; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C032008 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032008
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr06:12572234..12574095
RNA-Seq ExpressionMELO3C032008
SyntenyMELO3C032008
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033561.1 uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa]5.3e-5584.96Show/hide
Query:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRR--YRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS
        CA+AYTVEEFEYHMRC++SV SNI+DYLSSVG +KWSR YSRR  YRMMTSNC ES++SVFKDLREL VATMLCSIRDVLQKWFY RSK ASTMK+HLTS
Subjt:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRR--YRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS

Query:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQ
        W ENIL LEHEKSRRLLVDPISTTEYQV DGNQ
Subjt:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQ

KAA0037108.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]2.7e-5985.31Show/hide
Query:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYS--RRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS
        CA+AY VEEFEYH RCM+SV  NIRDYLSSVG +KWSR YS  RRYR+MTSNC ESVNSVFKDLREL VATMLCSIRDVLQKWFYERSK ASTMKS+LT 
Subjt:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYS--RRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS

Query:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGC
        W ENILRLEHEKSRRLLVDPISTTEYQV D NQQFIVKLNV C
Subjt:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGC

KAA0062291.1 hypothetical protein E6C27_scaffold154G00320 [Cucumis melo var. makuwa]4.1e-5562.76Show/hide
Query:  AHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTSWVE
        A   ++E ++Y    +    + ++ YLSSVG +KWSRAYS R                                         RSK ASTMKSHLTSW E
Subjt:  AHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTSWVE

Query:  NILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSHFD
        NILRLE EKSRRLLVDPISTTEYQV DGNQQFIVKLNVGCCSC+VWDIEEIPCAHALAVLRMLNLDTYSYVS+FYYRETLSATYNGC QPVGSHFD
Subjt:  NILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSHFD

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]2.0e-5756.35Show/hide
Query:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYS--RRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS
        CA +YT+++FE++MR ++S+  NIR YL +VG KKWSRAYS  RRY MMT+N  E VN V K+ R L VA++L +IR +LQKWF++R K + +M + LT 
Subjt:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYS--RRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS

Query:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSH
        W ENIL  +HE+SR  ++ PI   EY VMDG++QF+VKLN   CS QVWD EEIPC+H L VLR+LN+D YSY+S +YY   LS TY GC++PVG H
Subjt:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSH

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]3.7e-5654.77Show/hide
Query:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSR--RYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS
        CA AYT++ FE +M+ M+S+Y +IR+YLS VG +KW+RAYSR  RYRMMT+N  ES++SV ++ RE  +A++L SIR +LQ WFYERSK AS+MK+ LTS
Subjt:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSR--RYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS

Query:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSHFD
        W EN LR +H +SR   VD I+  EY+V+DG+  ++V +    CSC  WD+EEIPCAHA AVL  LNLD+Y++VS++Y+  T S+TY   I P+G+H D
Subjt:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSHFD

TrEMBL top hitse value%identityAlignment
A0A5A7SVW4 Uncharacterized protein2.6e-5584.96Show/hide
Query:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRR--YRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS
        CA+AYTVEEFEYHMRC++SV SNI+DYLSSVG +KWSR YSRR  YRMMTSNC ES++SVFKDLREL VATMLCSIRDVLQKWFY RSK ASTMK+HLTS
Subjt:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRR--YRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS

Query:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQ
        W ENIL LEHEKSRRLLVDPISTTEYQV DGNQ
Subjt:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQ

A0A5A7T2U4 Protein FAR1-RELATED SEQUENCE 4-like1.3e-5985.31Show/hide
Query:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYS--RRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS
        CA+AY VEEFEYH RCM+SV  NIRDYLSSVG +KWSR YS  RRYR+MTSNC ESVNSVFKDLREL VATMLCSIRDVLQKWFYERSK ASTMKS+LT 
Subjt:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYS--RRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS

Query:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGC
        W ENILRLEHEKSRRLLVDPISTTEYQV D NQQFIVKLNV C
Subjt:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGC

A0A5A7V9D5 SWIM-type domain-containing protein2.0e-5562.76Show/hide
Query:  AHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTSWVE
        A   ++E ++Y    +    + ++ YLSSVG +KWSRAYS R                                         RSK ASTMKSHLTSW E
Subjt:  AHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTSWVE

Query:  NILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSHFD
        NILRLE EKSRRLLVDPISTTEYQV DGNQQFIVKLNVGCCSC+VWDIEEIPCAHALAVLRMLNLDTYSYVS+FYYRETLSATYNGC QPVGSHFD
Subjt:  NILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSHFD

A0A5D3B9S0 Uncharacterized protein2.6e-5584.96Show/hide
Query:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRR--YRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS
        CA+AYTVEEFEYHMRC++SV SNI+DYLSSVG +KWSR YSRR  YRMMTSNC ES++SVFKDLREL VATMLCSIRDVLQKWFY RSK ASTMK+HLTS
Subjt:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRR--YRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS

Query:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQ
        W ENIL LEHEKSRRLLVDPISTTEYQV DGNQ
Subjt:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQ

A0A5D3DJR8 MuDR family transposase4.4e-5553.81Show/hide
Query:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAY--SRRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS
        C  AYTV +FE +MR M+S+Y +IRDYLS V  +KW+RAY   +RY+MMT+N  ES+N+V K+ R+L VA +L SIR +LQ WFY+R K A  M++ LTS
Subjt:  CAHAYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAY--SRRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTS

