CuGenDBv2

Gene ID	MELO3C031909
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	reactive Intermediate Deaminase A, chloroplastic-like
Genome location	chr06:29443506..29445478
RNA-Seq Expression	MELO3C031909
Synteny	MELO3C031909
Gene Ontology terms	GO:1901565 - organonitrogen compound catabolic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0005829 - cytosol (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0019239 - deaminase activity (molecular function)
InterPro domains	IPR006175 - YjgF/YER057c/UK114 family IPR019897 - RidA, conserved site IPR035959 - RutC-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033984.1 reactive Intermediate Deaminase A [Cucumis melo var. makuwa]

2.4e-53

83.45

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

KAG7031418.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-53

81.82

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD++E QTEQVLKNMGEILKAGGA YSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYDFPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIYDFPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYDFPSPAPARSTYQVAALPLDAKVEIECIATL

XP_008463412.1 PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo]

2.4e-53

83.45

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

XP_022976324.1 reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima]

2.2e-51

80.69

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD++E QTEQVLKNMGEILKAGGASYSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

XP_038903207.1 reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida]

7.7e-52

81.38

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAVQTDKAPAALGPYSQAIKANNLLFVSG LGLNPETGKFVSD+VEDQTEQVLKNMGEILKAGGASYSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSP+PARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2Z6 Uncharacterized protein

1.1e-51

80.69

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNMGEILKAGG+SYSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSPAPARSTY+VA LPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

A0A1S3CJ54 reactive Intermediate Deaminase A, chloroplastic-like

1.2e-53

83.45

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

A0A5D3BS36 Reactive Intermediate Deaminase A

1.2e-53

83.45

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

A0A6J1FUT7 reactive Intermediate Deaminase A, chloroplastic

3.1e-51

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD++E QTEQVLKNMGEILKAGGA YSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

A0A6J1IN69 reactive Intermediate Deaminase A, chloroplastic

1.1e-51

80.69

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        IKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD++E QTEQVLKNMGEILKAGGASYSSVVKTTI+                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        DLKDFKKVNEIY   FPSPAPARSTYQVAALPLDAKVEIECIATL
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

SwissProt top hits

e value

%identity

Alignment

P52758 2-iminobutanoate/2-iminopropanoate deaminase

4.0e-27

44.06

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        I+  + T KAP A+GPYSQA+  +  +++SG +G++P +G+ VS  V ++ +Q LKNMGEILKA G  +++VVKTT++                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIA
        D+ DF  VNEIY   F S  PAR+ YQVAALP  +++EIE +A
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIA

P52759 2-iminobutanoate/2-iminopropanoate deaminase

9.8e-26

43.36

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        I++ + T KAPAA+G YSQA+  +  ++VSG +G++P +G+ V   V ++ +Q LKN+GEILKA G  +++VVKTT++                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIA
        D+ DF  VNEIY   F    PAR+ YQVAALP  +++EIE IA
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIA

P52760 2-iminobutanoate/2-iminopropanoate deaminase

5.2e-27

44.76

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Query:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA
        I++ + T KAPAA+GPYSQA++ +  +++SG +GL+P +G+ V   V ++ +Q LKN+GEILKA G  +++VVKTT++                    LA
Subjt:  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLA

Query:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIA
        D+ DF  VNEIY   F    PAR+ YQVAALP  ++VEIE IA
Subjt:  DLKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIA

Q10121 RutC family protein C23G10.2

7.5e-26

45.07

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Query:  KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLAD
        ++ + +  AP A+GPYSQA++A N +++SG LGL+P+TG  + + V +QT Q LKN+GE+LKA GA Y +VVKTT++                    L +
Subjt:  KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLAD

Query:  LKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIA
        + DF  VNE+Y   F SP PAR+ YQVAALP    VEIE +A
Subjt:  LKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIA

Q94JQ4 Reactive Intermediate Deaminase A, chloroplastic

2.7e-47

72.22

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Query:  KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLAD
        KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS++VEDQTEQVLKNMGEILKA GA YSSVVKTTI+                    LAD
Subjt:  KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLAD

Query:  LKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        L DFK VNEIY   FP+P+PARSTYQVAALPL+AK+EIECIATL
Subjt:  LKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

Arabidopsis top hits

e value

%identity

Alignment

AT3G04480.1 endoribonucleases

6.4e-04

35.48

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Query:  APAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSS
        AP+ +GPYSQA    ++L ++G LGL+P T    ++    +  Q L N   I ++   S SS
Subjt:  APAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSS

AT3G20390.1 endoribonuclease L-PSP family protein

1.9e-48

72.22

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Query:  KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLAD
        KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS++VEDQTEQVLKNMGEILKA GA YSSVVKTTI+                    LAD
Subjt:  KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLAD

Query:  LKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL
        L DFK VNEIY   FP+P+PARSTYQVAALPL+AK+EIECIATL
Subjt:  LKDFKKVNEIYD--FPSPAPARSTYQVAALPLDAKVEIECIATL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GAAGGTATCAAGGAAGCTGTTCAGACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTA
GGTCTAAATCCTGAGACAGGGAAATTTGTCTCAGATAACGTTGAAGACCAAACGGAGCAGGTCCTGAAAAATATGGGCGAAATATTGAAAGCTGGAGGTGCCAGC
TATTCTTCTGTGGTTAAGACGACTATTATAAAGTCGACAAAATATACCTTTTGCCGTTTTACTCGATGGGTAGATGTTGGCGTGAATAAGTTGGCTGATCTGAAG
GATTTCAAGAAAGTTAACGAGATATATGATTTTCCGTCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTCGAAATTGAA
TGCATCGCTACACTTTGA

mRNA sequence

Show/hide mRNA sequence

TGGAAGGTATCAAGGAAGCTGTTCAGACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCC
TAGGTCTAAATCCTGAGACAGGGAAATTTGTCTCAGATAACGTTGAAGACCAAACGGAGCAGGTCCTGAAAAATATGGGCGAAATATTGAAAGCTGGAGGTGCCA
GCTATTCTTCTGTGGTTAAGACGACTATTATAAAGTCGACAAAATATACCTTTTGCCGTTTTACTCGATGGGTAGATGTTGGCGTGAATAAGTTGGCTGATCTGA
AGGATTTCAAGAAAGTTAACGAGATATATGATTTTCCGTCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTCGAAATTG
AATGCATCGCTACACTTTGAAGGCCTCTGACCTAATTTCAGGTACCCCAGTTTTCAAGACAGAGTAAATTAATAAAATGGAGATATCAATCACAGCACAG

Protein sequence

Show/hide protein sequence

EGIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLK
DFKKVNEIYDFPSPAPARSTYQVAALPLDAKVEIECIATL

MELO3C031909 (gene) of Melon (DHL92) v4 genome