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MELO3C032012.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C032012.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein Ycf2-like
Genome locationchr06:13675611..13680333
RNA-Seq ExpressionMELO3C032012.jh1
SyntenyMELO3C032012.jh1
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033297.1 protein Ycf2-like [Cucumis melo var. makuwa]2.80e-3873.33Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MK+G+G++KTRTSDRL+  GITGSRKSL TGIQNLSSSSE+    R E+IM EGSGGK+ESPGTSKKRVRT+TKKEE TV KKQRIK LV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EEKNK
        +++ K
Subjt:  EEKNK
KAA0067175.1 protein Ycf2-like [Cucumis melo var. makuwa]2.05e-3679.41Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MKKG+G++KTRTSDRL+  GITGSRKSL TGIQNLSSSSE+    R E+IM EGSGGKRESPGTSKKRVRTETKKEE TVQKKQRIKSLV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EE
        ++
Subjt:  EE
KAA0067554.1 protein Ycf2-like [Cucumis melo var. makuwa]2.52e-3778.43Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MKKG+G++KTRTSDRL+   ITGSRKSL TGIQNLSSSSE+    R E+IM EGSGGKRESPGTSKKRVRTETKKEE TVQKKQRIKSLV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EE
        ++
Subjt:  EE
TYJ97200.1 protein Ycf2-like [Cucumis melo var. makuwa]3.57e-3777.45Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MK+G+G++KTRTSDRL+   ITGSRKSL TGIQNLSSSSE+    R E+IM EGSGGKRESPGTSKKRVRTETKKEE TVQKKQRIKSLV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EE
        ++
Subjt:  EE
TYK28605.1 protein Ycf2-like [Cucumis melo var. makuwa]1.30e-4179.25Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MKKGKG++KTRTSDRL+  GITGSRKSLATGIQNL SSSE+    R E+IM EGSGGKRESPGTSKKRVRTETKKEE TVQKKQ+IKSLV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EEKNKK
        E K +K
Subjt:  EEKNKK
TrEMBL top hitse value%identityAlignment
A0A5A7SVE9 Protein Ycf2-like1.36e-3873.33Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MK+G+G++KTRTSDRL+  GITGSRKSL TGIQNLSSSSE+    R E+IM EGSGGK+ESPGTSKKRVRT+TKKEE TV KKQRIK LV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EEKNK
        +++ K
Subjt:  EEKNK
A0A5A7VJM3 Protein Ycf2-like1.22e-3778.43Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MKKG+G++KTRTSDRL+   ITGSRKSL TGIQNLSSSSE+    R E+IM EGSGGKRESPGTSKKRVRTETKKEE TVQKKQRIKSLV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EE
        ++
Subjt:  EE
A0A5A7VN68 Protein Ycf2-like9.92e-3779.41Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MKKG+G++KTRTSDRL+  GITGSRKSL TGIQNLSSSSE+    R E+IM EGSGGKRESPGTSKKRVRTETKKEE TVQKKQRIKSLV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EE
        ++
Subjt:  EE
A0A5D3BBJ1 Protein Ycf2-like1.73e-3777.45Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MK+G+G++KTRTSDRL+   ITGSRKSL TGIQNLSSSSE+    R E+IM EGSGGKRESPGTSKKRVRTETKKEE TVQKKQRIKSLV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EE
        ++
Subjt:  EE
A0A5D3DZ37 Protein Ycf2-like6.31e-4279.25Show/hide
Query:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG
        MKKGKG++KTRTSDRL+  GITGSRKSLATGIQNL SSSE+    R E+IM EGSGGKRESPGTSKKRVRTETKKEE TVQKKQ+IKSLV R++VYRGKG
