GATATTACACGGTGACACAGTTGAATCGTATGCATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAAGTACATGCACTGTTTTAGAAATGGAGGATAGTG
GTCATTTCAAGTTTTGTCTTATGGCTTTCGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTGCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGC
ATCCTTAACAGCTTCATCACAAAATGGTAA

mRNA sequence

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TGTCACTGAATATAGGTTTTTCTGCTTCTGTTTCAAATGATGAAGTTATAAGAGACATCTCTTATCATTCTGATTTGAAGGAAAAAAAGTTTATTTGAAAGTAAAGAAGT
GCTTTCAAAGTGTTTTTGCATAATAGCAGTGAAGAACAACTTTCAATTTATGACTACAGTATTAAATTTGAGGTCTCTTAAATTTAGATGTCTGCAAGAAGGCTGCAAAT
GGTATGTAAGGGCAACTCGTTATAAGAGGAGTTATTTGTGGATGCTATGAAAGTACACTTCTGAGCATGATTGTTCATTAAGTACTACCCAAAGTTCTCACATATTCATG
TCTACTGATCGTTCCATTCATAAAGAGATTGTGCATAAGGCTCCTACAAATCTTGGAGTTAATATAAGTTACCAAAAAGCTTGGAGGGCAAAAGAACATATGGTAAAGAT
ATTACACGGTGACACAGTTGAATCGTATGCATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAAGTACATGCACTGTTTTAGAAATGGAGGATAGTGGTC
ATTTCAAGTTTTGTCTTATGGCTTTCGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTGCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATC
CTTAACAGCTTCATCACAAAATGGTAACAATCAAATCTTCCCACTTGCTTTTGCCATTGTAGATTCTAAAAATGATGCATCATGGACATGG

Protein sequence

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MSTDRSIHKEIVHKAPTNLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPSTCTVLEMEDSGHFKFCLMAFGASIEGWKYCRPIIAVDGTFLKCKFGG
ILNSFITKW

MELO3C031861 (gene) of Melon (DHL92) v4 genome