; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C032045 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032045
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr06:14954755..14960383
RNA-Seq ExpressionMELO3C032045
SyntenyMELO3C032045
Gene Ontology termsGO:0016829 - lyase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034802.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]1.0e-0458.14Show/hide
Query:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVS
        QP+G DC +++G V++V ++ L+FPS+RLGIVSRD  SM RVS
Subjt:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVS
KAA0060075.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.4e-0966.67Show/hide
Query:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESK
        QPYG DCLVH+GRV++VSS+  +FPS+R GI+S DRAS  RVS+ RYEE K
Subjt:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESK
TYK05494.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.7e-0555.93Show/hide
Query:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESKVEILVLVP
        Q YG  C VHRG VI VSS+CL+ PSYRL           +VSS RY +SKVEI+VL P
Subjt:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESKVEILVLVP
TrEMBL top hitse value%identityAlignment
A0A5A7SUE4 (R)-mandelonitrile lyase 1-like5.0e-0558.14Show/hide
Query:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVS
        QP+G DC +++G V++V ++ L+FPS+RLGIVSRD  SM RVS
Subjt:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVS
A0A5A7V2H2 NBS-LRR type resistance protein1.1e-0966.67Show/hide
Query:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESK
        QPYG DCLVH+GRV++VSS+  +FPS+R GI+S DRAS  RVS+ RYEE K
Subjt:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESK
A0A5D3C2H5 Transposon Ty3-G Gag-Pol polyprotein1.3e-0555.93Show/hide
Query:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESKVEILVLVP
        Q YG  C VHRG VI VSS+CL+ PSYRL           +VSS RY +SKVEI+VL P
Subjt:  QPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESKVEILVLVP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAGCCCGCTCCGTAGTTAGTACAAACGATGTAATCCTGAATCGTTCATGTAGAGACATGGGAGTGGGGGCGTCCTATCAACCCTACGGGAGAGATTGT
CTTGTGCACAGAGGTCGTGTGATAAAGGTATCAAGTAAATGCCTACAGTTTCCATCATATAGACTAGGTATTGTATCGAGGGATAGAGCTTCCATGCATAGAGTT
TCGTCCCATAGATATGAAGAGTCCAAGGTAGAGATTCTGGTTCTGGTGCCTAGTTACAACTTAAGCAGGGTTGACAGGTTCTCCAAAGTTTATGAGCAATTCTAT
GATACCGTCCAAATGAACTTTATTTATCCTTCAAATCCCACCAAAAGTATGATTTTCCTAAATATTTACACTATGGTGCGAATGGAGCAGCAAGGCGGACATGGC
GATGACATTAAGCAACCTCTCGGTGCTTTCGCAACACATATTGTGCATTTCTATAATATATGCAAGGGACAAATTCAACGACAAGATTATATTACTACAATCTCA
TCGGTGCATAGGTTTATCGAATACGTACCTTCAAAGCCTCCCGATCCTCGTAATCTCCTCACTGACTCGAAGCCAGGACCACCACTATGTGAAGGAAATCGAGAG
AGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAGCCCGCTCCGTAGTTAGTACAAACGATGTAATCCTGAATCGTTCATGTAGAGACATGGGAGTGGGGGCGTCCTATCAACCCTACGGGAGAGATTGT
CTTGTGCACAGAGGTCGTGTGATAAAGGTATCAAGTAAATGCCTACAGTTTCCATCATATAGACTAGGTATTGTATCGAGGGATAGAGCTTCCATGCATAGAGTT
TCGTCCCATAGATATGAAGAGTCCAAGGTAGAGATTCTGGTTCTGGTGCCTAGTTACAACTTAAGCAGGGTTGACAGGTTCTCCAAAGTTTATGAGCAATTCTAT
GATACCGTCCAAATGAACTTTATTTATCCTTCAAATCCCACCAAAAGTATGATTTTCCTAAATATTTACACTATGGTGCGAATGGAGCAGCAAGGCGGACATGGC
GATGACATTAAGCAACCTCTCGGTGCTTTCGCAACACATATTGTGCATTTCTATAATATATGCAAGGGACAAATTCAACGACAAGATTATATTACTACAATCTCA
TCGGTGCATAGGTTTATCGAATACGTACCTTCAAAGCCTCCCGATCCTCGTAATCTCCTCACTGACTCGAAGCCAGGACCACCACTATGTGAAGGAAATCGAGAG
AGATGA
Protein sequenceShow/hide protein sequence
MDAARSVVSTNDVILNRSCRDMGVGASYQPYGRDCLVHRGRVIKVSSKCLQFPSYRLGIVSRDRASMHRVSSHRYEESKVEILVLVPSYNLSRVDRFSKVYEQFY
DTVQMNFIYPSNPTKSMIFLNIYTMVRMEQQGGHGDDIKQPLGAFATHIVHFYNICKGQIQRQDYITTISSVHRFIEYVPSKPPDPRNLLTDSKPGPPLCEGNRE
R