; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C032018 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032018
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:13179232..13181916
RNA-Seq ExpressionMELO3C032018
SyntenyMELO3C032018
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034110.1 uncharacterized protein E6C27_scaffold65G001000 [Cucumis melo var. makuwa]8.8e-18880.49Show/hide
Query:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT
        MIS MQLDESR Q EPP +EILLGALEKP ETVPKDT+ VPEKCHGVMPS WPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTP ELARLRKPSKMLWNT
Subjt:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT

Query:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL
        GFCRSVQAPYGAHVPALKKRDRSPQQHIDR TQSKL+VRRKCPLPMLTRR D P GVKHLPKSD RP+QCRVRTT+AKGLEK+ V+RHE YEFP+ PL L
Subjt:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL

Query:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK
        TDAKGGKCCSVQGQ+S L HVGE HQGGSSREEDTQW ENL+C++AFNGSKQ +IEGPSLGAVDATKTPEV+AEQ SCVL E+LHHCVD RQKNWVQ  K
Subjt:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK

Query:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI
        V QFGHSAQTDSPSKRSPFEI+DKRH VL P+ADGP++ D PQVHR  EE EQMA+IARVCLEE S+PMEE  D++RCPLE E  T LP +G       +
Subjt:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI

Query:  SAFSY
        S +++
Subjt:  SAFSY

KAA0046992.1 uncharacterized protein E6C27_scaffold230G001810 [Cucumis melo var. makuwa]7.7e-19271.87Show/hide
Query:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT
        MISAMQLDESR Q+EPP +EILLG LEKP ETVP+DT  VP+K HGVMPSSWPK SS RRRTDH ++ PSEAKAHAKNAYRM P EL RLRKPS++L NT
Subjt:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT

Query:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL
        G    VQAPYGA V +LKK+DRSPQQ +DR TQSKLTVRRKCP PMLTR+ DCPRGVKHLPKSDDRP+QCRVRTT+AKGLEKHYVSRHE Y+FPVVPLSL
Subjt:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL

Query:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK
        TDAKGGKCC VQ QMSVLSHVGECHQGGSSREEDTQW ENL+CQ+AFNGSKQAMIEGPSLG VDATKTPEVEAEQ S VL EYLHHCVD RQKNWVQLL+
Subjt:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK

Query:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI
        V QF HSAQTDS  KRSPFEIK KRH VL P+AD PYV D PQVHR  EE EQMA+IARVCLEEAS+PMEE  D++R PLE E  TKLP +        +
Subjt:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI

Query:  SAFSYASLPRPKFSICTIV--------------------------GRLRHTASLSADSDYRTTDLLIELSKCRTIVLRSYDCDIEHS
        S +++  + + K  + T +                          GRLRHT SLSADS++RT DLLIELSKCRTIVLRSYDCD + +
Subjt:  SAFSYASLPRPKFSICTIV--------------------------GRLRHTASLSADSDYRTTDLLIELSKCRTIVLRSYDCDIEHS

KAA0047382.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]2.2e-23197.26Show/hide
Query:  MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR
        MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR
Subjt:  MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR

Query:  SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK
        SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK
Subjt:  SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK

Query:  GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF
        GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF
Subjt:  GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF

Query:  GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFS
        GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNG   S   +S ++
Subjt:  GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFS

Query:  Y
        +
Subjt:  Y

KAA0057593.1 reverse transcriptase [Cucumis melo var. makuwa]7.0e-18580.74Show/hide
Query:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT
        MISAMQLDESR Q+EPP +EILLGALEKP ETVPKDTL VPEKCHGVMPS WPKSSS RRRTDHG+E PSEA  HAKNAYRM P EL +L KPS+ML +T
Subjt:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT

Query:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL
        G    VQAPYGA V +LKK+DRSPQQ +DR TQSKLTVRRK PLPMLTRR DC RGVKHLPKSD RP+QCRVRTT+AKGLE++ V+RHE YEFPVVPL L
Subjt:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL

Query:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK
        TDAKGGKC SVQGQ+S L HV E HQGGSSREEDTQW ENLKC++AFNGSKQ MIEGPSLG VDATKTPEVEAEQ SCVL EYLHHCVD  QKNWVQLLK
Subjt:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK

Query:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI
        VAQFGHSAQTDSPSK SPFEIK KRHPVL PLADGPYV D PQVHR EEEWEQMADIARVCLEEAS+PMEE VDRERCPLESEWKTK PFNG   S   +
Subjt:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI

Query:  SAFSY
        S +++
Subjt:  SAFSY

TYK14059.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]1.3e-19987.03Show/hide
Query:  MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR
        MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR
Subjt:  MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR

Query:  SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK
        SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCR                                 
Subjt:  SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK

Query:  GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF
                GQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF
Subjt:  GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF

Query:  GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFS
        GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNG   S   +S ++
Subjt:  GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFS

Query:  Y
        +
Subjt:  Y

TrEMBL top hitse value%identityAlignment
A0A5A7ST07 Retrotrans_gag domain-containing protein4.3e-18880.49Show/hide
Query:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT
        MIS MQLDESR Q EPP +EILLGALEKP ETVPKDT+ VPEKCHGVMPS WPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTP ELARLRKPSKMLWNT
Subjt:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT

Query:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL
        GFCRSVQAPYGAHVPALKKRDRSPQQHIDR TQSKL+VRRKCPLPMLTRR D P GVKHLPKSD RP+QCRVRTT+AKGLEK+ V+RHE YEFP+ PL L
Subjt:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL

Query:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK
        TDAKGGKCCSVQGQ+S L HVGE HQGGSSREEDTQW ENL+C++AFNGSKQ +IEGPSLGAVDATKTPEV+AEQ SCVL E+LHHCVD RQKNWVQ  K
Subjt:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK

Query:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI
        V QFGHSAQTDSPSKRSPFEI+DKRH VL P+ADGP++ D PQVHR  EE EQMA+IARVCLEE S+PMEE  D++RCPLE E  T LP +G       +
Subjt:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI

Query:  SAFSY
        S +++
Subjt:  SAFSY

A0A5A7TU58 Retrotrans_gag domain-containing protein3.7e-19271.87Show/hide
Query:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT
        MISAMQLDESR Q+EPP +EILLG LEKP ETVP+DT  VP+K HGVMPSSWPK SS RRRTDH ++ PSEAKAHAKNAYRM P EL RLRKPS++L NT
Subjt:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT

Query:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL
        G    VQAPYGA V +LKK+DRSPQQ +DR TQSKLTVRRKCP PMLTR+ DCPRGVKHLPKSDDRP+QCRVRTT+AKGLEKHYVSRHE Y+FPVVPLSL
Subjt:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL

Query:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK
        TDAKGGKCC VQ QMSVLSHVGECHQGGSSREEDTQW ENL+CQ+AFNGSKQAMIEGPSLG VDATKTPEVEAEQ S VL EYLHHCVD RQKNWVQLL+
Subjt:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK

Query:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI
        V QF HSAQTDS  KRSPFEIK KRH VL P+AD PYV D PQVHR  EE EQMA+IARVCLEEAS+PMEE  D++R PLE E  TKLP +        +
Subjt:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI

Query:  SAFSYASLPRPKFSICTIV--------------------------GRLRHTASLSADSDYRTTDLLIELSKCRTIVLRSYDCDIEHS
        S +++  + + K  + T +                          GRLRHT SLSADS++RT DLLIELSKCRTIVLRSYDCD + +
Subjt:  SAFSYASLPRPKFSICTIV--------------------------GRLRHTASLSADSDYRTTDLLIELSKCRTIVLRSYDCDIEHS

A0A5A7TV96 RNA-directed DNA polymerase-like protein1.1e-23197.26Show/hide
Query:  MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR
        MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR
Subjt:  MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR

Query:  SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK
        SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK
Subjt:  SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK

Query:  GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF
        GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF
Subjt:  GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF

Query:  GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFS
        GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNG   S   +S ++
Subjt:  GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFS

Query:  Y
        +
Subjt:  Y

A0A5A7UNY3 Reverse transcriptase3.4e-18580.74Show/hide
Query:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT
        MISAMQLDESR Q+EPP +EILLGALEKP ETVPKDTL VPEKCHGVMPS WPKSSS RRRTDHG+E PSEA  HAKNAYRM P EL +L KPS+ML +T
Subjt:  MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNT

Query:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL
        G    VQAPYGA V +LKK+DRSPQQ +DR TQSKLTVRRK PLPMLTRR DC RGVKHLPKSD RP+QCRVRTT+AKGLE++ V+RHE YEFPVVPL L
Subjt:  GFCRSVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSL

Query:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK
        TDAKGGKC SVQGQ+S L HV E HQGGSSREEDTQW ENLKC++AFNGSKQ MIEGPSLG VDATKTPEVEAEQ SCVL EYLHHCVD  QKNWVQLLK
Subjt:  TDAKGGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLK

