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MELO3C031862 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C031862
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionStructural maintenance of chromosomes protein 2-1-like
Genome locationchr06:8306839..8311114
RNA-Seq ExpressionMELO3C031862
SyntenyMELO3C031862
Gene Ontology termsGO:0007076 - mitotic chromosome condensation (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0000785 - chromatin (cellular component)
GO:0000793 - condensed chromosome (cellular component)
GO:0000796 - condensin complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050454.1 structural maintenance of chromosomes protein 2-1-like [Cucumis melo var. makuwa]3.0e-5681.21Show/hide
Query:  IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS-
        IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS 
Subjt:  IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS-

Query:  -----------------------------RIEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
                                      IEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
Subjt:  -----------------------------RIEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
KAA0067664.1 structural maintenance of chromosomes protein 2-1-like [Cucumis melo var. makuwa]1.0e-1686.67Show/hide
Query:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
        GHENEREKL++KMEAVIQEKASLEA+LVALK QVN+L+LEIEEQR KVFSIKSNN HAQS
Subjt:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
TYK03134.1 structural maintenance of chromosomes protein 2-1-like [Cucumis melo var. makuwa]1.8e-5378.18Show/hide
Query:  IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS-
        IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKL+IKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQ+ KVFSIKSNNGHAQSMEKLKTLEAQRS 
Subjt:  IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS-

Query:  -----------------------------RIEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
                                      IEVLRLKSIARAAKVA ILFCIGGVAIMAFYN PN
Subjt:  -----------------------------RIEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
XP_008439082.1 PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 2-1-like [Cucumis melo]1.0e-1686.67Show/hide
Query:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
        GHENEREKL++KMEAVIQEKASLEA+LVALK QVN+L+LEIEEQR KVFSIKSNN HAQS
Subjt:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
XP_038876915.1 structural maintenance of chromosomes protein 2-1-like [Benincasa hispida]1.0e-1685Show/hide
Query:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
        GHENEREKL++KMEAV+QEKASLEA+LVALK Q+N+LSLEIEEQR KVFSIKSNN HAQS
Subjt:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
TrEMBL top hitse value%identityAlignment
A0A0A0L9F1 Structural maintenance of chromosomes protein4.7e-1581.67Show/hide
Query:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
        GHENEREKL++KMEAVIQEKASLEA+LVALK QVN L+LEIEEQR KV  IK+NN HAQS
Subjt:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
A0A1S3AXY4 Structural maintenance of chromosomes protein5.0e-1786.67Show/hide
Query:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
        GHENEREKL++KMEAVIQEKASLEA+LVALK QVN+L+LEIEEQR KVFSIKSNN HAQS
Subjt:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
A0A5A7U5D9 Structural maintenance of chromosomes protein 2-1-like1.4e-5681.21Show/hide
Query:  IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS-
        IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS 
Subjt:  IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS-

Query:  -----------------------------RIEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
                                      IEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
Subjt:  -----------------------------RIEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
A0A5D3BVC1 Structural maintenance of chromosomes protein 2-1-like8.7e-5478.18Show/hide
Query:  IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS-
        IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKL+IKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQ+ KVFSIKSNNGHAQSMEKLKTLEAQRS 
Subjt:  IRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRS-

