CuGenDBv2

Gene ID	MELO3C031876
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	homeobox-leucine zipper protein REVOLUTA-like
Genome location	chr06:26398778..26399981
RNA-Seq Expression	MELO3C031876
Synteny	MELO3C031876
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009855 - determination of bilateral symmetry (biological process) GO:0009944 - polarity specification of adaxial/abaxial axis (biological process) GO:0009956 - radial pattern formation (biological process) GO:0010014 - meristem initiation (biological process) GO:0010051 - xylem and phloem pattern formation (biological process) GO:0010089 - xylem development (biological process) GO:0030154 - cell differentiation (biological process) GO:0005634 - nucleus (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0008289 - lipid binding (molecular function)
InterPro domains	IPR044830 - Class III homeodomain-leucine zipper family

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0060694.1 revoluta [Cucumis melo var. makuwa]

7.9e-33

93.1

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Query:  MPQHSLRDASSPTG---LLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI
        MP HSLRDASSPTG   LLSIAEEILVAFLSKTTETAVNWDQMH MK GLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI
Subjt:  MPQHSLRDASSPTG---LLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI

KAG6586021.1 Homeobox-leucine zipper protein REVOLUTA, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-23

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQHSLRDASSP GLLSIAEEIL AFLSK T TA++W QM  MK G DSVGIFA+SQSCSGV A+ACGLV+LEPMK
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

KAG7020797.1 Homeobox-leucine zipper protein REVOLUTA [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-23

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQHSLRDASSP GLLSIAEEIL AFLSK T TA++W QM  MK G DSVGIFA+SQSCSGV A+ACGLV+LEPMK
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

TYK03299.1 revoluta [Cucumis melo var. makuwa]

1.2e-33

94.25

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Query:  MPQHSLRDASSPTG---LLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI
        MP HSLRDASSPTG   LLSIAEEILVAFLSKTTETAVNWDQMH MKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI
Subjt:  MPQHSLRDASSPTG---LLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI

XP_038894235.1 homeobox-leucine zipper protein REVOLUTA-like isoform X1 [Benincasa hispida]

1.9e-23

82.67

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQHSLRDASSP GLLSIAEEIL AFLSK T TAV+W QM  MK G DSVGIFAISQSCSGV A+ACGLV LEPMK
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7V060 Revoluta

3.8e-33

93.1

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Query:  MPQHSLRDASSPTG---LLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI
        MP HSLRDASSPTG   LLSIAEEILVAFLSKTTETAVNWDQMH MK GLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI
Subjt:  MPQHSLRDASSPTG---LLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI

A0A5D3BYZ8 Revoluta

5.9e-34

94.25

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Query:  MPQHSLRDASSPTG---LLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI
        MP HSLRDASSPTG   LLSIAEEILVAFLSKTTETAVNWDQMH MKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI
Subjt:  MPQHSLRDASSPTG---LLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI

A0A6J1FH70 homeobox-leucine zipper protein REVOLUTA-like isoform X2

1.2e-23

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQHSLRDASSP GLLSIAEEIL AFLSK T TA++W QM  MK G DSVGIFA+SQSCSGV A+ACGLV+LEPMK
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

A0A6J1FHZ3 homeobox-leucine zipper protein REVOLUTA-like isoform X1

1.2e-23

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQHSLRDASSP GLLSIAEEIL AFLSK T TA++W QM  MK G DSVGIFA+SQSCSGV A+ACGLV+LEPMK
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

A0A6J1I368 homeobox-leucine zipper protein REVOLUTA-like

2.7e-23

78.67

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQHSLRDASSP GLLSIAEEIL AFLSK T TA++W Q+  MK G DSVGIFA+SQSCSGV A+ACGLV+LEPMK
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

SwissProt top hits

e value

%identity

Alignment

A2XBL9 Homeobox-leucine zipper protein HOX10

5.5e-21

69.33

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQ+ LRDAS+P+GLLSIAEE L  FLSK T TA++W QM  MK G DSVGI AIS  C GV A+ACGLVNLEP K
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

A2Z8L4 Homeobox-leucine zipper protein HOX9

2.3e-19

65.33

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQ+ LRDAS+P+GLL+IAEE L  FLSK T TAV+W  M  MK G DS GI A+S  C GV A+ACGLVNLEP K
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