Query:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI
        VAQFGHSAQTDSPSK SPFEIK KRHPVL PLADGPYV D PQVHR EEEWEQMADIARVCLEEAS+PMEE VDRERCPLESEWKTK PFNG   S   +
Subjt:  VAQFGHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDI

Query:  SAFSY
        S +++
Subjt:  SAFSY

A0A5D3CUZ1 RNA-directed DNA polymerase-like protein6.3e-20087.03Show/hide
Query:  MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR
        MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR
Subjt:  MQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCR

Query:  SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK
        SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCR                                 
Subjt:  SVQAPYGAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAK

Query:  GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF
                GQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF
Subjt:  GGKCCSVQGQMSVLSHVGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQF

Query:  GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFS
        GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNG   S   +S ++
Subjt:  GHSAQTDSPSKRSPFEIKDKRHPVLSPLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFS

Query:  Y
        +
Subjt:  Y

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCGGCCATGCAACTAGACGAGAGTCGCACCCAAAAAGAACCACCACCTATGGAGATCCTGCTTGGGGCGTTGGAAAAGCCGAGGGAGACAGTCCCTAAGGACAC
TCTGGGTGTCCCAGAGAAGTGCCATGGTGTGATGCCAAGTAGTTGGCCCAAGTCCTCGTCGAGGCGAAGGAGGACCGACCATGGGATAGAGCCGCCGTCAGAGGCAAAAG
CGCATGCAAAGAATGCTTATCGCATGACGCCGCTGGAGTTAGCCAGACTTCGGAAACCATCAAAGATGCTGTGGAATACAGGATTTTGTAGATCTGTACAAGCTCCTTAT
GGAGCCCATGTCCCTGCCCTAAAGAAGAGGGACAGAAGCCCACAACAGCATATTGACCGTCATACCCAGAGTAAGCTCACGGTCCGGCGTAAATGTCCACTCCCCATGCT
CACGAGGCGGGGGGACTGCCCACGTGGAGTGAAGCATCTTCCAAAGTCAGACGACCGACCGAAGCAATGTCGAGTAAGAACAACGGAGGCAAAGGGACTCGAGAAACATT
ATGTCTCTAGACATGAAGAATACGAGTTCCCCGTGGTGCCGCTTAGTCTTACTGATGCCAAGGGAGGAAAGTGTTGTTCTGTGCAGGGTCAGATGAGCGTGCTGAGTCAT
GTGGGGGAGTGCCACCAAGGTGGGTCGTCGAGAGAAGAAGACACTCAGTGGAGAGAGAACCTCAAGTGTCAGCTCGCCTTCAATGGTTCAAAGCAAGCCATGATCGAGGG
GCCAAGTCTTGGGGCCGTCGATGCGACCAAGACTCCTGAAGTTGAAGCCGAACAATTCAGTTGCGTGCTCGGAGAATACCTGCATCATTGTGTTGATGACAGACAAAAGA
ATTGGGTTCAACTGCTGAAGGTAGCCCAATTCGGTCATAGTGCTCAAACAGACTCGCCGAGCAAGAGAAGTCCGTTTGAGATTAAAGATAAGAGGCATCCTGTATTGTCG
CCTCTCGCTGATGGTCCTTATGTAGAGGACTGCCCTCAAGTTCACAGATTTGAGGAGGAATGGGAACAGATGGCCGACATCGCTCGAGTGTGCCTAGAAGAAGCTTCAAA
