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MELO3C032030 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032030
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr06:13844984..13845537
RNA-Seq ExpressionMELO3C032030
SyntenyMELO3C032030
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049761.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]3.1e-3888.3Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GGHV+DSSRCSLAPKTVEA ICTQNWLNSDPI LQ QHELEEASKFE+GF V+MENEKE QDLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

TYK12117.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.1e-3888.3Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GGHV+DSSRCSLAPKTVEA ICTQNWLNSDPI LQ QHELEEASKFE+GF V+MENEKE QDLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

TYK20578.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]5.3e-3889.36Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GG V+DSSRCSLAPKTVEALICTQNWLNSDPI LQ QHELEEASKFE+GF VVMENEKEL+DLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

TYK23433.1 putative transposase [Cucumis melo var. makuwa]5.3e-3889.36Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GG V+DSSRCSLAPKTVEALICTQNWLNSDPI LQ QHELEEASKFE+GF VVMENEKEL+DLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

TYK28262.1 transposase [Cucumis melo var. makuwa]1.8e-3890.43Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GG V+DSSRCSLAPKTVEALICTQNWLNSDPI LQ QHELEEASKFE+GF VVMENEKELQDLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

TrEMBL top hitse value%identityAlignment
A0A5A7U843 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-3888.3Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GGHV+DSSRCSLAPKTVEA ICTQNWLNSDPI LQ QHELEEASKFE+GF V+MENEKE QDLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

A0A5D3CJE5 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.5e-3888.3Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GGHV+DSSRCSLAPKTVEA ICTQNWLNSDPI LQ QHELEEASKFE+GF V+MENEKE QDLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.6e-3889.36Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GG V+DSSRCSLAPKTVEALICTQNWLNSDPI LQ QHELEEASKFE+GF VVMENEKEL+DLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.6e-3889.36Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GG V+DSSRCSLAPKTVEALICTQNWLNSDPI LQ QHELEEASKFE+GF VVMENEKEL+DLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

A0A5D3DXL6 Transposase8.9e-3990.43Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD
        MARDILAIPVSTVASE  FS GG V+DSSRCSLAPKTVEALICTQNWLNSDPI LQ QHELEEASKFE+GF VVMENEKELQDLPDFDKLSITD
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase2.7e-0860.42Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWL
        +ARD+LAI VSTVASE  FS GG V+D  R  L  + VEALICT++W+
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWL

P08770 Putative AC transposase2.7e-0860.42Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWL
        +ARD+LAI VSTVASE  FS GG V+D  R  L  + VEALICT++W+
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWL

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 43.6e-0547.27Show/hide
Query:  MARDILAIPVSTV---ASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDP
        MARD+LAIP+STV   +S      G   +D  R SL P+ VEAL+C ++WL   P
Subjt:  MARDILAIPVSTV---ASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 37.3e-0646.43Show/hide
Query:  MARDILAIPVSTVASELTF----SIGGHVIDSSRCSLAPKTVEALICTQNWLNSDP
        MARD+LAIP+S V+S  +     + G  ++D  R SL P+TVEAL C ++WL   P
Subjt:  MARDILAIPVSTVASELTF----SIGGHVIDSSRCSLAPKTVEALICTQNWLNSDP

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER3.3e-0652.08Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWL
        MARDIL+IPVS  A +  F +    +D  + SL P+TVEALIC + WL
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWL

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain2.3e-0752.08Show/hide
Query:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWL
        MARDIL+IPVS  A +  F +    +D  + SL P+TVEALIC + WL
Subjt:  MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGAGATATTTTGGCTATTCCAGTTTCTACTGTAGCGTCTGAGTTGACTTTTAGTATTGGAGGACATGTTATTGACTCATCACGCTGCTCATTGGCTCCT
AAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATAGATCTTCAAATTCAACATGAATTGGAAGAGGCTTCAAAATTTGAAAAAGGA
TTTTGGGTGGTTATGGAGAATGAAAAAGAGCTTCAAGACCTTCCAGATTTTGATAAGTTGTCAATTACCGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGAGATATTTTGGCTATTCCAGTTTCTACTGTAGCGTCTGAGTTGACTTTTAGTATTGGAGGACATGTTATTGACTCATCACGCTGCTCATTGGCTCCT
AAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATAGATCTTCAAATTCAACATGAATTGGAAGAGGCTTCAAAATTTGAAAAAGGA
TTTTGGGTGGTTATGGAGAATGAAAAAGAGCTTCAAGACCTTCCAGATTTTGATAAGTTGTCAATTACCGACTAGACAATTATTAACTAATTCTGATTCAAAACT
TGTAATATTTCTATCGACTAGACTATCATAGTGTTTATGTTTGATACTTCGGTTGTATTTGTGACTCTTAATAGTAATGTGGTGAAGTGAATTGAACTTAGATGT
ATTTGTAACTCTTAATTGTATTTTTTATTTCATTTT
Protein sequenceShow/hide protein sequence
MARDILAIPVSTVASELTFSIGGHVIDSSRCSLAPKTVEALICTQNWLNSDPIDLQIQHELEEASKFEKGFWVVMENEKELQDLPDFDKLSITD