O04291 Homeobox-leucine zipper protein ATHB-14

1.9e-21

63.75

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI
        PQH  RDA++P GLLSIAEE L  FLSK T TAV+W QM  MK G DS+GI AIS++CSG+ A+ACGLV+LEPMK + ++
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI

Q6TAQ6 Homeobox-leucine zipper protein HOX10

5.5e-21

69.33

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQ+ LRDAS+P+GLLSIAEE L  FLSK T TA++W QM  MK G DSVGI AIS  C GV A+ACGLVNLEP K
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

Q9SE43 Homeobox-leucine zipper protein REVOLUTA

5.3e-24

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQHSLRDA+SP GLLSIAEE L  FLSK T TAV+W QM  MK G DSVGIFAISQ C+GV A+ACGLV+LEPMK
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

Arabidopsis top hits

e value

%identity

Alignment

AT1G30490.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

8.2e-20

58.23

Show/hide

Query:  QHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI
        QH  RD ++P  LLSIAEE L  FL K T TAV+W QM  MK G DS+GI A+S++CSG+ A+ACGLV+LEPMK + ++
Subjt:  QHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI

AT1G52150.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

2.6e-18

60.76

Show/hide

Query:  QHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI
        Q+  RDA SP GLLSIAEE L  FLSK T TAV W QM  MK G DS+GI AIS  C+GV A+ACGLV LEP + + ++
Subjt:  QHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI

AT2G34710.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

1.3e-22

63.75

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI
        PQH  RDA++P GLLSIAEE L  FLSK T TAV+W QM  MK G DS+GI AIS++CSG+ A+ACGLV+LEPMK + ++
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI

AT4G32880.1 homeobox gene 8

1.2e-18

57.5

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Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI
        PQH  RDA SP GLLSIA+E L  F+SK T TAV W QM  MK G DS+GI AIS  C+G+ A+ACGLV L+P + + ++
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLI

AT5G60690.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

3.8e-25

Show/hide

Query:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK
        PQHSLRDA+SP GLLSIAEE L  FLSK T TAV+W QM  MK G DSVGIFAISQ C+GV A+ACGLV+LEPMK
Subjt:  PQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMK

Sequences

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CDS sequence

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ATGCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTACTGGACTCTTGTCTATTGCAGAGGAGATTTTGGTAGCCTTCTTGTCAAAGACTACAGAAACTGCTGTCAATTG
GGATCAGATGCATTGGATGAAACTTGGTCTGGATTCGGTGGGAATCTTTGCCATTTCACAAAGTTGTAGTGGAGTGGTTGCACAAGCTTGTGGTCTTGTTAATTTAGAGC
CCATGAAGGAAAGCATGCTTATACTAATGATTTAG

mRNA sequence

Show/hide mRNA sequence

AAGGTCTCTGCCACTCTCTCCGCCACACACGACTTCTCTTTGCATCGCCAGCAGCTGGTTCGTGATTGCCCCATTTTAGCCAACATCAAACCCAAGCAGATTAAAGTCTA
GTTCCAAAACCGTAGATGTAGAGAGAAATAAAGAAAAGAGGCTTCTCGTTTACAGTTACTAAATAATAAATTGATGGCCATGGATAAACTGTTGATGGAGGAAAATGATA
GGTTGCAGAAGCAAGTGTCTCAGCTTGTCTGTGAGAATGGGTATATGCACCAAGATTTGCAATAAACTACTAATGAACCACCAGCAACAATTACTGATGCAAGTTGTGAC
TCAGGTTGTGACTCAGTGTCTACTATGCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTACTGGACTCTTGTCTATTGCAGAGGAGATTTTGGTAGCCTTCTTGTCAAA
GACTACAGAAACTGCTGTCAATTGGGATCAGATGCATTGGATGAAACTTGGTCTGGATTCGGTGGGAATCTTTGCCATTTCACAAAGTTGTAGTGGAGTGGTTGCACAAG
CTTGTGGTCTTGTTAATTTAGAGCCCATGAAGGAAAGCATGCTTATACTAATGATTTAG

Protein sequence

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MPQHSLRDASSPTGLLSIAEEILVAFLSKTTETAVNWDQMHWMKLGLDSVGIFAISQSCSGVVAQACGLVNLEPMKESMLILMI

MELO3C031876 (gene) of Melon (DHL92) v4 genome