GCCGATGGAGGAGGGGGTAGATCGAGAGCGATGCCCTCTTGAGTCCGAGTGGAAGACCAAGCTCCCATTTAACGGTGTCGCCGAGTCACAGTGTGACATTTCGGCTTTTT
CATATGCAAGCTTGCCAAGACCAAAATTCTCAATATGTACTATAGTGGGGAGGCTACGTCATACCGCGAGTTTGTCCGCGGATTCCGATTATCGAACGACTGACTTGCTG
ATTGAGCTAAGCAAGTGCCGCACAATCGTGTTGAGAAGTTACGATTGTGACATTGAGCATAGCGCCATGGAGCGTTATAATGCCCTTGTTATCTCTTCTCTAACCTACAA
ACATTACAAGAAAGAGGGGGTATACCGATGCATAGATGTGTCGGCAGAAGCCAGGAATGACGTCATGAGAAATGCGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATATCGGCCATGCAACTAGACGAGAGTCGCACCCAAAAAGAACCACCACCTATGGAGATCCTGCTTGGGGCGTTGGAAAAGCCGAGGGAGACAGTCCCTAAGGACAC
TCTGGGTGTCCCAGAGAAGTGCCATGGTGTGATGCCAAGTAGTTGGCCCAAGTCCTCGTCGAGGCGAAGGAGGACCGACCATGGGATAGAGCCGCCGTCAGAGGCAAAAG
CGCATGCAAAGAATGCTTATCGCATGACGCCGCTGGAGTTAGCCAGACTTCGGAAACCATCAAAGATGCTGTGGAATACAGGATTTTGTAGATCTGTACAAGCTCCTTAT
GGAGCCCATGTCCCTGCCCTAAAGAAGAGGGACAGAAGCCCACAACAGCATATTGACCGTCATACCCAGAGTAAGCTCACGGTCCGGCGTAAATGTCCACTCCCCATGCT
CACGAGGCGGGGGGACTGCCCACGTGGAGTGAAGCATCTTCCAAAGTCAGACGACCGACCGAAGCAATGTCGAGTAAGAACAACGGAGGCAAAGGGACTCGAGAAACATT
ATGTCTCTAGACATGAAGAATACGAGTTCCCCGTGGTGCCGCTTAGTCTTACTGATGCCAAGGGAGGAAAGTGTTGTTCTGTGCAGGGTCAGATGAGCGTGCTGAGTCAT
GTGGGGGAGTGCCACCAAGGTGGGTCGTCGAGAGAAGAAGACACTCAGTGGAGAGAGAACCTCAAGTGTCAGCTCGCCTTCAATGGTTCAAAGCAAGCCATGATCGAGGG
GCCAAGTCTTGGGGCCGTCGATGCGACCAAGACTCCTGAAGTTGAAGCCGAACAATTCAGTTGCGTGCTCGGAGAATACCTGCATCATTGTGTTGATGACAGACAAAAGA
ATTGGGTTCAACTGCTGAAGGTAGCCCAATTCGGTCATAGTGCTCAAACAGACTCGCCGAGCAAGAGAAGTCCGTTTGAGATTAAAGATAAGAGGCATCCTGTATTGTCG
CCTCTCGCTGATGGTCCTTATGTAGAGGACTGCCCTCAAGTTCACAGATTTGAGGAGGAATGGGAACAGATGGCCGACATCGCTCGAGTGTGCCTAGAAGAAGCTTCAAA
GCCGATGGAGGAGGGGGTAGATCGAGAGCGATGCCCTCTTGAGTCCGAGTGGAAGACCAAGCTCCCATTTAACGGTGTCGCCGAGTCACAGTGTGACATTTCGGCTTTTT
CATATGCAAGCTTGCCAAGACCAAAATTCTCAATATGTACTATAGTGGGGAGGCTACGTCATACCGCGAGTTTGTCCGCGGATTCCGATTATCGAACGACTGACTTGCTG
ATTGAGCTAAGCAAGTGCCGCACAATCGTGTTGAGAAGTTACGATTGTGACATTGAGCATAGCGCCATGGAGCGTTATAATGCCCTTGTTATCTCTTCTCTAACCTACAA
ACATTACAAGAAAGAGGGGGTATACCGATGCATAGATGTGTCGGCAGAAGCCAGGAATGACGTCATGAGAAATGCGTCGTGA
Protein sequenceShow/hide protein sequence
MISAMQLDESRTQKEPPPMEILLGALEKPRETVPKDTLGVPEKCHGVMPSSWPKSSSRRRRTDHGIEPPSEAKAHAKNAYRMTPLELARLRKPSKMLWNTGFCRSVQAPY
GAHVPALKKRDRSPQQHIDRHTQSKLTVRRKCPLPMLTRRGDCPRGVKHLPKSDDRPKQCRVRTTEAKGLEKHYVSRHEEYEFPVVPLSLTDAKGGKCCSVQGQMSVLSH
VGECHQGGSSREEDTQWRENLKCQLAFNGSKQAMIEGPSLGAVDATKTPEVEAEQFSCVLGEYLHHCVDDRQKNWVQLLKVAQFGHSAQTDSPSKRSPFEIKDKRHPVLS
PLADGPYVEDCPQVHRFEEEWEQMADIARVCLEEASKPMEEGVDRERCPLESEWKTKLPFNGVAESQCDISAFSYASLPRPKFSICTIVGRLRHTASLSADSDYRTTDLL
IELSKCRTIVLRSYDCDIEHSAMERYNALVISSLTYKHYKKEGVYRCIDVSAEARNDVMRNAS