Subjt:  MKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRESPGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKG

Query:  EEKNKK
        E K +K
Subjt:  EEKNKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCACTCCACATCTCCAATAAAACCCTAGAACTTCCGTTTTTTAAAAACTTCTTGGCGCATTTCCACCCTCGCGTCCTTTTCTGTTTTTCCACCGTAGCT
TCGTCTTCCGTTTTTCCACAGTGGCTTTCTCTTCCGTCGCTTTTCCACAGTCGATTTGTCTTCCATCGTTACTTTTCCACTGTCGGTTTTCCGTCGTCTGCACGC
CTTTCATTTTTTAATCGGTTTGCACCCCCCATTATGCAAAGTATCGGTGAGTTGTTTCGTTTCACGCTTCTGTTCCTTCTTCAACCTTTGAATTCTTGCTCTGTT
TTCTGCCTGTATCGTTTTAAGATTCTTGAAACTTTCAAATGGCTTTCCACCCGCACCGTCGCTTTGCACCTTTTTCTTTTAGTACAAATTTTCAAATTGCTTTCA
AATGGCATAGAAAGTCATAATATAAAGATGAAAAAGGGAAAGGGAGATGTCAAAACAAGAACAAGTGATCGGTTAAAAGTCGTGGGGATCACTGGTTCTAGAAAA
TCATTGGCAACTGGAATTCAAAATCTATCGAGTTCTTCTGAGGATGTACAAATGCATAGAATAGAAAATATCATGGGAGAAGGCTCCGGGGGTAAGAGGGAGAGT
CCAGGAACTTCAAAAAAGAGGGTGAGGACTGAAACGAAAAAAGAGGAGGTCACTGTCCAGAAGAAACAACGGATTAAAAGTTTGGTTTTGAGGAGGCAAGTTTAT
AGAGGGAAAGGTGAAGAAAAAAACAAAAAGAGGTTGAAGGAAAGGTATAAAGTCAAACATTTGTTATGGATGAATTATGTATTGTTAAATTCATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAACCACTCCACATCTCCAATAAAACCCTAGAACTTCCGTTTTTTAAAAACTTCTTGGCGCATTTCCACCCTCGCGTCCTTTTCTGTTTTTCCACCGTAGCT
TCGTCTTCCGTTTTTCCACAGTGGCTTTCTCTTCCGTCGCTTTTCCACAGTCGATTTGTCTTCCATCGTTACTTTTCCACTGTCGGTTTTCCGTCGTCTGCACGC
CTTTCATTTTTTAATCGGTTTGCACCCCCCATTATGCAAAGTATCGGTGAGTTGTTTCGTTTCACGCTTCTGTTCCTTCTTCAACCTTTGAATTCTTGCTCTGTT
TTCTGCCTGTATCGTTTTAAGATTCTTGAAACTTTCAAATGGCTTTCCACCCGCACCGTCGCTTTGCACCTTTTTCTTTTAGTACAAATTTTCAAATTGCTTTCA
AATGGCATAGAAAGTCATAATATAAAGATGAAAAAGGGAAAGGGAGATGTCAAAACAAGAACAAGTGATCGGTTAAAAGTCGTGGGGATCACTGGTTCTAGAAAA
TCATTGGCAACTGGAATTCAAAATCTATCGAGTTCTTCTGAGGATGTACAAATGCATAGAATAGAAAATATCATGGGAGAAGGCTCCGGGGGTAAGAGGGAGAGT
CCAGGAACTTCAAAAAAGAGGGTGAGGACTGAAACGAAAAAAGAGGAGGTCACTGTCCAGAAGAAACAACGGATTAAAAGTTTGGTTTTGAGGAGGCAAGTTTAT
AGAGGGAAAGGTGAAGAAAAAAACAAAAAGAGGTTGAAGGAAAGGTATAAAGTCAAACATTTGTTATGGATGAATTATGTATTGTTAAATTCATTGTAAATTTGA
CAAACGAGGATACGGAAAGCGAAAGCGAAAAGGAGGACAAAGTACATGAAGATGAAGAAGTAGAAGAAGATGAACAAGCTGAAGATCAAGAAGATGAAGAAAAAC
AATATAAAGAAAAACGGGATGAAGAAGAGGAAGGCGAGACCACCGTGGGTGAAGATTCGAATTCATCGACGAGTGAAATACCACCAGATACTAAGAAAAGGAAGA
AGACTGGAGAAAAAGGAAAGAAAGTGAAGGCTATTAAAAAAGAAGAAAAGGCAACAGAAGATAGAAGGAGAAAGGGAAAAGCCCCGATGAATCCGAAAAAATCTG
AGAAGTTAACATACATCTACCATGCGATGAACCTAAACGAAGAGAGAGGAAGGTAAACGATGTACTTACCTTTGTAGATCTCAACCTCTTCTTTGGTCCAAAACT
TCTTCTCTTCCTGAAAATCACGAGCAAGAACAACCACTAAGCCGACCTACTATGCTCAGGACCAAGAACGGAGTTGTAGGACTCGGTTATGCGAAGAGAAGAGAT
GGGAGTCAATCATTTAGTACTGCTGGAACTGATGATGATAGGATAAAAATAGCCAAACTGTACTTTCTGGAGAGTTTTTTGATCCCTAAGCAAGAATTTCTAAGT
GTAGATTGGGATCATATCATTATGGTAGATGATGATAAAGTATTTGATGGGTACTCGTGGGATAGAGTTGCTTTTGAACTCTTAGTGGACTTCATGAATACGGCC
ATTTGTAGCAAGGGGCAAATGGGTATTTCGATTGGGGGGGTTTATTTTTCCCATTCTTGTTTGGGCTTACGAGGTAATCCCAACATTAAGTACTCCGCCCAACTT
CTTTGCAACAAGGATTTTCAATGA
Protein sequenceShow/hide protein sequence
MQPLHISNKTLELPFFKNFLAHFHPRVLFCFSTVASSSVFPQWLSLPSLFHSRFVFHRYFSTVGFPSSARLSFFNRFAPPIMQSIGELFRFTLLFLLQPLNSCSV
FCLYRFKILETFKWLSTRTVALHLFLLVQIFKLLSNGIESHNIKMKKGKGDVKTRTSDRLKVVGITGSRKSLATGIQNLSSSSEDVQMHRIENIMGEGSGGKRES
PGTSKKRVRTETKKEEVTVQKKQRIKSLVLRRQVYRGKGEEKNKKRLKERYKVKHLLWMNYVLLNSL