Query:  -----------------------------RIEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
                                      IEVLRLKSIARAAKVA ILFCIGGVAIMAFYN PN
Subjt:  -----------------------------RIEVLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN
A0A5D3DJK7 Structural maintenance of chromosomes protein5.0e-1786.67Show/hide
Query:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
        GHENEREKL++KMEAVIQEKASLEA+LVALK QVN+L+LEIEEQR KVFSIKSNN HAQS
Subjt:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQS
SwissProt top hitse value%identityAlignment
Q9C5Y4 Structural maintenance of chromosomes protein 2-12.2e-0642.03Show/hide
Query:  HENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQ
        HENE+EKL+++ EA+ QE++SLE+ L +L+ Q+++L+ E++EQR KV +++    H +S+ +LK + A+
Subjt:  HENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQ
Q9SN90 Structural maintenance of chromosomes protein 2-22.2e-0636.78Show/hide
Query:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRSRIEVLRLKSIARAAK
        GHEN RE+L+++ EAV QE++ L+++L +L+ Q+++L+ ++  QR KV +I+ +  H QS+ +LK + A+    +     SIA   K
Subjt:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRSRIEVLRLKSIARAAK
Arabidopsis top hitse value%identityAlignment
AT3G47460.1 Structural maintenance of chromosomes (SMC) family protein1.6e-0736.78Show/hide
Query:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRSRIEVLRLKSIARAAK
        GHEN RE+L+++ EAV QE++ L+++L +L+ Q+++L+ ++  QR KV +I+ +  H QS+ +LK + A+    +     SIA   K
Subjt:  GHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRSRIEVLRLKSIARAAK
AT5G62410.1 structural maintenance of chromosomes 21.6e-0742.03Show/hide
Query:  HENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQ
        HENE+EKL+++ EA+ QE++SLE+ L +L+ Q+++L+ E++EQR KV +++    H +S+ +LK + A+
Subjt:  HENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTTGGTTCTCAAGTCAGATCCGAAGTCGTGCCTCTGCTGGACGGTGGAGCTTCATGAACGATACGTTGACCCTGTCACTCAGCTTGGCGGCCCAGACAGGGCA
TGAAAATGAAAGGGAGAAGCTAATCATTAAAATGGAAGCTGTTATACAAGAGAAGGCATCATTAGAGGCTAAATTAGTTGCTTTGAAAATACAAGTTAACAGTCTAAGCT
TGGAAATAGAAGAACAGAGGACCAAGGTATTTTCTATAAAAAGTAATAATGGTCATGCTCAGTCTATGGAGAAACTTAAAACATTGGAGGCTCAACGATCCAGGATCGAG
GTGTTGAGGTTGAAGTCAATAGCAAGAGCTGCAAAGGTAGCAGGAATATTATTTTGCATTGGTGGTGTTGCGATAATGGCATTTTACAACGACCCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTTTGGTTCTCAAGTCAGATCCGAAGTCGTGCCTCTGCTGGACGGTGGAGCTTCATGAACGATACGTTGACCCTGTCACTCAGCTTGGCGGCCCAGACAGGGCA
TGAAAATGAAAGGGAGAAGCTAATCATTAAAATGGAAGCTGTTATACAAGAGAAGGCATCATTAGAGGCTAAATTAGTTGCTTTGAAAATACAAGTTAACAGTCTAAGCT
TGGAAATAGAAGAACAGAGGACCAAGGTATTTTCTATAAAAAGTAATAATGGTCATGCTCAGTCTATGGAGAAACTTAAAACATTGGAGGCTCAACGATCCAGGATCGAG
GTGTTGAGGTTGAAGTCAATAGCAAGAGCTGCAAAGGTAGCAGGAATATTATTTTGCATTGGTGGTGTTGCGATAATGGCATTTTACAACGACCCCAATTGAATTTGTTT
AACAATCACCATCATCTCTTTCCTATCCATAAACCTAATAATAATCACCATTCTTCTTCTCTTCCATTGCCCAATTCTTGGTTGATGGGTTGCTTTTTGATGCTATCTTC
CAATACCTTATGGAGTGTTTGGGTTGTTCTTCAGGTTTTTCCACAATCCATTGGAGCAATGAAGCCATATTTACGCCAATTCATTGATGTATAG
Protein sequenceShow/hide protein sequence
MLLWFSSQIRSRASAGRWSFMNDTLTLSLSLAAQTGHENEREKLIIKMEAVIQEKASLEAKLVALKIQVNSLSLEIEEQRTKVFSIKSNNGHAQSMEKLKTLEAQRSRIE
VLRLKSIARAAKVAGILFCIGGVAIMAFYNDPN