Query:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSH
        W E  LR++H+ SR   V+ I+  E+QV+DG +QFIV+L+   C+C+VWD++EIPCAHALAVLR  N++TYS+VS+++   TL +TY G ++PVG+H
Subjt:  WVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase7.5e-0723.53Show/hide
Query:  EEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYS-------------------RRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKT
        EEF+ +M  +K        +L  +   KW+ A+                    R +   T      V  +F +LR  F  + L SI   L +        
Subjt:  EEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYS-------------------RRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKT

Query:  ASTMKSHLTSWVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGC
           ++  +T  +  ++        +L  D    +E       +++IV+LNV  C+C+ +   + PC HALAV   L ++   YV E Y  E    TY   
Subjt:  ASTMKSHLTSWVENILRLEHEKSRRLLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGC

Query:  IQPV
          PV
Subjt:  IQPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCATGTGACTTCGCGGAGCTTTCCATTGATTACATGACTGAGATATTGAGCCTGAGAATATATGGTACCGTGTGCACACATGTTATATTTCCGTTGTTGACGTT
GAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGTGGGCCCCACTACGACAAAGAAGGAAGTGTCGGGCGGGCCCCACTACATCATTGGTATGTTTATCGGGCT
TAACGTTCAGTAAGGGTCACCAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTTGAGCTAAGACAGCAGGTGGTCCGGGAGGGGGTCTGTGCTCAT
GCCTATACTGTTGAAGAATTTGAGTACCACATGAGATGCATGAAGTCTGTTTATTCAAATATTAGAGATTATCTTAGTAGTGTTGGTTCTAAGAAGTGGTCTCGGGCATA
TTCACGTAGGTATAGAATGATGACATCAAATTGTGTAGAAAGTGTAAATTCTGTGTTTAAAGATCTTAGAGAACTCTTTGTGGCAACGATGCTTTGTTCAATTAGGGACG
TATTGCAAAAGTGGTTTTATGAACGAAGTAAAACTGCTTCTACAATGAAGAGTCATTTGACTTCTTGGGTTGAGAACATTCTACGTTTAGAACATGAAAAGTCGAGAAGA
TTATTGGTTGATCCAATAAGTACAACTGAATACCAAGTAATGGATGGAAATCAACAGTTTATTGTGAAGTTAAACGTGGGATGTTGTAGTTGCCAAGTATGGGATATTGA
AGAAATTCCTTGTGCACATGCTCTTGCCGTTCTACGAATGCTTAATTTAGATACCTATTCTTATGTATCTGAGTTTTATTATAGAGAAACACTATCAGCAACATACAATG
GTTGTATCCAACCTGTTGGATCTCATTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCATGTGACTTCGCGGAGCTTTCCATTGATTACATGACTGAGATATTGAGCCTGAGAATATATGGTACCGTGTGCACACATGTTATATTTCCGTTGTTGACGTT
GAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGTGGGCCCCACTACGACAAAGAAGGAAGTGTCGGGCGGGCCCCACTACATCATTGGTATGTTTATCGGGCT
TAACGTTCAGTAAGGGTCACCAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTTGAGCTAAGACAGCAGGTGGTCCGGGAGGGGGTCTGTGCTCAT
GCCTATACTGTTGAAGAATTTGAGTACCACATGAGATGCATGAAGTCTGTTTATTCAAATATTAGAGATTATCTTAGTAGTGTTGGTTCTAAGAAGTGGTCTCGGGCATA
TTCACGTAGGTATAGAATGATGACATCAAATTGTGTAGAAAGTGTAAATTCTGTGTTTAAAGATCTTAGAGAACTCTTTGTGGCAACGATGCTTTGTTCAATTAGGGACG
TATTGCAAAAGTGGTTTTATGAACGAAGTAAAACTGCTTCTACAATGAAGAGTCATTTGACTTCTTGGGTTGAGAACATTCTACGTTTAGAACATGAAAAGTCGAGAAGA
TTATTGGTTGATCCAATAAGTACAACTGAATACCAAGTAATGGATGGAAATCAACAGTTTATTGTGAAGTTAAACGTGGGATGTTGTAGTTGCCAAGTATGGGATATTGA
AGAAATTCCTTGTGCACATGCTCTTGCCGTTCTACGAATGCTTAATTTAGATACCTATTCTTATGTATCTGAGTTTTATTATAGAGAAACACTATCAGCAACATACAATG
GTTGTATCCAACCTGTTGGATCTCATTTTGATTAGAGAGTTTTAGATTCTGTTATGAAAATGAAGGAATGGAATTCCTAAAGCGGAAGCGTGTGAACGCCGTGCAAGTGA
AATTCAATTTATGAAACCAATAAATTCAAAGTAAAATAATAAACATGCTTCTCATGGAGAAAAAGGTGAAAATAAACTGACCTTTGTAGAACCAAT
Protein sequenceShow/hide protein sequence
MFSCDFAELSIDYMTEILSLRIYGTVCTHVIFPLLTLSVLRDNDAVVSAGWAPLRQRRKCRAGPTTSLVCLSGLTFSKGHQGSLEETMSVGFTPSFELRQQVVREGVCAH
AYTVEEFEYHMRCMKSVYSNIRDYLSSVGSKKWSRAYSRRYRMMTSNCVESVNSVFKDLRELFVATMLCSIRDVLQKWFYERSKTASTMKSHLTSWVENILRLEHEKSRR
LLVDPISTTEYQVMDGNQQFIVKLNVGCCSCQVWDIEEIPCAHALAVLRMLNLDTYSYVSEFYYRETLSATYNGCIQPVGSHFD